RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 KALRNO60229 2985 aa2.09□□□□□ -2.07
SCFD1-205ENST00000469043 ITPR1Q14643 2758 aa2.09□□□□□ -2.07
SCFD1-205ENST00000469043 ARHGAP5-AS1Q96IT6 56 aa2.09□□□□□ -2.07
SCFD1-205ENST00000469043 CDC42SE2Q9NRR3 84 aa2.09□□□□□ -2.07
SCFD1-205ENST00000469043 V9GYV3 84 aa2.09□□□□□ -2.07
SCFD1-205ENST00000469043 FLNCQ14315 2725 aa2.09□□□□□ -2.08
SCFD1-205ENST00000469043 USP9YO00507 2555 aaPredicted RBP2.08□□□□□ -2.08
SCFD1-205ENST00000469043 SNRPGP15A8MWD9 76 aa2.08□□□□□ -2.08
SCFD1-205ENST00000469043 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
SCFD1-205ENST00000469043 TMEM170BQ5T4T1 132 aa2.08□□□□□ -2.08
SCFD1-205ENST00000469043 UNQ6190/PRO20217Q6UXQ8 127 aa2.08□□□□□ -2.08
SCFD1-205ENST00000469043 SPCS1Q9Y6A9 102 aa2.08□□□□□ -2.08
SCFD1-205ENST00000469043 NBEAQ8NFP9 2946 aa2.08□□□□□ -2.08
SCFD1-205ENST00000469043 FASNP49327 2511 aaKnown RBP2.08□□□□□ -2.08
SCFD1-205ENST00000469043 HELZ2Q9BYK8 2649 aaKnown RBP2.07□□□□□ -2.08
SCFD1-205ENST00000469043 RELNP78509 3460 aa2.07□□□□□ -2.08
SCFD1-205ENST00000469043 CHD6Q8TD26 2715 aa2.07□□□□□ -2.08
SCFD1-205ENST00000469043 NAV3Q8IVL0 2385 aa2.07□□□□□ -2.08
SCFD1-205ENST00000469043 SMG1Q96Q15 3661 aaKnown RBP2.07□□□□□ -2.08
SCFD1-205ENST00000469043 TFF3Q07654 80 aa2.07□□□□□ -2.08
SCFD1-205ENST00000469043 ADIRFQ15847 76 aa2.07□□□□□ -2.08
SCFD1-205ENST00000469043 PIGYQ3MUY2 71 aa2.07□□□□□ -2.08
SCFD1-205ENST00000469043 C6orf201Q7Z4U5 140 aa2.07□□□□□ -2.08
SCFD1-205ENST00000469043 HIGD1BQ9P298 99 aa2.07□□□□□ -2.08
SCFD1-205ENST00000469043 KMT2BQ9UMN6 2715 aaPredicted RBP2.07□□□□□ -2.08
SCFD1-205ENST00000469043 ABCA2Q9BZC7 2435 aa2.07□□□□□ -2.08
SCFD1-205ENST00000469043 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.06□□□□□ -2.08
SCFD1-205ENST00000469043 A0A087WTM6 91 aa2.06□□□□□ -2.08
SCFD1-205ENST00000469043 DEFB108AA8MXU0 73 aa2.06□□□□□ -2.08
SCFD1-205ENST00000469043 CCL18P55774 89 aa2.06□□□□□ -2.08
SCFD1-205ENST00000469043 KLKP1Q107X0 134 aa2.06□□□□□ -2.08
SCFD1-205ENST00000469043 HMGN3Q15651 99 aa2.06□□□□□ -2.08
SCFD1-205ENST00000469043 PMCHL1Q16048 86 aa2.06□□□□□ -2.08
SCFD1-205ENST00000469043 ETDBQ3ZM63 59 aa2.06□□□□□ -2.08
SCFD1-205ENST00000469043 Q6ZQY7 126 aa2.06□□□□□ -2.08
SCFD1-205ENST00000469043 Q86TA4 180 aa2.06□□□□□ -2.08
SCFD1-205ENST00000469043 ST20Q9HBF5 79 aa2.06□□□□□ -2.08
SCFD1-205ENST00000469043 KAAG1Q9UBP8 84 aa2.06□□□□□ -2.08
SCFD1-205ENST00000469043 ABCA12Q86UK0 2595 aa2.06□□□□□ -2.08
SCFD1-205ENST00000469043 CENPEQ02224 2701 aa2.06□□□□□ -2.08
SCFD1-205ENST00000469043 HRNRQ86YZ3 2850 aaPredicted RBP2.06□□□□□ -2.08
SCFD1-205ENST00000469043 NAV2Q8IVL1 2488 aa2.06□□□□□ -2.08
SCFD1-205ENST00000469043 TLN2Q9Y4G6 2542 aa2.06□□□□□ -2.08
SCFD1-205ENST00000469043 COL12A1Q99715 3063 aa2.05□□□□□ -2.08
SCFD1-205ENST00000469043 TRBV25-1A0A075B6N4 114 aa2.05□□□□□ -2.08
SCFD1-205ENST00000469043 A0A1W2PPM0 123 aa2.05□□□□□ -2.08
SCFD1-205ENST00000469043 FAM223AQ8IWN6 122 aa2.05□□□□□ -2.08
SCFD1-205ENST00000469043 NMES1Q9C002 83 aa2.05□□□□□ -2.08
SCFD1-205ENST00000469043 UBR5O95071 2799 aaPredicted RBP2.05□□□□□ -2.08
SCFD1-205ENST00000469043 CCDC168Q8NDH2 2452 aa2.05□□□□□ -2.08
SCFD1-205ENST00000469043 UNC79Q9P2D8 2635 aa2.04□□□□□ -2.08
SCFD1-205ENST00000469043 LRBAP50851 2863 aa2.04□□□□□ -2.08
SCFD1-205ENST00000469043 MYO9AB2RTY4 2548 aa2.04□□□□□ -2.08
SCFD1-205ENST00000469043 PCOTHQ58A44 107 aa2.04□□□□□ -2.08
SCFD1-205ENST00000469043 GAFA1Q96PS6 74 aa2.04□□□□□ -2.08
SCFD1-205ENST00000469043 CCL19Q99731 98 aa2.04□□□□□ -2.08
SCFD1-205ENST00000469043 FXYD6Q9H0Q3 95 aa2.04□□□□□ -2.08
SCFD1-205ENST00000469043 ARL2-SNX15V9GYD0 113 aa2.04□□□□□ -2.08
SCFD1-205ENST00000469043 POLQO75417 2590 aa2.04□□□□□ -2.08
SCFD1-205ENST00000469043 DCHS2Q6V1P9 2916 aa2.03□□□□□ -2.08
SCFD1-205ENST00000469043 BCE1O60756 84 aa2.03□□□□□ -2.08
SCFD1-205ENST00000469043 EFNA4P52798 201 aa2.03□□□□□ -2.08
SCFD1-205ENST00000469043 NMSQ5H8A3 153 aa2.03□□□□□ -2.08
SCFD1-205ENST00000469043 HEPN1Q6WQI6 88 aa2.03□□□□□ -2.08
SCFD1-205ENST00000469043 CRYBG3Q68DQ2 2970 aa2.03□□□□□ -2.08
SCFD1-205ENST00000469043 UTP20O75691 2785 aaKnown RBP2.02□□□□□ -2.09
SCFD1-205ENST00000469043 F8VRH5 84 aa2.02□□□□□ -2.09
SCFD1-205ENST00000469043 M0R1W7 72 aa2.02□□□□□ -2.09
SCFD1-205ENST00000469043 COX6B1P14854 86 aa2.02□□□□□ -2.09
SCFD1-205ENST00000469043 ZNF137PP52743 207 aa2.02□□□□□ -2.09
SCFD1-205ENST00000469043 WFDC2Q14508 124 aa2.02□□□□□ -2.09
SCFD1-205ENST00000469043 PSMG4Q5JS54 123 aa2.02□□□□□ -2.09
SCFD1-205ENST00000469043 DEFB108BQ8NET1 73 aa2.02□□□□□ -2.09
SCFD1-205ENST00000469043 AMELXQ99217 191 aa2.02□□□□□ -2.09
SCFD1-205ENST00000469043 TMEM14BQ9NUH8 114 aa2.02□□□□□ -2.09
SCFD1-205ENST00000469043 SONP18583 2426 aaKnown RBP2.02□□□□□ -2.09
SCFD1-205ENST00000469043 ITPR2Q14571 2701 aa2.02□□□□□ -2.09
SCFD1-205ENST00000469043 FLNAP21333 2647 aaKnown RBP2.02□□□□□ -2.09
SCFD1-205ENST00000469043 ACANP16112 2415 aa2.01□□□□□ -2.09
SCFD1-205ENST00000469043 ITPR3Q14573 2671 aa2.01□□□□□ -2.09
SCFD1-205ENST00000469043 FXYD6-FXYD2A0A087WZ82 144 aa2.01□□□□□ -2.09
SCFD1-205ENST00000469043 KANTRA0A1W2PQU2 76 aa2.01□□□□□ -2.09
SCFD1-205ENST00000469043 ZNF815PA8K554 130 aa2.01□□□□□ -2.09
SCFD1-205ENST00000469043 SAA2P0DJI9 122 aaPredicted RBP2.01□□□□□ -2.09
SCFD1-205ENST00000469043 BAGE3Q86Y29 109 aa2.01□□□□□ -2.09
SCFD1-205ENST00000469043 TACC2O95359 2948 aa2.01□□□□□ -2.09
SCFD1-205ENST00000469043 APCP25054 2843 aa2.01□□□□□ -2.09
SCFD1-205ENST00000469043 MAP1AP78559 2803 aaPredicted RBP2.01□□□□□ -2.09
SCFD1-205ENST00000469043 WNK1Q9H4A3 2382 aa2□□□□□ -2.09
SCFD1-205ENST00000469043 CTXND1A0A1B0GTU2 59 aa2□□□□□ -2.09
SCFD1-205ENST00000469043 FAM223BA6NKX1 122 aa2□□□□□ -2.09
SCFD1-205ENST00000469043 J3QKU1 62 aa2□□□□□ -2.09
SCFD1-205ENST00000469043 PRB1P04280 392 aa2□□□□□ -2.09
SCFD1-205ENST00000469043 Q5BKY6 102 aa2□□□□□ -2.09
SCFD1-205ENST00000469043 MINOS1Q5TGZ0 78 aa2□□□□□ -2.09
SCFD1-205ENST00000469043 Q96NJ1 140 aa2□□□□□ -2.09
SCFD1-205ENST00000469043 MTORP42345 2549 aa2□□□□□ -2.09
SCFD1-205ENST00000469043 TEX15Q9BXT5 2789 aa2□□□□□ -2.09
SCFD1-205ENST00000469043 HIVEP2P31629 2446 aa2□□□□□ -2.09
SCFD1-205ENST00000469043 CELSR2Q9HCU4 2923 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms