RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 ACYP2P14621 99 aa10.52□□□□□ -0.72
BRAT1-204ENST00000469750 A8MUN3 132 aa10.52□□□□□ -0.73
BRAT1-204ENST00000469750 ATP11AUNQ6ZP68 121 aa10.52□□□□□ -0.73
BRAT1-204ENST00000469750 TRBV7-4A0A0J9YYF1 115 aa10.51□□□□□ -0.73
BRAT1-204ENST00000469750 KTN1-AS1Q86SY8 53 aa10.51□□□□□ -0.73
BRAT1-204ENST00000469750 TRAV22A0A0B4J277 110 aa10.5□□□□□ -0.73
BRAT1-204ENST00000469750 IGLV1-50A0A075B6I6 118 aa10.5□□□□□ -0.73
BRAT1-204ENST00000469750 PRR34Q9NV39 138 aa10.5□□□□□ -0.73
BRAT1-204ENST00000469750 GIG44P09565 113 aaPredicted RBP10.49□□□□□ -0.73
BRAT1-204ENST00000469750 HECTD1Q9ULT8 2610 aa10.49□□□□□ -0.73
BRAT1-204ENST00000469750 RPL37AP61513 92 aaKnown RBP10.49□□□□□ -0.73
BRAT1-204ENST00000469750 KCNQ1DNQ9H478 68 aa10.48□□□□□ -0.73
BRAT1-204ENST00000469750 KRTAP10-3P60369 221 aa10.48□□□□□ -0.73
BRAT1-204ENST00000469750 KLKP1Q107X0 134 aa10.46□□□□□ -0.73
BRAT1-204ENST00000469750 SPINT4Q6UDR6 99 aa10.46□□□□□ -0.74
BRAT1-204ENST00000469750 LCA10Q71F78 164 aa10.46□□□□□ -0.74
BRAT1-204ENST00000469750 LINC00612Q8N6U2 182 aa10.46□□□□□ -0.74
BRAT1-204ENST00000469750 LINC00528Q8N1L1 170 aa10.44□□□□□ -0.74
BRAT1-204ENST00000469750 C15orf56Q8N910 161 aa10.44□□□□□ -0.74
BRAT1-204ENST00000469750 PLA2G1BP04054 148 aaKnown RBP10.44□□□□□ -0.74
BRAT1-204ENST00000469750 BPTFQ12830 3046 aa10.43□□□□□ -0.74
BRAT1-204ENST00000469750 UNC80Q8N2C7 3258 aa10.43□□□□□ -0.74
BRAT1-204ENST00000469750 A8MWP4 228 aa10.43□□□□□ -0.74
BRAT1-204ENST00000469750 USP24Q9UPU5 2620 aa10.42□□□□□ -0.74
BRAT1-204ENST00000469750 Q96NJ1 140 aa10.42□□□□□ -0.74
BRAT1-204ENST00000469750 MGAM2Q2M2H8 2515 aa10.41□□□□□ -0.74
BRAT1-204ENST00000469750 EIF4EBP3O60516 100 aaPredicted RBP10.41□□□□□ -0.74
BRAT1-204ENST00000469750 H7BZZ5 65 aa10.38□□□□□ -0.75
BRAT1-204ENST00000469750 LOC101927531A0A1B0GV80 90 aa10.38□□□□□ -0.75
BRAT1-204ENST00000469750 K7EQZ3 153 aa10.38□□□□□ -0.75
BRAT1-204ENST00000469750 KRTAP1-3Q8IUG1 177 aa10.38□□□□□ -0.75
BRAT1-204ENST00000469750 MRPL34Q9BQ48 92 aaKnown RBP10.37□□□□□ -0.75
BRAT1-204ENST00000469750 ZNF292O60281 2723 aa10.37□□□□□ -0.75
BRAT1-204ENST00000469750 CDH23Q9H251 3354 aa10.37□□□□□ -0.75
BRAT1-204ENST00000469750 COA5Q86WW8 74 aa10.37□□□□□ -0.75
BRAT1-204ENST00000469750 C9orf129Q5T035 196 aaKnown RBP10.36□□□□□ -0.75
BRAT1-204ENST00000469750 PRR15Q8IV56 129 aa10.36□□□□□ -0.75
BRAT1-204ENST00000469750 A0A087WTM6 91 aa10.35□□□□□ -0.75
BRAT1-204ENST00000469750 IGFL1Q6UW32 110 aa10.35□□□□□ -0.75
BRAT1-204ENST00000469750 TLX1NBP0CAT3 122 aa10.34□□□□□ -0.75
BRAT1-204ENST00000469750 C9orf163Q8N9P6 203 aa10.34□□□□□ -0.75
BRAT1-204ENST00000469750 ZNF861PO60384 105 aa10.34□□□□□ -0.75
BRAT1-204ENST00000469750 PLA2G2DQ9UNK4 145 aa10.32□□□□□ -0.76
BRAT1-204ENST00000469750 TRIOO75962 3097 aa10.32□□□□□ -0.76
BRAT1-204ENST00000469750 KRTAP1-1Q07627 177 aa10.32□□□□□ -0.76
BRAT1-204ENST00000469750 SSBP3-AS1Q7Z2R9 100 aa10.32□□□□□ -0.76
BRAT1-204ENST00000469750 Q8N377 158 aa10.31□□□□□ -0.76
BRAT1-204ENST00000469750 J3QL48 77 aa10.3□□□□□ -0.76
BRAT1-204ENST00000469750 UQCR11O14957 56 aa10.29□□□□□ -0.76
BRAT1-204ENST00000469750 LINC00304Q8N9R0 145 aa10.28□□□□□ -0.76
BRAT1-204ENST00000469750 C8orf17Q9NRJ1 99 aa10.27□□□□□ -0.77
BRAT1-204ENST00000469750 APLNQ9ULZ1 77 aa10.26□□□□□ -0.77
BRAT1-204ENST00000469750 DSCR10P59022 87 aa10.25□□□□□ -0.77
BRAT1-204ENST00000469750 XIRP2A4UGR9 3374 aa10.24□□□□□ -0.77
BRAT1-204ENST00000469750 IGLV8-61A0A075B6I0 122 aa10.24□□□□□ -0.77
BRAT1-204ENST00000469750 LINC01600Q96MT4 127 aa10.24□□□□□ -0.77
BRAT1-204ENST00000469750 A0A1B0GVX0 72 aa10.23□□□□□ -0.77
BRAT1-204ENST00000469750 CASC10Q5T4H9 136 aa10.23□□□□□ -0.77
BRAT1-204ENST00000469750 CNBPP62633 177 aaKnown RBP10.23□□□□□ -0.77
BRAT1-204ENST00000469750 A0A1W2PNN7 141 aa10.22□□□□□ -0.77
BRAT1-204ENST00000469750 MIR22HGQ0VDD5 57 aa10.22□□□□□ -0.77
BRAT1-204ENST00000469750 FLNAP21333 2647 aaKnown RBP10.21□□□□□ -0.77
BRAT1-204ENST00000469750 IGLV7-43P04211 117 aa10.21□□□□□ -0.78
BRAT1-204ENST00000469750 MGAQ8IWI9 3026 aa10.21□□□□□ -0.78
BRAT1-204ENST00000469750 ZNF575Q86XF7 245 aa10.2□□□□□ -0.78
BRAT1-204ENST00000469750 SZT2Q5T011 3432 aa10.2□□□□□ -0.78
BRAT1-204ENST00000469750 A0A0G2JQZ4 141 aa10.2□□□□□ -0.78
BRAT1-204ENST00000469750 WDFY4Q6ZS81 3184 aa10.2□□□□□ -0.78
BRAT1-204ENST00000469750 CENPEQ02224 2701 aa10.2□□□□□ -0.78
BRAT1-204ENST00000469750 CDC42SE1Q9NRR8 79 aa10.2□□□□□ -0.78
BRAT1-204ENST00000469750 SMR3BP02814 79 aaPredicted RBP10.2□□□□□ -0.78
BRAT1-204ENST00000469750 PSORS1C2Q9UIG4 136 aa10.19□□□□□ -0.78
BRAT1-204ENST00000469750 OBSCN-AS1Q96MR7 158 aa10.18□□□□□ -0.78
BRAT1-204ENST00000469750 ANAPC11Q9NYG5 84 aa10.18□□□□□ -0.78
BRAT1-204ENST00000469750 HELZ2Q9BYK8 2649 aaKnown RBP10.17□□□□□ -0.78
BRAT1-204ENST00000469750 MAST4O15021 2626 aa10.17□□□□□ -0.78
BRAT1-204ENST00000469750 SPRR4Q96PI1 79 aa10.16□□□□□ -0.78
BRAT1-204ENST00000469750 ATRQ13535 2644 aa10.16□□□□□ -0.78
BRAT1-204ENST00000469750 RBM12B-AS1Q9P1G2 102 aa10.16□□□□□ -0.78
BRAT1-204ENST00000469750 ITPR3Q14573 2671 aa10.15□□□□□ -0.79
BRAT1-204ENST00000469750 C9orf92A6NGG3 77 aa10.14□□□□□ -0.79
BRAT1-204ENST00000469750 Q1T7F1 81 aa10.14□□□□□ -0.79
BRAT1-204ENST00000469750 COX6B2Q6YFQ2 88 aa10.13□□□□□ -0.79
BRAT1-204ENST00000469750 H3BS24 57 aa10.12□□□□□ -0.79
BRAT1-204ENST00000469750 CFAP46Q8IYW2 2715 aa10.11□□□□□ -0.79
BRAT1-204ENST00000469750 IGLV5-37A0A075B6J1 123 aa10.11□□□□□ -0.79
BRAT1-204ENST00000469750 A0A1W2PNM2 257 aa10.11□□□□□ -0.79
BRAT1-204ENST00000469750 Q5XG85 94 aa10.09□□□□□ -0.79
BRAT1-204ENST00000469750 SPANXA2-OT1Q8N9U9 137 aa10.09□□□□□ -0.79
BRAT1-204ENST00000469750 CRIPTQ9P021 101 aa10.09□□□□□ -0.79
BRAT1-204ENST00000469750 DSPP15924 2871 aaKnown RBP10.07□□□□□ -0.8
BRAT1-204ENST00000469750 AKAP13Q12802 2813 aa10.07□□□□□ -0.8
BRAT1-204ENST00000469750 IGLV5-48A0A075B6I7 105 aa10.04□□□□□ -0.8
BRAT1-204ENST00000469750 CFAP54Q96N23 3096 aa10.03□□□□□ -0.8
BRAT1-204ENST00000469750 TNP2Q05952 138 aa10□□□□□ -0.81
BRAT1-204ENST00000469750 COL6A3P12111 3177 aa10□□□□□ -0.81
BRAT1-204ENST00000469750 LINC01554Q52M75 96 aa9.99□□□□□ -0.81
BRAT1-204ENST00000469750 VPS13AQ96RL7 3174 aa9.99□□□□□ -0.81
BRAT1-204ENST00000469750 TNRC18O15417 2968 aaPredicted RBP9.99□□□□□ -0.81
BRAT1-204ENST00000469750 FAM104AQ969W3 186 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms