RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 SERTAD4-AS1Q5TG53 156 aa6.9□□□□□ -1.3
APLF-204ENST00000471727 IGLV1-50A0A075B6I6 118 aa6.9□□□□□ -1.31
APLF-204ENST00000471727 CXCL6P80162 114 aa6.9□□□□□ -1.31
APLF-204ENST00000471727 A0A1B0GW54 56 aa6.89□□□□□ -1.31
APLF-204ENST00000471727 SPRR1AP35321 89 aa6.89□□□□□ -1.31
APLF-204ENST00000471727 TENM3Q9P273 2699 aa6.88□□□□□ -1.31
APLF-204ENST00000471727 ETDCA0A1B0GVM5 59 aa6.88□□□□□ -1.31
APLF-204ENST00000471727 C14orf177Q52M58 125 aa6.88□□□□□ -1.31
APLF-204ENST00000471727 C9orf153Q5TBE3 101 aa6.88□□□□□ -1.31
APLF-204ENST00000471727 SERP2Q8N6R1 65 aa6.88□□□□□ -1.31
APLF-204ENST00000471727 PKD1L1Q8TDX9 2849 aa6.87□□□□□ -1.31
APLF-204ENST00000471727 CASC10Q5T4H9 136 aa6.87□□□□□ -1.31
APLF-204ENST00000471727 Q6ZRX8 168 aa6.87□□□□□ -1.31
APLF-204ENST00000471727 Q6ZVQ6 151 aa6.87□□□□□ -1.31
APLF-204ENST00000471727 KRTAP4-16G5E9R7 235 aaPredicted RBP6.87□□□□□ -1.31
APLF-204ENST00000471727 CRYGAP11844 174 aa6.87□□□□□ -1.31
APLF-204ENST00000471727 MRPL55Q7Z7F7 128 aaKnown RBP6.87□□□□□ -1.31
APLF-204ENST00000471727 PKIGQ9Y2B9 76 aa6.87□□□□□ -1.31
APLF-204ENST00000471727 BAHCC1Q9P281 2608 aa6.86□□□□□ -1.31
APLF-204ENST00000471727 LINC01547P58512 204 aaPredicted RBP6.86□□□□□ -1.31
APLF-204ENST00000471727 CNBPP62633 177 aaKnown RBP6.86□□□□□ -1.31
APLF-204ENST00000471727 B9D2Q9BPU9 175 aa6.86□□□□□ -1.31
APLF-204ENST00000471727 A0A087WVE0 104 aa6.85□□□□□ -1.31
APLF-204ENST00000471727 HAMPP81172 84 aa6.85□□□□□ -1.31
APLF-204ENST00000471727 UBE2DNLQ8IWF7 75 aa6.85□□□□□ -1.31
APLF-204ENST00000471727 SMIM20Q8N5G0 67 aa6.85□□□□□ -1.31
APLF-204ENST00000471727 APLNQ9ULZ1 77 aa6.85□□□□□ -1.31
APLF-204ENST00000471727 HUWE1Q7Z6Z7 4374 aaKnown RBP6.85□□□□□ -1.31
APLF-204ENST00000471727 IGLV5-48A0A075B6I7 105 aa6.84□□□□□ -1.31
APLF-204ENST00000471727 SS18L2Q9UHA2 77 aa6.84□□□□□ -1.31
APLF-204ENST00000471727 C16orf90A8MZG2 172 aa6.83□□□□□ -1.32
APLF-204ENST00000471727 M0R2N4 97 aa6.83□□□□□ -1.32
APLF-204ENST00000471727 PSCAO43653 123 aa6.83□□□□□ -1.32
APLF-204ENST00000471727 Q8N377 158 aa6.83□□□□□ -1.32
APLF-204ENST00000471727 COL6A5A8TX70 2615 aa6.83□□□□□ -1.32
APLF-204ENST00000471727 FAM19A1Q7Z5A9 133 aa6.83□□□□□ -1.32
APLF-204ENST00000471727 DNAH1Q9P2D7 4330 aa6.82□□□□□ -1.32
APLF-204ENST00000471727 FAM168BA1KXE4 195 aa6.82□□□□□ -1.32
APLF-204ENST00000471727 RPL37AP8A6NKH3 93 aa6.82□□□□□ -1.32
APLF-204ENST00000471727 NOTCH1P46531 2555 aa6.82□□□□□ -1.32
APLF-204ENST00000471727 REG3GQ6UW15 175 aa6.81□□□□□ -1.32
APLF-204ENST00000471727 FAM19A5Q7Z5A7 132 aaPredicted RBP6.81□□□□□ -1.32
APLF-204ENST00000471727 KRTAP7-1Q8IUC3 87 aa6.81□□□□□ -1.32
APLF-204ENST00000471727 NREPQ16612 68 aa6.8□□□□□ -1.32
APLF-204ENST00000471727 DEFB105AQ8NG35 78 aa6.8□□□□□ -1.32
APLF-204ENST00000471727 Q9BRP9 147 aa6.8□□□□□ -1.32
APLF-204ENST00000471727 NUPR2A6NF83 97 aa6.79□□□□□ -1.32
APLF-204ENST00000471727 FUSP35637 526 aaKnown RBP eCLIP6.79□□□□□ -1.32
APLF-204ENST00000471727 UBE2BP63146 152 aa6.79□□□□□ -1.32
APLF-204ENST00000471727 LCE2AQ5TA79 106 aaPredicted RBP6.79□□□□□ -1.32
APLF-204ENST00000471727 TRAV7A0A075B6U4 112 aa6.78□□□□□ -1.32
APLF-204ENST00000471727 TNP2Q05952 138 aa6.78□□□□□ -1.32
APLF-204ENST00000471727 KRTAP1-5Q9BYS1 174 aa6.78□□□□□ -1.32
APLF-204ENST00000471727 NBEAL1Q6ZS30 2694 aa6.77□□□□□ -1.33
APLF-204ENST00000471727 A0A096LNI7 61 aa6.76□□□□□ -1.33
APLF-204ENST00000471727 LINC00474Q9P2X8 69 aa6.76□□□□□ -1.33
APLF-204ENST00000471727 C1orf137Q5JT78 98 aa6.76□□□□□ -1.33
APLF-204ENST00000471727 DYNC2H1Q8NCM8 4307 aaKnown RBP6.75□□□□□ -1.33
APLF-204ENST00000471727 NBDYA0A0U1RRE5 68 aa6.75□□□□□ -1.33
APLF-204ENST00000471727 F8WEM9 126 aa6.75□□□□□ -1.33
APLF-204ENST00000471727 TMEM258P61165 79 aa6.75□□□□□ -1.33
APLF-204ENST00000471727 Q8NBF4 154 aa6.75□□□□□ -1.33
APLF-204ENST00000471727 MDFIQ99750 246 aa6.75□□□□□ -1.33
APLF-204ENST00000471727 H0Y9J4 135 aa6.74□□□□□ -1.33
APLF-204ENST00000471727 BPY2O14599 106 aa6.74□□□□□ -1.33
APLF-204ENST00000471727 C9orf163Q8N9P6 203 aa6.74□□□□□ -1.33
APLF-204ENST00000471727 SPRR4Q96PI1 79 aa6.74□□□□□ -1.33
APLF-204ENST00000471727 MGAM2Q2M2H8 2515 aa6.74□□□□□ -1.33
APLF-204ENST00000471727 A0A1W2PNN7 141 aa6.73□□□□□ -1.33
APLF-204ENST00000471727 ST20-AS1Q8NBB2 130 aa6.73□□□□□ -1.33
APLF-204ENST00000471727 IGKV2-24A0A0C4DH68 120 aa6.72□□□□□ -1.33
APLF-204ENST00000471727 ERC2-IT1O76042 136 aa6.72□□□□□ -1.33
APLF-204ENST00000471727 DNAH9Q9NYC9 4486 aa6.72□□□□□ -1.33
APLF-204ENST00000471727 A0A1W2PNM2 257 aa6.72□□□□□ -1.33
APLF-204ENST00000471727 LRCOL1A6NCL2 159 aa6.72□□□□□ -1.33
APLF-204ENST00000471727 IGLV8-61A0A075B6I0 122 aa6.71□□□□□ -1.34
APLF-204ENST00000471727 RPS28P62857 69 aaKnown RBP6.71□□□□□ -1.34
APLF-204ENST00000471727 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.7□□□□□ -1.34
APLF-204ENST00000471727 C3orf84H3BNL1 204 aa6.7□□□□□ -1.34
APLF-204ENST00000471727 SCXQ7RTU7 201 aa6.7□□□□□ -1.34
APLF-204ENST00000471727 SMIM29Q86T20 159 aa6.7□□□□□ -1.34
APLF-204ENST00000471727 IGKV4-1P06312 121 aa6.69□□□□□ -1.34
APLF-204ENST00000471727 SPRR1BP22528 89 aa6.68□□□□□ -1.34
APLF-204ENST00000471727 KLKP1Q107X0 134 aa6.68□□□□□ -1.34
APLF-204ENST00000471727 Q6ZRN7 208 aaPredicted RBP6.68□□□□□ -1.34
APLF-204ENST00000471727 C20orf197Q8N268 126 aa6.68□□□□□ -1.34
APLF-204ENST00000471727 J3KT08 172 aa6.67□□□□□ -1.34
APLF-204ENST00000471727 NDUFC1O43677 76 aa6.67□□□□□ -1.34
APLF-204ENST00000471727 LINC00476Q8WZB0 136 aa6.67□□□□□ -1.34
APLF-204ENST00000471727 PHF5AQ7RTV0 110 aaKnown RBP6.66□□□□□ -1.34
APLF-204ENST00000471727 HIGD2AQ9BW72 106 aa6.66□□□□□ -1.34
APLF-204ENST00000471727 STAB2Q8WWQ8 2551 aa6.65□□□□□ -1.34
APLF-204ENST00000471727 UBE2AP49459 152 aa6.65□□□□□ -1.34
APLF-204ENST00000471727 PRLHP81277 87 aa6.65□□□□□ -1.34
APLF-204ENST00000471727 EPM2AB3EWF7 344 aa6.65□□□□□ -1.35
APLF-204ENST00000471727 CHTF8P0CG12 524 aa6.64□□□□□ -1.35
APLF-204ENST00000471727 IGFL1Q6UW32 110 aa6.64□□□□□ -1.35
APLF-204ENST00000471727 CYSTM1Q9H1C7 97 aa6.64□□□□□ -1.35
APLF-204ENST00000471727 Q8N9L7 120 aa6.62□□□□□ -1.35
APLF-204ENST00000471727 DPH3Q96FX2 82 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms