RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 MACF1Q9UPN3 7388 aaKnown RBP0.25□□□□□ -2.37
SMC5-202ENST00000471372 LTN1O94822 1766 aa0.24□□□□□ -2.37
SMC5-202ENST00000471372 BSNQ9UPA5 3926 aa0.24□□□□□ -2.37
SMC5-202ENST00000471372 BVES-AS1Q5T3Y7 98 aa0.24□□□□□ -2.37
SMC5-202ENST00000471372 SPRR2DP22532 72 aa0.23□□□□□ -2.37
SMC5-202ENST00000471372 KMT2AQ03164 3969 aa0.23□□□□□ -2.37
SMC5-202ENST00000471372 HMCN2Q8NDA2 5059 aa0.22□□□□□ -2.37
SMC5-202ENST00000471372 PIK3C2BO00750 1634 aa0.22□□□□□ -2.37
SMC5-202ENST00000471372 APC2O95996 2303 aa0.22□□□□□ -2.37
SMC5-202ENST00000471372 WNK1Q9H4A3 2382 aa0.21□□□□□ -2.38
SMC5-202ENST00000471372 CEP170BQ9Y4F5 1589 aaPredicted RBP0.21□□□□□ -2.38
SMC5-202ENST00000471372 DEFB121Q5J5C9 76 aa0.21□□□□□ -2.38
SMC5-202ENST00000471372 DOT1LQ8TEK3 1739 aa0.21□□□□□ -2.38
SMC5-202ENST00000471372 WFDC13Q8IUB5 93 aa0.2□□□□□ -2.38
SMC5-202ENST00000471372 CREBBPQ92793 2442 aa0.2□□□□□ -2.38
SMC5-202ENST00000471372 FLNAP21333 2647 aaKnown RBP0.2□□□□□ -2.38
SMC5-202ENST00000471372 SCRIBQ14160 1630 aa0.2□□□□□ -2.38
SMC5-202ENST00000471372 NSD1Q96L73 2696 aaPredicted RBP0.2□□□□□ -2.38
SMC5-202ENST00000471372 ALMS1Q8TCU4 4167 aa0.19□□□□□ -2.38
SMC5-202ENST00000471372 IFI6P09912 130 aa0.19□□□□□ -2.38
SMC5-202ENST00000471372 STAB2Q8WWQ8 2551 aa0.18□□□□□ -2.38
SMC5-202ENST00000471372 PRKDCP78527 4128 aaKnown RBP0.18□□□□□ -2.38
SMC5-202ENST00000471372 KDM5DQ9BY66 1539 aa0.18□□□□□ -2.38
SMC5-202ENST00000471372 REV3LO60673 3130 aa0.17□□□□□ -2.38
SMC5-202ENST00000471372 CHD8Q9HCK8 2581 aa0.17□□□□□ -2.38
SMC5-202ENST00000471372 RGPD8O14715 1765 aaPredicted RBP0.17□□□□□ -2.38
SMC5-202ENST00000471372 RGPD5Q99666 1765 aa0.17□□□□□ -2.38
SMC5-202ENST00000471372 HSPG2P98160 4391 aa0.16□□□□□ -2.38
SMC5-202ENST00000471372 UMAD1C9J7I0 102 aa0.16□□□□□ -2.38
SMC5-202ENST00000471372 M0R2T5 61 aa0.16□□□□□ -2.38
SMC5-202ENST00000471372 NDUFA3O95167 84 aa0.16□□□□□ -2.38
SMC5-202ENST00000471372 ATP5EP2Q5VTU8 51 aa0.16□□□□□ -2.38
SMC5-202ENST00000471372 MAGI3Q5TCQ9 1506 aa0.16□□□□□ -2.38
SMC5-202ENST00000471372 SPRR2GQ9BYE4 73 aa0.15□□□□□ -2.39
SMC5-202ENST00000471372 TIAM2Q8IVF5 1701 aa0.15□□□□□ -2.39
SMC5-202ENST00000471372 ACANP16112 2415 aa0.15□□□□□ -2.39
SMC5-202ENST00000471372 EP300Q09472 2414 aaPredicted RBP0.15□□□□□ -2.39
SMC5-202ENST00000471372 ABCC1P33527 1531 aa0.13□□□□□ -2.39
SMC5-202ENST00000471372 SSPOA2VEC9 5147 aa0.13□□□□□ -2.39
SMC5-202ENST00000471372 KNL1Q8NG31 2342 aa0.13□□□□□ -2.39
SMC5-202ENST00000471372 FLNCQ14315 2725 aa0.13□□□□□ -2.39
SMC5-202ENST00000471372 A0A087WXM4 84 aa0.13□□□□□ -2.39
SMC5-202ENST00000471372 SMIM13P0DJ93 91 aa0.13□□□□□ -2.39
SMC5-202ENST00000471372 COX6B2Q6YFQ2 88 aa0.13□□□□□ -2.39
SMC5-202ENST00000471372 EPG5Q9HCE0 2579 aa0.13□□□□□ -2.39
SMC5-202ENST00000471372 NBASA2RRP1 2371 aa0.12□□□□□ -2.39
SMC5-202ENST00000471372 CNOT1A5YKK6 2376 aaKnown RBP0.12□□□□□ -2.39
SMC5-202ENST00000471372 ARFGEF2Q9Y6D5 1785 aa0.12□□□□□ -2.39
SMC5-202ENST00000471372 TNRC6CQ9HCJ0 1690 aaKnown RBP0.12□□□□□ -2.39
SMC5-202ENST00000471372 SPG11Q96JI7 2443 aa0.12□□□□□ -2.39
SMC5-202ENST00000471372 DCHS2Q6V1P9 2916 aa0.12□□□□□ -2.39
SMC5-202ENST00000471372 CEP290O15078 2479 aa0.11□□□□□ -2.39
SMC5-202ENST00000471372 NWD1Q149M9 1564 aa0.11□□□□□ -2.39
SMC5-202ENST00000471372 TENM2Q9NT68 2774 aa0.11□□□□□ -2.39
SMC5-202ENST00000471372 DOPEY1Q5JWR5 2465 aa0.11□□□□□ -2.39
SMC5-202ENST00000471372 RRBP1Q9P2E9 1410 aaKnown RBP0.11□□□□□ -2.39
SMC5-202ENST00000471372 CFAP74Q9C0B2 1584 aa0.11□□□□□ -2.39
SMC5-202ENST00000471372 SETD2Q9BYW2 2564 aaPredicted RBP0.1□□□□□ -2.39
SMC5-202ENST00000471372 STAB1Q9NY15 2570 aa0.1□□□□□ -2.39
SMC5-202ENST00000471372 IFI27P40305 119 aaPredicted RBP0.1□□□□□ -2.39
SMC5-202ENST00000471372 C18orf32Q8TCD1 76 aa0.1□□□□□ -2.39
SMC5-202ENST00000471372 FAM186AA6NE01 2351 aa0.1□□□□□ -2.39
SMC5-202ENST00000471372 SETXQ7Z333 2677 aaKnown RBP0.09□□□□□ -2.39
SMC5-202ENST00000471372 AKAP13Q12802 2813 aa0.09□□□□□ -2.4
SMC5-202ENST00000471372 ZANQ9Y493 2812 aa0.09□□□□□ -2.4
SMC5-202ENST00000471372 NF1P21359 2839 aa0.08□□□□□ -2.4
SMC5-202ENST00000471372 NREPQ16612 68 aa0.08□□□□□ -2.4
SMC5-202ENST00000471372 PCNX1Q96RV3 2341 aa0.08□□□□□ -2.4
SMC5-202ENST00000471372 NBEAL1Q6ZS30 2694 aa0.08□□□□□ -2.4
SMC5-202ENST00000471372 RIF1Q5UIP0 2472 aaKnown RBP0.07□□□□□ -2.4
SMC5-202ENST00000471372 ACACAQ13085 2346 aa0.07□□□□□ -2.4
SMC5-202ENST00000471372 LRRK2Q5S007 2527 aa0.07□□□□□ -2.4
SMC5-202ENST00000471372 ANKHD1Q8IWZ3 2542 aaKnown RBP0.07□□□□□ -2.4
SMC5-202ENST00000471372 SPTBN4Q9H254 2564 aa0.06□□□□□ -2.4
SMC5-202ENST00000471372 TGP01266 2768 aa0.06□□□□□ -2.4
SMC5-202ENST00000471372 LCE6AA0A183 80 aa0.06□□□□□ -2.4
SMC5-202ENST00000471372 MYO18BQ8IUG5 2567 aa0.06□□□□□ -2.4
SMC5-202ENST00000471372 MAP1AP78559 2803 aaPredicted RBP0.06□□□□□ -2.4
SMC5-202ENST00000471372 FLNBO75369 2602 aaKnown RBP0.06□□□□□ -2.4
SMC5-202ENST00000471372 PKD1L2Q7Z442 2459 aa0.06□□□□□ -2.4
SMC5-202ENST00000471372 NESP48681 1621 aa0.05□□□□□ -2.4
SMC5-202ENST00000471372 HECTD4Q9Y4D8 3996 aa0.05□□□□□ -2.4
SMC5-202ENST00000471372 USP9YO00507 2555 aaPredicted RBP0.05□□□□□ -2.4
SMC5-202ENST00000471372 CCDC168Q8NDH2 2452 aa0.05□□□□□ -2.4
SMC5-202ENST00000471372 PDE4DIPQ5VU43 2346 aa0.05□□□□□ -2.4
SMC5-202ENST00000471372 C4AP0C0L4 1744 aa0.04□□□□□ -2.4
SMC5-202ENST00000471372 C4BP0C0L5 1744 aa0.04□□□□□ -2.4
SMC5-202ENST00000471372 DEFB135Q30KP9 77 aa0.04□□□□□ -2.4
SMC5-202ENST00000471372 ITPR3Q14573 2671 aa0.04□□□□□ -2.4
SMC5-202ENST00000471372 SRRM2Q9UQ35 2752 aaKnown RBP0.03□□□□□ -2.41
SMC5-202ENST00000471372 FASNP49327 2511 aaKnown RBP0.03□□□□□ -2.41
SMC5-202ENST00000471372 NBPF19A0A087WUL8 3843 aa0.02□□□□□ -2.41
SMC5-202ENST00000471372 FAT1Q14517 4588 aa0.02□□□□□ -2.41
SMC5-202ENST00000471372 SONP18583 2426 aaKnown RBP0.02□□□□□ -2.41
SMC5-202ENST00000471372 HERC1Q15751 4861 aa0.02□□□□□ -2.41
SMC5-202ENST00000471372 CCDC88BA6NC98 1476 aa0.02□□□□□ -2.41
SMC5-202ENST00000471372 LRP2P98164 4655 aa0.02□□□□□ -2.41
SMC5-202ENST00000471372 USP9XQ93008 2570 aaPredicted RBP0.01□□□□□ -2.41
SMC5-202ENST00000471372 NDUFA4O00483 81 aa0.01□□□□□ -2.41
SMC5-202ENST00000471372 HMGA1P17096 107 aaKnown RBP0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms