RNA–Protein interactions for RNA: ENST00000469930.1

BRAF-202, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene BRAF, Length 1,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-202ENST00000469930 HERC2O95714 4834 aa12.81□□□□□ -0.36
BRAF-202ENST00000469930 FAM229AH3BQW9 127 aa12.81□□□□□ -0.36
BRAF-202ENST00000469930 RPL13AP40429 203 aaKnown RBP12.81□□□□□ -0.36
BRAF-202ENST00000469930 TRBV7-6A0A0J9YX20 115 aa12.8□□□□□ -0.36
BRAF-202ENST00000469930 ZNF73O43830 326 aaPredicted RBP12.8□□□□□ -0.36
BRAF-202ENST00000469930 RPL28P46779 137 aaKnown RBP12.8□□□□□ -0.36
BRAF-202ENST00000469930 RPL37AP61513 92 aaKnown RBP12.8□□□□□ -0.36
BRAF-202ENST00000469930 Q8N1X5 172 aa12.8□□□□□ -0.36
BRAF-202ENST00000469930 PCLOQ9Y6V0 5065 aa12.79□□□□□ -0.36
BRAF-202ENST00000469930 H0Y9J4 135 aa12.79□□□□□ -0.36
BRAF-202ENST00000469930 KRTAP10-4P60372 401 aaPredicted RBP12.79□□□□□ -0.36
BRAF-202ENST00000469930 SMIM11BQ8TCY0 68 aa12.79□□□□□ -0.36
BRAF-202ENST00000469930 FAT1Q14517 4588 aa12.78□□□□□ -0.36
BRAF-202ENST00000469930 PLA2G1BP04054 148 aaKnown RBP12.78□□□□□ -0.36
BRAF-202ENST00000469930 C1orf137Q5JT78 98 aa12.78□□□□□ -0.36
BRAF-202ENST00000469930 DIRC1Q969H9 104 aa12.77□□□□□ -0.37
BRAF-202ENST00000469930 VPS13BQ7Z7G8 4022 aa12.77□□□□□ -0.37
BRAF-202ENST00000469930 IGLV7-43P04211 117 aa12.76□□□□□ -0.37
BRAF-202ENST00000469930 KRTAP13-1Q8IUC0 172 aa12.76□□□□□ -0.37
BRAF-202ENST00000469930 C6orf99Q4VX62 202 aa12.75□□□□□ -0.37
BRAF-202ENST00000469930 ETDCA0A1B0GVM5 59 aa12.74□□□□□ -0.37
BRAF-202ENST00000469930 B5MCH6 92 aa12.74□□□□□ -0.37
BRAF-202ENST00000469930 K7ERJ3 54 aa12.74□□□□□ -0.37
BRAF-202ENST00000469930 PCP4L1A6NKN8 68 aa12.73□□□□□ -0.37
BRAF-202ENST00000469930 Q5VSD8 79 aa12.73□□□□□ -0.37
BRAF-202ENST00000469930 ZNF861PO60384 105 aa12.72□□□□□ -0.37
BRAF-202ENST00000469930 ELOF1P60002 83 aaKnown RBP12.72□□□□□ -0.37
BRAF-202ENST00000469930 FAM19A1Q7Z5A9 133 aa12.72□□□□□ -0.37
BRAF-202ENST00000469930 SNHG12Q9BXW3 62 aa12.72□□□□□ -0.37
BRAF-202ENST00000469930 Q6ZRX8 168 aa12.71□□□□□ -0.37
BRAF-202ENST00000469930 VAMP3Q15836 100 aa12.7□□□□□ -0.38
BRAF-202ENST00000469930 H7C2G1 150 aa12.69□□□□□ -0.38
BRAF-202ENST00000469930 TSPAN13O95857 204 aa12.69□□□□□ -0.38
BRAF-202ENST00000469930 INAFM2P0DMQ5 153 aa12.69□□□□□ -0.38
BRAF-202ENST00000469930 COX7BP24311 80 aa12.69□□□□□ -0.38
BRAF-202ENST00000469930 UBE2AP49459 152 aa12.69□□□□□ -0.38
BRAF-202ENST00000469930 BATFQ16520 125 aa12.69□□□□□ -0.38
BRAF-202ENST00000469930 Q1RN00 199 aa12.68□□□□□ -0.38
BRAF-202ENST00000469930 H0YGX0 51 aa12.67□□□□□ -0.38
BRAF-202ENST00000469930 PRLHP81277 87 aa12.66□□□□□ -0.38
BRAF-202ENST00000469930 SPINK6Q6UWN8 80 aa12.66□□□□□ -0.38
BRAF-202ENST00000469930 Q9BRP9 147 aa12.64□□□□□ -0.39
BRAF-202ENST00000469930 DHRS4-AS1Q9P1J3 65 aa12.64□□□□□ -0.39
BRAF-202ENST00000469930 TRIAP1O43715 76 aa12.63□□□□□ -0.39
BRAF-202ENST00000469930 SMCR5Q8TEV8 140 aa12.63□□□□□ -0.39
BRAF-202ENST00000469930 COX6CP09669 75 aa12.62□□□□□ -0.39
BRAF-202ENST00000469930 COL5A1-AS1Q5SY13 56 aa12.62□□□□□ -0.39
BRAF-202ENST00000469930 LINC00575Q6W349 94 aa12.61□□□□□ -0.39
BRAF-202ENST00000469930 TAX1BP3O14907 124 aa12.6□□□□□ -0.39
BRAF-202ENST00000469930 PSMB2P49721 201 aa12.6□□□□□ -0.39
BRAF-202ENST00000469930 A0A1B0GX51 115 aa12.59□□□□□ -0.39
BRAF-202ENST00000469930 C9orf118A6NHY6 69 aa12.59□□□□□ -0.39
BRAF-202ENST00000469930 PKHD1L1Q86WI1 4243 aa12.59□□□□□ -0.39
BRAF-202ENST00000469930 HIGD2AQ9BW72 106 aa12.58□□□□□ -0.4
BRAF-202ENST00000469930 SLC25A20O43772 301 aa12.57□□□□□ -0.4
BRAF-202ENST00000469930 SNCGO76070 127 aa12.55□□□□□ -0.4
BRAF-202ENST00000469930 hADV29S1A0JD25 119 aa12.54□□□□□ -0.4
BRAF-202ENST00000469930 ERC2-IT1O76042 136 aa12.54□□□□□ -0.4
BRAF-202ENST00000469930 SRRM2Q9UQ35 2752 aaKnown RBP12.54□□□□□ -0.4
BRAF-202ENST00000469930 LYRM7Q5U5X0 104 aa12.53□□□□□ -0.4
BRAF-202ENST00000469930 ZNF706Q9Y5V0 76 aaPredicted RBP12.53□□□□□ -0.4
BRAF-202ENST00000469930 SCGB1C2P0DMR2 95 aa12.52□□□□□ -0.41
BRAF-202ENST00000469930 FAM218AQ96MZ4 157 aa12.52□□□□□ -0.41
BRAF-202ENST00000469930 H3BUT2 72 aa12.51□□□□□ -0.41
BRAF-202ENST00000469930 KRTAP4-5Q9BYR2 181 aa12.51□□□□□ -0.41
BRAF-202ENST00000469930 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.5□□□□□ -0.41
BRAF-202ENST00000469930 SPRR4Q96PI1 79 aa12.5□□□□□ -0.41
BRAF-202ENST00000469930 IGLV5-48A0A075B6I7 105 aa12.48□□□□□ -0.41
BRAF-202ENST00000469930 A0A1W2PPM0 123 aa12.48□□□□□ -0.41
BRAF-202ENST00000469930 LST1O00453 97 aa12.48□□□□□ -0.41
BRAF-202ENST00000469930 TRACP01848 142 aa12.48□□□□□ -0.41
BRAF-202ENST00000469930 CLEC2BQ92478 149 aa12.48□□□□□ -0.41
BRAF-202ENST00000469930 NAA38Q9BRA0 125 aaKnown RBP12.48□□□□□ -0.41
BRAF-202ENST00000469930 TRBV20-1A0A075B6N2 111 aa12.47□□□□□ -0.41
BRAF-202ENST00000469930 KRTAP1-4P0C5Y4 121 aa12.47□□□□□ -0.41
BRAF-202ENST00000469930 SPRR1BP22528 89 aa12.47□□□□□ -0.41
BRAF-202ENST00000469930 LINC00483Q53H64 154 aa12.47□□□□□ -0.41
BRAF-202ENST00000469930 OCIAD2Q56VL3 154 aa12.46□□□□□ -0.41
BRAF-202ENST00000469930 FABP2P12104 132 aa12.44□□□□□ -0.42
BRAF-202ENST00000469930 LINC01547P58512 204 aaPredicted RBP12.44□□□□□ -0.42
BRAF-202ENST00000469930 FAM229BQ4G0N7 80 aa12.44□□□□□ -0.42
BRAF-202ENST00000469930 Q6ZQY7 126 aa12.44□□□□□ -0.42
BRAF-202ENST00000469930 ST20-AS1Q8NBB2 130 aa12.44□□□□□ -0.42
BRAF-202ENST00000469930 PPDPFLQ8WWR9 84 aa12.44□□□□□ -0.42
BRAF-202ENST00000469930 TCL1BO95988 128 aa12.43□□□□□ -0.42
BRAF-202ENST00000469930 GHRHP01286 108 aa12.43□□□□□ -0.42
BRAF-202ENST00000469930 ATXN8Q156A1 80 aa12.43□□□□□ -0.42
BRAF-202ENST00000469930 TEX49A0A1B0GTD5 131 aa12.42□□□□□ -0.42
BRAF-202ENST00000469930 H3BQ85 93 aa12.42□□□□□ -0.42
BRAF-202ENST00000469930 GAGE2AQ6NT46 116 aa12.4□□□□□ -0.42
BRAF-202ENST00000469930 DNAL4O96015 105 aa12.39□□□□□ -0.43
BRAF-202ENST00000469930 Q8N377 158 aa12.39□□□□□ -0.43
BRAF-202ENST00000469930 LINC01600Q96MT4 127 aa12.38□□□□□ -0.43
BRAF-202ENST00000469930 OXTP01178 125 aa12.35□□□□□ -0.43
BRAF-202ENST00000469930 ORMDL1Q9P0S3 153 aa12.35□□□□□ -0.43
BRAF-202ENST00000469930 CRYGAP11844 174 aa12.34□□□□□ -0.43
BRAF-202ENST00000469930 SMIM29Q86T20 159 aa12.34□□□□□ -0.43
BRAF-202ENST00000469930 DEFB105AQ8NG35 78 aa12.34□□□□□ -0.43
BRAF-202ENST00000469930 SPCS1Q9Y6A9 102 aa12.34□□□□□ -0.43
BRAF-202ENST00000469930 ABCA13Q86UQ4 5058 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms