RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 TRBV30A0A0K0K1B3 111 aa1.78□□□□□ -2.12
COL11A1-208ENST00000470170 LINC01549A6NIU2 74 aa1.78□□□□□ -2.12
COL11A1-208ENST00000470170 SPINK7P58062 85 aa1.78□□□□□ -2.12
COL11A1-208ENST00000470170 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.78□□□□□ -2.12
COL11A1-208ENST00000470170 WFDC9Q8NEX5 89 aa1.78□□□□□ -2.12
COL11A1-208ENST00000470170 SMIM11BQ8TCY0 68 aa1.78□□□□□ -2.12
COL11A1-208ENST00000470170 OBSCN-AS1Q96MR7 158 aa1.78□□□□□ -2.12
COL11A1-208ENST00000470170 MTORP42345 2549 aa1.78□□□□□ -2.12
COL11A1-208ENST00000470170 JMJD1CQ15652 2540 aa1.78□□□□□ -2.12
COL11A1-208ENST00000470170 LRRC37A2A6NM11 1700 aa1.77□□□□□ -2.13
COL11A1-208ENST00000470170 UBR5O95071 2799 aaPredicted RBP1.77□□□□□ -2.13
COL11A1-208ENST00000470170 NOTCH1P46531 2555 aa1.77□□□□□ -2.13
COL11A1-208ENST00000470170 NREPQ16612 68 aa1.77□□□□□ -2.13
COL11A1-208ENST00000470170 SPINK13Q1W4C9 94 aa1.77□□□□□ -2.13
COL11A1-208ENST00000470170 PLAC4Q8WY50 150 aa1.77□□□□□ -2.13
COL11A1-208ENST00000470170 MDC1Q14676 2089 aaKnown RBP1.77□□□□□ -2.13
COL11A1-208ENST00000470170 TLN1Q9Y490 2541 aaKnown RBP1.77□□□□□ -2.13
COL11A1-208ENST00000470170 C4AP0C0L4 1744 aa1.77□□□□□ -2.13
COL11A1-208ENST00000470170 E9PCH4 1651 aa1.77□□□□□ -2.13
COL11A1-208ENST00000470170 ASPMQ8IZT6 3477 aa1.76□□□□□ -2.13
COL11A1-208ENST00000470170 TRBV6-1A0A0K0K1D8 114 aa1.76□□□□□ -2.13
COL11A1-208ENST00000470170 NCR3O14931 201 aa1.76□□□□□ -2.13
COL11A1-208ENST00000470170 PIN1P1O15428 100 aa1.76□□□□□ -2.13
COL11A1-208ENST00000470170 PRB1P04280 392 aa1.76□□□□□ -2.13
COL11A1-208ENST00000470170 DEFB112Q30KQ8 113 aa1.76□□□□□ -2.13
COL11A1-208ENST00000470170 Q6ZRX8 168 aa1.76□□□□□ -2.13
COL11A1-208ENST00000470170 GAFA1Q96PS6 74 aa1.76□□□□□ -2.13
COL11A1-208ENST00000470170 RTTNQ86VV8 2226 aa1.75□□□□□ -2.13
COL11A1-208ENST00000470170 MYO7BQ6PIF6 2116 aa1.75□□□□□ -2.13
COL11A1-208ENST00000470170 TET1Q8NFU7 2136 aa1.75□□□□□ -2.13
COL11A1-208ENST00000470170 IFT172Q9UG01 1749 aa1.75□□□□□ -2.13
COL11A1-208ENST00000470170 C5P01031 1676 aa1.75□□□□□ -2.13
COL11A1-208ENST00000470170 A0A1B0GU69 56 aa1.75□□□□□ -2.13
COL11A1-208ENST00000470170 ABCA4P78363 2273 aa1.75□□□□□ -2.13
COL11A1-208ENST00000470170 FREM1Q5H8C1 2179 aa1.75□□□□□ -2.13
COL11A1-208ENST00000470170 HTTP42858 3142 aa1.75□□□□□ -2.13
COL11A1-208ENST00000470170 COL4A1P02462 1669 aa1.74□□□□□ -2.13
COL11A1-208ENST00000470170 PRRC2BQ5JSZ5 2229 aaKnown RBP1.74□□□□□ -2.13
COL11A1-208ENST00000470170 SORL1Q92673 2214 aa1.74□□□□□ -2.13
COL11A1-208ENST00000470170 CCDC168Q8NDH2 2452 aa1.74□□□□□ -2.13
COL11A1-208ENST00000470170 A0A096LNT2 108 aa1.74□□□□□ -2.13
COL11A1-208ENST00000470170 HAMPP81172 84 aa1.74□□□□□ -2.13
COL11A1-208ENST00000470170 LINC00575Q6W349 94 aa1.74□□□□□ -2.13
COL11A1-208ENST00000470170 UBL5Q9BZL1 73 aa1.74□□□□□ -2.13
COL11A1-208ENST00000470170 ATRQ13535 2644 aa1.74□□□□□ -2.13
COL11A1-208ENST00000470170 WDFY4Q6ZS81 3184 aa1.74□□□□□ -2.13
COL11A1-208ENST00000470170 XIRP2A4UGR9 3374 aa1.74□□□□□ -2.13
COL11A1-208ENST00000470170 C4BP0C0L5 1744 aa1.74□□□□□ -2.13
COL11A1-208ENST00000470170 ANKRD36A6QL64 1941 aa1.74□□□□□ -2.13
COL11A1-208ENST00000470170 ZNF236Q9UL36 1845 aa1.73□□□□□ -2.13
COL11A1-208ENST00000470170 LY75O60449 1722 aa1.73□□□□□ -2.13
COL11A1-208ENST00000470170 NBEAL1Q6ZS30 2694 aa1.73□□□□□ -2.13
COL11A1-208ENST00000470170 DNAH14Q0VDD8 3507 aa1.73□□□□□ -2.13
COL11A1-208ENST00000470170 A0A1B0GUL6 1792 aa1.72□□□□□ -2.13
COL11A1-208ENST00000470170 DOCK10Q96BY6 2186 aa1.72□□□□□ -2.13
COL11A1-208ENST00000470170 CDC42BPAQ5VT25 1732 aa1.72□□□□□ -2.13
COL11A1-208ENST00000470170 GVQW2A0A096LPI5 108 aaPredicted RBP1.72□□□□□ -2.13
COL11A1-208ENST00000470170 LCE6AA0A183 80 aa1.72□□□□□ -2.13
COL11A1-208ENST00000470170 STAB1Q9NY15 2570 aa1.72□□□□□ -2.13
COL11A1-208ENST00000470170 IGSF10Q6WRI0 2623 aa1.71□□□□□ -2.13
COL11A1-208ENST00000470170 SPEGQ15772 3267 aa1.71□□□□□ -2.14
COL11A1-208ENST00000470170 GCC2Q8IWJ2 1684 aa1.71□□□□□ -2.14
COL11A1-208ENST00000470170 FLNCQ14315 2725 aa1.71□□□□□ -2.14
COL11A1-208ENST00000470170 PTPRQQ9UMZ3 2332 aa1.71□□□□□ -2.14
COL11A1-208ENST00000470170 FCER1GP30273 86 aa1.71□□□□□ -2.14
COL11A1-208ENST00000470170 RPL38P63173 70 aaKnown RBP1.71□□□□□ -2.14
COL11A1-208ENST00000470170 ENHOQ6UWT2 76 aa1.71□□□□□ -2.14
COL11A1-208ENST00000470170 CDH23Q9H251 3354 aa1.71□□□□□ -2.14
COL11A1-208ENST00000470170 A0A0G2JMZ2 1700 aa1.71□□□□□ -2.14
COL11A1-208ENST00000470170 WDR87Q6ZQQ6 2873 aa1.71□□□□□ -2.14
COL11A1-208ENST00000470170 UBR3Q6ZT12 1888 aa1.71□□□□□ -2.14
COL11A1-208ENST00000470170 TECTAO75443 2155 aa1.71□□□□□ -2.14
COL11A1-208ENST00000470170 IGF2RP11717 2491 aa1.7□□□□□ -2.14
COL11A1-208ENST00000470170 DEFB103AP81534 67 aa1.7□□□□□ -2.14
COL11A1-208ENST00000470170 TOMM5Q8N4H5 51 aa1.7□□□□□ -2.14
COL11A1-208ENST00000470170 CEP295Q9C0D2 2601 aa1.7□□□□□ -2.14
COL11A1-208ENST00000470170 TENM1Q9UKZ4 2725 aa1.7□□□□□ -2.14
COL11A1-208ENST00000470170 TSC2P49815 1807 aa1.69□□□□□ -2.14
COL11A1-208ENST00000470170 G3V318 75 aa1.69□□□□□ -2.14
COL11A1-208ENST00000470170 PRH1P02810 166 aa1.69□□□□□ -2.14
COL11A1-208ENST00000470170 COX7BP24311 80 aa1.69□□□□□ -2.14
COL11A1-208ENST00000470170 SERF2P84101 59 aa1.69□□□□□ -2.14
COL11A1-208ENST00000470170 SSBP3-AS1Q7Z2R9 100 aa1.69□□□□□ -2.14
COL11A1-208ENST00000470170 BCORQ6W2J9 1755 aa1.69□□□□□ -2.14
COL11A1-208ENST00000470170 ITPR1Q14643 2758 aa1.69□□□□□ -2.14
COL11A1-208ENST00000470170 TENM4Q6N022 2769 aa1.68□□□□□ -2.14
COL11A1-208ENST00000470170 F8P00451 2351 aa1.68□□□□□ -2.14
COL11A1-208ENST00000470170 LINC00959A0A1B0GUT2 108 aa1.68□□□□□ -2.14
COL11A1-208ENST00000470170 NMES1Q9C002 83 aa1.68□□□□□ -2.14
COL11A1-208ENST00000470170 DNAJC13O75165 2243 aa1.68□□□□□ -2.14
COL11A1-208ENST00000470170 ASXL3Q9C0F0 2248 aa1.68□□□□□ -2.14
COL11A1-208ENST00000470170 DOPEY2Q9Y3R5 2298 aa1.68□□□□□ -2.14
COL11A1-208ENST00000470170 FRYQ5TBA9 3013 aa1.67□□□□□ -2.14
COL11A1-208ENST00000470170 TOGARAM1Q9Y4F4 1720 aa1.67□□□□□ -2.14
COL11A1-208ENST00000470170 NDUFA4O00483 81 aa1.67□□□□□ -2.14
COL11A1-208ENST00000470170 RPL37P61927 97 aaKnown RBP1.67□□□□□ -2.14
COL11A1-208ENST00000470170 NCBP2-AS2Q69YL0 99 aa1.67□□□□□ -2.14
COL11A1-208ENST00000470170 HMCN1Q96RW7 5635 aa1.67□□□□□ -2.14
COL11A1-208ENST00000470170 SDK1Q7Z5N4 2213 aa1.67□□□□□ -2.14
COL11A1-208ENST00000470170 ZFHX3Q15911 3703 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms