RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 RPS27P42677 84 aaKnown RBP1.76□□□□□ -2.13
SCN3A-207ENST00000471697 C5orf56Q8N8D9 126 aa1.76□□□□□ -2.13
SCN3A-207ENST00000471697 TP53AIP1Q9HCN2 124 aa1.76□□□□□ -2.13
SCN3A-207ENST00000471697 ATRXP46100 2492 aa1.76□□□□□ -2.13
SCN3A-207ENST00000471697 FN1P02751 2386 aaKnown RBP1.76□□□□□ -2.13
SCN3A-207ENST00000471697 KNL1Q8NG31 2342 aa1.75□□□□□ -2.13
SCN3A-207ENST00000471697 IGKV2-28A0A075B6P5 120 aa1.75□□□□□ -2.13
SCN3A-207ENST00000471697 IGKV2D-28P01615 120 aa1.75□□□□□ -2.13
SCN3A-207ENST00000471697 IGLV6-57P01721 117 aa1.75□□□□□ -2.13
SCN3A-207ENST00000471697 ANGP03950 147 aaKnown RBP1.75□□□□□ -2.13
SCN3A-207ENST00000471697 RPL37AP61513 92 aaKnown RBP1.75□□□□□ -2.13
SCN3A-207ENST00000471697 Q96NJ1 140 aa1.75□□□□□ -2.13
SCN3A-207ENST00000471697 EYSQ5T1H1 3165 aa1.75□□□□□ -2.13
SCN3A-207ENST00000471697 CHD8Q9HCK8 2581 aa1.74□□□□□ -2.13
SCN3A-207ENST00000471697 ASCC3Q8N3C0 2202 aaKnown RBP1.74□□□□□ -2.13
SCN3A-207ENST00000471697 H3BRN7 92 aa1.74□□□□□ -2.13
SCN3A-207ENST00000471697 LY6G6CO95867 125 aa1.74□□□□□ -2.13
SCN3A-207ENST00000471697 LINC00315P59091 139 aa1.74□□□□□ -2.13
SCN3A-207ENST00000471697 PRR9Q5T870 116 aa1.74□□□□□ -2.13
SCN3A-207ENST00000471697 CDKN2A-AS1Q9UH64 79 aa1.74□□□□□ -2.13
SCN3A-207ENST00000471697 SETXQ7Z333 2677 aaKnown RBP1.74□□□□□ -2.13
SCN3A-207ENST00000471697 CNTRLQ7Z7A1 2325 aa1.74□□□□□ -2.13
SCN3A-207ENST00000471697 TECTAO75443 2155 aa1.74□□□□□ -2.13
SCN3A-207ENST00000471697 LYNX1G3V0Z9 82 aa1.73□□□□□ -2.13
SCN3A-207ENST00000471697 RPL39P62891 51 aaKnown RBP1.73□□□□□ -2.13
SCN3A-207ENST00000471697 SPINK9Q5DT21 86 aa1.73□□□□□ -2.13
SCN3A-207ENST00000471697 CCL19Q99731 98 aa1.73□□□□□ -2.13
SCN3A-207ENST00000471697 CNOT1A5YKK6 2376 aaKnown RBP1.73□□□□□ -2.13
SCN3A-207ENST00000471697 CACNA1BQ00975 2339 aa1.72□□□□□ -2.13
SCN3A-207ENST00000471697 SPTY2D1-AS1A0A0U1RR47 76 aa1.72□□□□□ -2.13
SCN3A-207ENST00000471697 M0R2N4 97 aa1.72□□□□□ -2.13
SCN3A-207ENST00000471697 INE1O15225 51 aa1.72□□□□□ -2.13
SCN3A-207ENST00000471697 ANKRD17O75179 2603 aaKnown RBP1.72□□□□□ -2.13
SCN3A-207ENST00000471697 LINC00304Q8N9R0 145 aa1.71□□□□□ -2.14
SCN3A-207ENST00000471697 TMEM167AQ8TBQ9 72 aa1.71□□□□□ -2.14
SCN3A-207ENST00000471697 RPL39LQ96EH5 51 aaKnown RBP1.71□□□□□ -2.14
SCN3A-207ENST00000471697 DOPEY2Q9Y3R5 2298 aa1.71□□□□□ -2.14
SCN3A-207ENST00000471697 MKI67P46013 3256 aaKnown RBP1.71□□□□□ -2.14
SCN3A-207ENST00000471697 TRIOBPQ9H2D6 2365 aa1.7□□□□□ -2.14
SCN3A-207ENST00000471697 IGLV5-48A0A075B6I7 105 aa1.7□□□□□ -2.14
SCN3A-207ENST00000471697 IGKV2-24A0A0C4DH68 120 aa1.7□□□□□ -2.14
SCN3A-207ENST00000471697 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.7□□□□□ -2.14
SCN3A-207ENST00000471697 COX6B2Q6YFQ2 88 aa1.7□□□□□ -2.14
SCN3A-207ENST00000471697 SSBP3-AS1Q7Z2R9 100 aa1.7□□□□□ -2.14
SCN3A-207ENST00000471697 PIEZO1Q92508 2521 aa1.7□□□□□ -2.14
SCN3A-207ENST00000471697 LAMA2P24043 3122 aaKnown RBP1.69□□□□□ -2.14
SCN3A-207ENST00000471697 CFAP47Q6ZTR5 3102 aa1.69□□□□□ -2.14
SCN3A-207ENST00000471697 ABCA1O95477 2261 aa1.69□□□□□ -2.14
SCN3A-207ENST00000471697 ICE1Q9Y2F5 2266 aa1.69□□□□□ -2.14
SCN3A-207ENST00000471697 A0A096LNT2 108 aa1.69□□□□□ -2.14
SCN3A-207ENST00000471697 M0QY20 66 aa1.69□□□□□ -2.14
SCN3A-207ENST00000471697 PRB2P02812 416 aaPredicted RBP1.69□□□□□ -2.14
SCN3A-207ENST00000471697 IGFL1Q6UW32 110 aa1.69□□□□□ -2.14
SCN3A-207ENST00000471697 PLAC4Q8WY50 150 aa1.69□□□□□ -2.14
SCN3A-207ENST00000471697 FASNP49327 2511 aaKnown RBP1.69□□□□□ -2.14
SCN3A-207ENST00000471697 MAST4O15021 2626 aa1.69□□□□□ -2.14
SCN3A-207ENST00000471697 PLCE1Q9P212 2302 aa1.68□□□□□ -2.14
SCN3A-207ENST00000471697 K7EIM0 57 aa1.68□□□□□ -2.14
SCN3A-207ENST00000471697 C10orf99Q6UWK7 81 aa1.68□□□□□ -2.14
SCN3A-207ENST00000471697 Q6ZRX8 168 aa1.68□□□□□ -2.14
SCN3A-207ENST00000471697 BRCA2P51587 3418 aa1.68□□□□□ -2.14
SCN3A-207ENST00000471697 Q6ZRN7 208 aaPredicted RBP1.67□□□□□ -2.14
SCN3A-207ENST00000471697 CRIPTQ9P021 101 aa1.67□□□□□ -2.14
SCN3A-207ENST00000471697 TTC28Q96AY4 2481 aa1.67□□□□□ -2.14
SCN3A-207ENST00000471697 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
SCN3A-207ENST00000471697 NAV2Q8IVL1 2488 aa1.66□□□□□ -2.14
SCN3A-207ENST00000471697 BDP1A6H8Y1 2624 aa1.66□□□□□ -2.14
SCN3A-207ENST00000471697 PRB1P04280 392 aa1.66□□□□□ -2.14
SCN3A-207ENST00000471697 DEFB131AP59861 70 aa1.66□□□□□ -2.14
SCN3A-207ENST00000471697 WT1-ASQ06250 92 aa1.66□□□□□ -2.14
SCN3A-207ENST00000471697 MINOS1Q5TGZ0 78 aa1.66□□□□□ -2.14
SCN3A-207ENST00000471697 RANBP2P49792 3224 aaKnown RBP1.66□□□□□ -2.14
SCN3A-207ENST00000471697 DCHS1Q96JQ0 3298 aa1.65□□□□□ -2.15
SCN3A-207ENST00000471697 I3L2K1 104 aa1.65□□□□□ -2.15
SCN3A-207ENST00000471697 K7EQZ3 153 aa1.65□□□□□ -2.15
SCN3A-207ENST00000471697 C6orf48Q9UBA6 75 aa1.65□□□□□ -2.15
SCN3A-207ENST00000471697 USP9XQ93008 2570 aaPredicted RBP1.65□□□□□ -2.15
SCN3A-207ENST00000471697 TEP1Q99973 2627 aaKnown RBP1.65□□□□□ -2.15
SCN3A-207ENST00000471697 LAMA3Q16787 3333 aa1.65□□□□□ -2.15
SCN3A-207ENST00000471697 COL6A6A6NMZ7 2263 aa1.64□□□□□ -2.15
SCN3A-207ENST00000471697 FLNBO75369 2602 aaKnown RBP1.64□□□□□ -2.15
SCN3A-207ENST00000471697 G3V318 75 aa1.64□□□□□ -2.15
SCN3A-207ENST00000471697 COX6A2Q02221 97 aa1.64□□□□□ -2.15
SCN3A-207ENST00000471697 LEAP2Q969E1 77 aa1.64□□□□□ -2.15
SCN3A-207ENST00000471697 USMG5Q96IX5 58 aa1.64□□□□□ -2.15
SCN3A-207ENST00000471697 PRO3102Q9H379 93 aa1.64□□□□□ -2.15
SCN3A-207ENST00000471697 CACNA1EQ15878 2313 aa1.64□□□□□ -2.15
SCN3A-207ENST00000471697 CHD6Q8TD26 2715 aa1.64□□□□□ -2.15
SCN3A-207ENST00000471697 EPG5Q9HCE0 2579 aa1.63□□□□□ -2.15
SCN3A-207ENST00000471697 GVQW2A0A096LPI5 108 aaPredicted RBP1.63□□□□□ -2.15
SCN3A-207ENST00000471697 PRB3Q04118 309 aaPredicted RBP1.63□□□□□ -2.15
SCN3A-207ENST00000471697 SPINK13Q1W4C9 94 aa1.63□□□□□ -2.15
SCN3A-207ENST00000471697 RPL39P5Q59GN2 51 aa1.63□□□□□ -2.15
SCN3A-207ENST00000471697 KRTAP5-7Q6L8G8 165 aa1.63□□□□□ -2.15
SCN3A-207ENST00000471697 MRPL34Q9BQ48 92 aaKnown RBP1.63□□□□□ -2.15
SCN3A-207ENST00000471697 PRUNE2Q8WUY3 3088 aa1.63□□□□□ -2.15
SCN3A-207ENST00000471697 ALMS1Q8TCU4 4167 aa1.62□□□□□ -2.15
SCN3A-207ENST00000471697 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.62□□□□□ -2.15
SCN3A-207ENST00000471697 PTPN13Q12923 2485 aa1.62□□□□□ -2.15
SCN3A-207ENST00000471697 CFAP54Q96N23 3096 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms