RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 KRTAP9-4Q9BYQ2 154 aa4.2□□□□□ -1.74
HDAC1-205ENST00000472928 KRTAP26-1Q6PEX3 210 aa4.19□□□□□ -1.74
HDAC1-205ENST00000472928 Q8IZM0 81 aa4.19□□□□□ -1.74
HDAC1-205ENST00000472928 OR13C6PQ8NH95 151 aa4.19□□□□□ -1.74
HDAC1-205ENST00000472928 ZNF625Q96I27 306 aaPredicted RBP4.19□□□□□ -1.74
HDAC1-205ENST00000472928 A0A0J9YXY3 114 aa4.18□□□□□ -1.74
HDAC1-205ENST00000472928 UQCRQO14949 82 aa4.18□□□□□ -1.74
HDAC1-205ENST00000472928 SRSF9Q13242 221 aaKnown RBP eCLIP4.18□□□□□ -1.74
HDAC1-205ENST00000472928 HIGD2BQ4VC39 106 aa4.18□□□□□ -1.74
HDAC1-205ENST00000472928 C10orf25Q5T742 122 aa4.18□□□□□ -1.74
HDAC1-205ENST00000472928 C3orf22Q8N5N4 141 aa4.18□□□□□ -1.74
HDAC1-205ENST00000472928 C15orf56Q8N910 161 aa4.18□□□□□ -1.74
HDAC1-205ENST00000472928 LINC00526Q96FQ7 95 aa4.18□□□□□ -1.74
HDAC1-205ENST00000472928 KRTAP9-3Q9BYQ3 159 aa4.18□□□□□ -1.74
HDAC1-205ENST00000472928 TRBV10-2A0A0K0K1G8 114 aa4.17□□□□□ -1.74
HDAC1-205ENST00000472928 C9JAW5 83 aa4.17□□□□□ -1.74
HDAC1-205ENST00000472928 ACYP1P07311 99 aa4.17□□□□□ -1.74
HDAC1-205ENST00000472928 CXCL5P42830 114 aa4.17□□□□□ -1.74
HDAC1-205ENST00000472928 ATXN8Q156A1 80 aa4.17□□□□□ -1.74
HDAC1-205ENST00000472928 C6orf226Q5I0X4 101 aa4.17□□□□□ -1.74
HDAC1-205ENST00000472928 SFTA2Q6UW10 78 aa4.17□□□□□ -1.74
HDAC1-205ENST00000472928 C2orf82Q6UX34 121 aa4.17□□□□□ -1.74
HDAC1-205ENST00000472928 NTN5Q8WTR8 489 aaPredicted RBP4.17□□□□□ -1.74
HDAC1-205ENST00000472928 PRO1854Q9UHT4 67 aa4.17□□□□□ -1.74
HDAC1-205ENST00000472928 A0A087WTM6 91 aa4.16□□□□□ -1.74
HDAC1-205ENST00000472928 GVQW2A0A096LPI5 108 aaPredicted RBP4.16□□□□□ -1.74
HDAC1-205ENST00000472928 A0A0B4J2C4 111 aa4.16□□□□□ -1.74
HDAC1-205ENST00000472928 A0A0U1RRA0 63 aa4.16□□□□□ -1.74
HDAC1-205ENST00000472928 H3BT86 120 aa4.16□□□□□ -1.74
HDAC1-205ENST00000472928 LECT2O14960 151 aa4.16□□□□□ -1.74
HDAC1-205ENST00000472928 PSCAO43653 123 aa4.16□□□□□ -1.74
HDAC1-205ENST00000472928 TIMM17BO60830 172 aa4.16□□□□□ -1.74
HDAC1-205ENST00000472928 CFC1BP0CG36 223 aa4.16□□□□□ -1.74
HDAC1-205ENST00000472928 CFC1P0CG37 223 aa4.16□□□□□ -1.74
HDAC1-205ENST00000472928 KIAA0087Q14695 138 aa4.16□□□□□ -1.74
HDAC1-205ENST00000472928 LINC01620Q4KN68 170 aa4.16□□□□□ -1.74
HDAC1-205ENST00000472928 MPLKIPQ8TAP9 179 aa4.16□□□□□ -1.74
HDAC1-205ENST00000472928 LITAFQ99732 161 aa4.16□□□□□ -1.74
HDAC1-205ENST00000472928 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.15□□□□□ -1.75
HDAC1-205ENST00000472928 NPC2P61916 151 aa4.15□□□□□ -1.75
HDAC1-205ENST00000472928 CIRBPQ14011 172 aaKnown RBP4.15□□□□□ -1.75
HDAC1-205ENST00000472928 C9orf153Q5TBE3 101 aa4.15□□□□□ -1.75
HDAC1-205ENST00000472928 FAM19A5Q7Z5A7 132 aaPredicted RBP4.15□□□□□ -1.75
HDAC1-205ENST00000472928 DAND5Q8N907 189 aa4.15□□□□□ -1.75
HDAC1-205ENST00000472928 CAMK2N2Q96S95 79 aa4.15□□□□□ -1.75
HDAC1-205ENST00000472928 TNXBP22105 4242 aa4.14□□□□□ -1.75
HDAC1-205ENST00000472928 TRBV30A0A0K0K1B3 111 aa4.14□□□□□ -1.75
HDAC1-205ENST00000472928 A4D1N5 150 aa4.14□□□□□ -1.75
HDAC1-205ENST00000472928 CRYGAP11844 174 aa4.14□□□□□ -1.75
HDAC1-205ENST00000472928 PFN2P35080 140 aa4.14□□□□□ -1.75
HDAC1-205ENST00000472928 LINC00158P58513 81 aa4.14□□□□□ -1.75
HDAC1-205ENST00000472928 ADAMTSL4-AS1Q5T5F5 129 aa4.14□□□□□ -1.75
HDAC1-205ENST00000472928 UNQ6190/PRO20217Q6UXQ8 127 aa4.14□□□□□ -1.75
HDAC1-205ENST00000472928 C9orf116Q5BN46 136 aaPredicted RBP4.13□□□□□ -1.75
HDAC1-205ENST00000472928 Q6ZRU5 148 aa4.13□□□□□ -1.75
HDAC1-205ENST00000472928 MIR7-3HGQ8N6C7 128 aa4.13□□□□□ -1.75
HDAC1-205ENST00000472928 C2orf48Q96LS8 159 aa4.13□□□□□ -1.75
HDAC1-205ENST00000472928 C6orf48Q9UBA6 75 aa4.13□□□□□ -1.75
HDAC1-205ENST00000472928 F8WDY8 70 aa4.12□□□□□ -1.75
HDAC1-205ENST00000472928 COX7CP15954 63 aa4.12□□□□□ -1.75
HDAC1-205ENST00000472928 KRTAP10-4P60372 401 aaPredicted RBP4.12□□□□□ -1.75
HDAC1-205ENST00000472928 SYCNQ0VAF6 134 aa4.12□□□□□ -1.75
HDAC1-205ENST00000472928 C14orf177Q52M58 125 aa4.12□□□□□ -1.75
HDAC1-205ENST00000472928 GAGE2AQ6NT46 116 aa4.12□□□□□ -1.75
HDAC1-205ENST00000472928 LINC00643Q86TS7 51 aa4.12□□□□□ -1.75
HDAC1-205ENST00000472928 MUSTN1Q8IVN3 82 aa4.12□□□□□ -1.75
HDAC1-205ENST00000472928 LINC00308Q8TCZ7 52 aa4.12□□□□□ -1.75
HDAC1-205ENST00000472928 COPS9Q8WXC6 57 aa4.12□□□□□ -1.75
HDAC1-205ENST00000472928 IGLV5-52A0A0A0MRZ9 124 aa4.11□□□□□ -1.75
HDAC1-205ENST00000472928 LOC107984640A0A0U1RRK4 108 aa4.11□□□□□ -1.75
HDAC1-205ENST00000472928 TEX49A0A1B0GTD5 131 aa4.11□□□□□ -1.75
HDAC1-205ENST00000472928 FAM236AA0A1B0GUQ0 79 aa4.11□□□□□ -1.75
HDAC1-205ENST00000472928 FAM236BA0A1B0GV22 79 aa4.11□□□□□ -1.75
HDAC1-205ENST00000472928 TMEM258P61165 79 aa4.11□□□□□ -1.75
HDAC1-205ENST00000472928 COX17Q14061 63 aa4.11□□□□□ -1.75
HDAC1-205ENST00000472928 SOSTDC1Q6X4U4 206 aa4.11□□□□□ -1.75
HDAC1-205ENST00000472928 SDIM1Q6ZPB5 146 aa4.11□□□□□ -1.75
HDAC1-205ENST00000472928 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.1□□□□□ -1.75
HDAC1-205ENST00000472928 ATOX1O00244 68 aa4.1□□□□□ -1.75
HDAC1-205ENST00000472928 OXTP01178 125 aa4.1□□□□□ -1.75
HDAC1-205ENST00000472928 TRACP01848 142 aa4.1□□□□□ -1.75
HDAC1-205ENST00000472928 COX6CP09669 75 aa4.1□□□□□ -1.75
HDAC1-205ENST00000472928 RPL18AQ02543 176 aaKnown RBP4.1□□□□□ -1.75
HDAC1-205ENST00000472928 Q6ZSA8 131 aa4.1□□□□□ -1.75
HDAC1-205ENST00000472928 SND1-IT1Q9HBX3 110 aa4.1□□□□□ -1.75
HDAC1-205ENST00000472928 LRCOL1A6NCL2 159 aa4.09□□□□□ -1.75
HDAC1-205ENST00000472928 HIST1H4AP62805 103 aaKnown RBP4.09□□□□□ -1.75
HDAC1-205ENST00000472928 NDUFC2-KCTD14E9PQ53 114 aa4.08□□□□□ -1.76
HDAC1-205ENST00000472928 LST1O00453 97 aa4.08□□□□□ -1.76
HDAC1-205ENST00000472928 CNBPP62633 177 aaKnown RBP4.08□□□□□ -1.76
HDAC1-205ENST00000472928 Q8N814 137 aa4.08□□□□□ -1.76
HDAC1-205ENST00000472928 DPH3Q96FX2 82 aa4.08□□□□□ -1.76
HDAC1-205ENST00000472928 XAGE1AQ9HD64 81 aa4.08□□□□□ -1.76
HDAC1-205ENST00000472928 H7C2G1 150 aa4.07□□□□□ -1.76
HDAC1-205ENST00000472928 NCR3O14931 201 aa4.07□□□□□ -1.76
HDAC1-205ENST00000472928 Q1RN00 199 aa4.07□□□□□ -1.76
HDAC1-205ENST00000472928 Q6ZRP5 223 aa4.07□□□□□ -1.76
HDAC1-205ENST00000472928 TLX1NBP0CAT3 122 aa4.06□□□□□ -1.76
HDAC1-205ENST00000472928 MT1HL1P0DM35 61 aa4.06□□□□□ -1.76
HDAC1-205ENST00000472928 Q8NDZ9 215 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms