RNA–Protein interactions for RNA: ENST00000468570.1

SGIP1-208, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 324 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-208ENST00000468570 SMIM13P0DJ93 91 aa0.33□□□□□ -2.36
SGIP1-208ENST00000468570 COX8AP10176 69 aa0.33□□□□□ -2.36
SGIP1-208ENST00000468570 IFI27P40305 119 aaPredicted RBP0.33□□□□□ -2.36
SGIP1-208ENST00000468570 DEFB123Q8N688 67 aa0.33□□□□□ -2.36
SGIP1-208ENST00000468570 MAP1BP46821 2468 aaKnown RBP0.33□□□□□ -2.36
SGIP1-208ENST00000468570 PRXQ9BXM0 1461 aa0.33□□□□□ -2.36
SGIP1-208ENST00000468570 PIEZO1Q92508 2521 aa0.33□□□□□ -2.36
SGIP1-208ENST00000468570 ZFHX4Q86UP3 3567 aa0.33□□□□□ -2.36
SGIP1-208ENST00000468570 C2CD3Q4AC94 2353 aa0.33□□□□□ -2.36
SGIP1-208ENST00000468570 UBR5O95071 2799 aaPredicted RBP0.33□□□□□ -2.36
SGIP1-208ENST00000468570 SPG11Q96JI7 2443 aa0.33□□□□□ -2.36
SGIP1-208ENST00000468570 BDP1A6H8Y1 2624 aa0.33□□□□□ -2.36
SGIP1-208ENST00000468570 COL6A5A8TX70 2615 aa0.33□□□□□ -2.36
SGIP1-208ENST00000468570 COL6A3P12111 3177 aa0.33□□□□□ -2.36
SGIP1-208ENST00000468570 TRANK1O15050 2925 aa0.32□□□□□ -2.36
SGIP1-208ENST00000468570 EEA1Q15075 1411 aa0.32□□□□□ -2.36
SGIP1-208ENST00000468570 BPTFQ12830 3046 aa0.32□□□□□ -2.36
SGIP1-208ENST00000468570 FXYD6-FXYD2A0A087WZ82 144 aa0.32□□□□□ -2.36
SGIP1-208ENST00000468570 TRAV21A0A0B4J279 112 aa0.32□□□□□ -2.36
SGIP1-208ENST00000468570 A0A1B0GU69 56 aa0.32□□□□□ -2.36
SGIP1-208ENST00000468570 SPINK6Q6UWN8 80 aa0.32□□□□□ -2.36
SGIP1-208ENST00000468570 HILPDAQ9Y5L2 63 aa0.32□□□□□ -2.36
SGIP1-208ENST00000468570 FRAS1Q86XX4 4008 aa0.32□□□□□ -2.36
SGIP1-208ENST00000468570 CSMD3Q7Z407 3707 aa0.32□□□□□ -2.36
SGIP1-208ENST00000468570 FASNP49327 2511 aaKnown RBP0.32□□□□□ -2.36
SGIP1-208ENST00000468570 CPS1P31327 1500 aa0.32□□□□□ -2.36
SGIP1-208ENST00000468570 ALMS1Q8TCU4 4167 aa0.32□□□□□ -2.36
SGIP1-208ENST00000468570 STAB1Q9NY15 2570 aa0.32□□□□□ -2.36
SGIP1-208ENST00000468570 NAV3Q8IVL0 2385 aa0.32□□□□□ -2.36
SGIP1-208ENST00000468570 FAM208BQ5VWN6 2430 aa0.32□□□□□ -2.36
SGIP1-208ENST00000468570 CEP250Q9BV73 2442 aa0.32□□□□□ -2.36
SGIP1-208ENST00000468570 ASXL3Q9C0F0 2248 aa0.32□□□□□ -2.36
SGIP1-208ENST00000468570 ZNF469Q96JG9 3925 aaPredicted RBP0.32□□□□□ -2.36
SGIP1-208ENST00000468570 CCDC168Q8NDH2 2452 aa0.31□□□□□ -2.36
SGIP1-208ENST00000468570 TTC28Q96AY4 2481 aa0.31□□□□□ -2.36
SGIP1-208ENST00000468570 ABCA5Q8WWZ7 1642 aa0.31□□□□□ -2.36
SGIP1-208ENST00000468570 SPTBN4Q9H254 2564 aa0.31□□□□□ -2.36
SGIP1-208ENST00000468570 PCNTO95613 3336 aa0.31□□□□□ -2.36
SGIP1-208ENST00000468570 EP300Q09472 2414 aaPredicted RBP0.31□□□□□ -2.36
SGIP1-208ENST00000468570 K7EQZ3 153 aa0.31□□□□□ -2.36
SGIP1-208ENST00000468570 PRH1P02810 166 aa0.31□□□□□ -2.36
SGIP1-208ENST00000468570 C3orf79P0CE67 100 aa0.31□□□□□ -2.36
SGIP1-208ENST00000468570 HAMPP81172 84 aa0.31□□□□□ -2.36
SGIP1-208ENST00000468570 NREPQ16612 68 aa0.31□□□□□ -2.36
SGIP1-208ENST00000468570 SSBP3-AS1Q7Z2R9 100 aa0.31□□□□□ -2.36
SGIP1-208ENST00000468570 S100ZQ8WXG8 99 aa0.31□□□□□ -2.36
SGIP1-208ENST00000468570 SMR3AQ99954 134 aa0.31□□□□□ -2.36
SGIP1-208ENST00000468570 TNCP24821 2201 aa0.31□□□□□ -2.36
SGIP1-208ENST00000468570 CEP290O15078 2479 aa0.31□□□□□ -2.36
SGIP1-208ENST00000468570 TLN1Q9Y490 2541 aaKnown RBP0.31□□□□□ -2.36
SGIP1-208ENST00000468570 UGGT1Q9NYU2 1555 aa0.31□□□□□ -2.36
SGIP1-208ENST00000468570 SETD2Q9BYW2 2564 aaPredicted RBP0.31□□□□□ -2.36
SGIP1-208ENST00000468570 VWFP04275 2813 aa0.31□□□□□ -2.36
SGIP1-208ENST00000468570 PRKDCP78527 4128 aaKnown RBP0.31□□□□□ -2.36
SGIP1-208ENST00000468570 GVINP1Q7Z2Y8 2422 aa0.3□□□□□ -2.36
SGIP1-208ENST00000468570 IQGAP1P46940 1657 aa0.3□□□□□ -2.36
SGIP1-208ENST00000468570 PCLOQ9Y6V0 5065 aa0.3□□□□□ -2.36
SGIP1-208ENST00000468570 PTPN13Q12923 2485 aa0.3□□□□□ -2.36
SGIP1-208ENST00000468570 TENM4Q6N022 2769 aa0.3□□□□□ -2.36
SGIP1-208ENST00000468570 ZFYVE26Q68DK2 2539 aa0.3□□□□□ -2.36
SGIP1-208ENST00000468570 FANCD2Q9BXW9 1451 aa0.3□□□□□ -2.36
SGIP1-208ENST00000468570 IGSF10Q6WRI0 2623 aa0.3□□□□□ -2.36
SGIP1-208ENST00000468570 CELSR2Q9HCU4 2923 aa0.3□□□□□ -2.36
SGIP1-208ENST00000468570 SFTA3P0C7M3 94 aa0.3□□□□□ -2.36
SGIP1-208ENST00000468570 COX7BP24311 80 aa0.3□□□□□ -2.36
SGIP1-208ENST00000468570 GNGT1P63211 74 aa0.3□□□□□ -2.36
SGIP1-208ENST00000468570 DEFB112Q30KQ8 113 aa0.3□□□□□ -2.36
SGIP1-208ENST00000468570 UBE2DNLQ8IWF7 75 aa0.3□□□□□ -2.36
SGIP1-208ENST00000468570 NBEAL2Q6ZNJ1 2754 aa0.3□□□□□ -2.36
SGIP1-208ENST00000468570 SPTBN5Q9NRC6 3674 aaKnown RBP0.3□□□□□ -2.36
SGIP1-208ENST00000468570 ANKHD1Q8IWZ3 2542 aaKnown RBP0.3□□□□□ -2.36
SGIP1-208ENST00000468570 RELNP78509 3460 aa0.3□□□□□ -2.36
SGIP1-208ENST00000468570 KIAA1109Q2LD37 5005 aa0.3□□□□□ -2.36
SGIP1-208ENST00000468570 FLNAP21333 2647 aaKnown RBP0.3□□□□□ -2.36
SGIP1-208ENST00000468570 NCOR1O75376 2440 aa0.29□□□□□ -2.36
SGIP1-208ENST00000468570 TEX15Q9BXT5 2789 aa0.29□□□□□ -2.36
SGIP1-208ENST00000468570 REV3LO60673 3130 aa0.29□□□□□ -2.36
SGIP1-208ENST00000468570 PDZD2O15018 2839 aa0.29□□□□□ -2.36
SGIP1-208ENST00000468570 NCOR2Q9Y618 2525 aa0.29□□□□□ -2.36
SGIP1-208ENST00000468570 PTPRZ1P23471 2315 aaPredicted RBP0.29□□□□□ -2.36
SGIP1-208ENST00000468570 CPSF4LA6NMK7 179 aaKnown RBP0.29□□□□□ -2.36
SGIP1-208ENST00000468570 NDUFB1O75438 58 aa0.29□□□□□ -2.36
SGIP1-208ENST00000468570 COX6A2Q02221 97 aa0.29□□□□□ -2.36
SGIP1-208ENST00000468570 CNFNQ9BYD5 112 aa0.29□□□□□ -2.36
SGIP1-208ENST00000468570 TP53AIP1Q9HCN2 124 aa0.29□□□□□ -2.36
SGIP1-208ENST00000468570 ACACBO00763 2458 aa0.29□□□□□ -2.36
SGIP1-208ENST00000468570 CHD9Q3L8U1 2897 aa0.29□□□□□ -2.36
SGIP1-208ENST00000468570 VCANP13611 3396 aa0.29□□□□□ -2.36
SGIP1-208ENST00000468570 SZT2Q5T011 3432 aa0.29□□□□□ -2.36
SGIP1-208ENST00000468570 NBEAL1Q6ZS30 2694 aa0.29□□□□□ -2.36
SGIP1-208ENST00000468570 TOP2AP11388 1531 aaKnown RBP0.28□□□□□ -2.36
SGIP1-208ENST00000468570 AGLP35573 1532 aa0.28□□□□□ -2.36
SGIP1-208ENST00000468570 KIAA0586Q9BVV6 1533 aa0.28□□□□□ -2.36
SGIP1-208ENST00000468570 UNC80Q8N2C7 3258 aa0.28□□□□□ -2.36
SGIP1-208ENST00000468570 MUC2Q02817 5179 aa0.28□□□□□ -2.36
SGIP1-208ENST00000468570 OTOGQ6ZRI0 2925 aa0.28□□□□□ -2.36
SGIP1-208ENST00000468570 BRCA2P51587 3418 aa0.28□□□□□ -2.36
SGIP1-208ENST00000468570 BSNQ9UPA5 3926 aa0.28□□□□□ -2.36
SGIP1-208ENST00000468570 CLTCL1P53675 1640 aa0.28□□□□□ -2.36
SGIP1-208ENST00000468570 USP34Q70CQ2 3546 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms