RNA–Protein interactions for RNA: ENST00000468570.1

SGIP1-208, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 324 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-208ENST00000468570 AEBP2Q6ZN18 517 aaPredicted RBP20.55■□□□□ 0.88
SGIP1-208ENST00000468570 CHIC1Q5VXU3 224 aa19■□□□□ 0.63
SGIP1-208ENST00000468570 SENP3Q9H4L4 574 aaPredicted RBP17.43■□□□□ 0.38
SGIP1-208ENST00000468570 PHF23Q9BUL5 403 aaPredicted RBP17.24■□□□□ 0.35
SGIP1-208ENST00000468570 FOXD1Q16676 465 aa16.43■□□□□ 0.22
SGIP1-208ENST00000468570 POTEDQ86YR6 584 aa15.95■□□□□ 0.14
SGIP1-208ENST00000468570 MSH5O43196 834 aa15.41■□□□□ 0.06
SGIP1-208ENST00000468570 PIAS4Q8N2W9 510 aaPredicted RBP15.12■□□□□ 0.01
SGIP1-208ENST00000468570 PPP6R1Q9UPN7 881 aa15.08■□□□□ 0
SGIP1-208ENST00000468570 ADRA2BP18089 450 aa14.94□□□□□ -0.02
SGIP1-208ENST00000468570 PLPPR3Q6T4P5 718 aa14.88□□□□□ -0.03
SGIP1-208ENST00000468570 MAPK8IP2Q13387 824 aaPredicted RBP13.9□□□□□ -0.18
SGIP1-208ENST00000468570 DMRT2Q9Y5R5 561 aa13.81□□□□□ -0.2
SGIP1-208ENST00000468570 CACNB1Q02641 598 aaPredicted RBP13.52□□□□□ -0.25
SGIP1-208ENST00000468570 SCAF1Q9H7N4 1312 aaKnown RBP13.5□□□□□ -0.25
SGIP1-208ENST00000468570 RNF39Q9H2S5 420 aa13.2□□□□□ -0.3
SGIP1-208ENST00000468570 DCAF8L1A6NGE4 600 aa13.15□□□□□ -0.3
SGIP1-208ENST00000468570 HOXD11P31277 338 aaPredicted RBP13.14□□□□□ -0.31
SGIP1-208ENST00000468570 PPP4R3CPQ6ZMV5 832 aa13.03□□□□□ -0.32
SGIP1-208ENST00000468570 C1QBPQ07021 282 aaKnown RBP12.92□□□□□ -0.34
SGIP1-208ENST00000468570 RNF216Q9NWF9 866 aaPredicted RBP12.88□□□□□ -0.35
SGIP1-208ENST00000468570 CNKSR2Q8WXI2 1034 aa12.86□□□□□ -0.35
SGIP1-208ENST00000468570 DNAJC5BQ9UF47 199 aa12.76□□□□□ -0.37
SGIP1-208ENST00000468570 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.41□□□□□ -0.42
SGIP1-208ENST00000468570 POTEHQ6S545 545 aa12.36□□□□□ -0.43
SGIP1-208ENST00000468570 NCBP3Q53F19 620 aaKnown RBP12.27□□□□□ -0.45
SGIP1-208ENST00000468570 NPM3O75607 178 aaKnown RBP12.23□□□□□ -0.45
SGIP1-208ENST00000468570 DSG3P32926 999 aa12.22□□□□□ -0.45
SGIP1-208ENST00000468570 U3KPZ7 1027 aaPredicted RBP12.2□□□□□ -0.46
SGIP1-208ENST00000468570 SPINK5Q9NQ38 1064 aaPredicted RBP12.18□□□□□ -0.46
SGIP1-208ENST00000468570 CAPN15O75808 1086 aa12.07□□□□□ -0.48
SGIP1-208ENST00000468570 SLC4A2P04920 1241 aa11.86□□□□□ -0.51
SGIP1-208ENST00000468570 ABCB7O75027 752 aa11.79□□□□□ -0.52
SGIP1-208ENST00000468570 TRHP20396 242 aaPredicted RBP11.78□□□□□ -0.52
SGIP1-208ENST00000468570 ZNF219Q9P2Y4 722 aaPredicted RBP11.7□□□□□ -0.54
SGIP1-208ENST00000468570 KCNA4P22459 653 aa11.6□□□□□ -0.55
SGIP1-208ENST00000468570 APLP2Q06481 763 aa11.6□□□□□ -0.55
SGIP1-208ENST00000468570 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.54□□□□□ -0.56
SGIP1-208ENST00000468570 HNRNPUL2Q1KMD3 747 aaKnown RBP11.54□□□□□ -0.56
SGIP1-208ENST00000468570 CHRDL2Q6WN34 429 aa11.54□□□□□ -0.56
SGIP1-208ENST00000468570 RBM42Q9BTD8 480 aaKnown RBP11.52□□□□□ -0.57
SGIP1-208ENST00000468570 SAMD1Q6SPF0 538 aaPredicted RBP11.48□□□□□ -0.57
SGIP1-208ENST00000468570 POLA2Q14181 598 aa11.41□□□□□ -0.58
SGIP1-208ENST00000468570 SP7Q8TDD2 431 aaPredicted RBP11.36□□□□□ -0.59
SGIP1-208ENST00000468570 MYCNP04198 464 aaPredicted RBP11.23□□□□□ -0.61
SGIP1-208ENST00000468570 AKT1S1Q96B36 256 aa11.23□□□□□ -0.61
SGIP1-208ENST00000468570 PIP4P2Q8N4L2 257 aa11.2□□□□□ -0.62
SGIP1-208ENST00000468570 REM2Q8IYK8 340 aaPredicted RBP11.17□□□□□ -0.62
SGIP1-208ENST00000468570 ATF5Q9Y2D1 282 aaPredicted RBP11.17□□□□□ -0.62
SGIP1-208ENST00000468570 FXR2P51116 673 aaKnown RBP eCLIP11.08□□□□□ -0.64
SGIP1-208ENST00000468570 HAX1O00165 279 aa11.07□□□□□ -0.64
SGIP1-208ENST00000468570 EVX2Q03828 476 aa11.06□□□□□ -0.64
SGIP1-208ENST00000468570 PITPNM1O00562 1244 aa11.04□□□□□ -0.64
SGIP1-208ENST00000468570 OSCARQ8IYS5 282 aa11.03□□□□□ -0.64
SGIP1-208ENST00000468570 ZBTB12Q9Y330 459 aaPredicted RBP11.01□□□□□ -0.65
SGIP1-208ENST00000468570 FOXD4L1Q9NU39 408 aa10.88□□□□□ -0.67
SGIP1-208ENST00000468570 SLC4A1APQ9BWU0 796 aaKnown RBP10.77□□□□□ -0.69
SGIP1-208ENST00000468570 C19orf67A6NJJ6 358 aa10.73□□□□□ -0.69
SGIP1-208ENST00000468570 PRKAR2AP13861 404 aaKnown RBP10.73□□□□□ -0.69
SGIP1-208ENST00000468570 SPDYE2BA6NHP3 402 aa10.71□□□□□ -0.69
SGIP1-208ENST00000468570 ZBTB22O15209 634 aa10.71□□□□□ -0.69
SGIP1-208ENST00000468570 SPDYE6P0CI01 402 aa10.71□□□□□ -0.69
SGIP1-208ENST00000468570 SPDYE2Q495Y8 402 aa10.71□□□□□ -0.69
SGIP1-208ENST00000468570 GABBR2O75899 941 aa10.69□□□□□ -0.7
SGIP1-208ENST00000468570 LHX8Q68G74 356 aa10.65□□□□□ -0.7
SGIP1-208ENST00000468570 MKRN4PQ13434 485 aaPredicted RBP10.62□□□□□ -0.71
SGIP1-208ENST00000468570 CLEC11AQ9Y240 323 aa10.62□□□□□ -0.71
SGIP1-208ENST00000468570 SPDYE1Q8NFV5 336 aaPredicted RBP10.61□□□□□ -0.71
SGIP1-208ENST00000468570 ATXN8OSP0DMR3 200 aa10.6□□□□□ -0.71
SGIP1-208ENST00000468570 SSUH2Q9Y2M2 353 aa10.57□□□□□ -0.72
SGIP1-208ENST00000468570 FBLN2P98095 1184 aa10.55□□□□□ -0.72
SGIP1-208ENST00000468570 POTEIP0CG38 1075 aa10.54□□□□□ -0.72
SGIP1-208ENST00000468570 CHADLQ6NUI6 762 aa10.54□□□□□ -0.72
SGIP1-208ENST00000468570 ZNF692Q9BU19 519 aaPredicted RBP10.51□□□□□ -0.73
SGIP1-208ENST00000468570 PRR29P0C7W0 189 aa10.39□□□□□ -0.75
SGIP1-208ENST00000468570 PABPN1Q86U42 306 aaKnown RBP eCLIP10.36□□□□□ -0.75
SGIP1-208ENST00000468570 CD44P16070 742 aaKnown RBP10.33□□□□□ -0.76
SGIP1-208ENST00000468570 FARP1Q9Y4F1 1045 aaPredicted RBP10.32□□□□□ -0.76
SGIP1-208ENST00000468570 PLSCR2Q9NRY7 297 aa10.28□□□□□ -0.76
SGIP1-208ENST00000468570 CLCN6P51797 869 aa10.25□□□□□ -0.77
SGIP1-208ENST00000468570 POTEB2H3BUK9 544 aa10.2□□□□□ -0.78
SGIP1-208ENST00000468570 OTUD5Q96G74 571 aa10.2□□□□□ -0.78
SGIP1-208ENST00000468570 DCBLD2Q96PD2 775 aa10.2□□□□□ -0.78
SGIP1-208ENST00000468570 ZNF579Q8NAF0 562 aaKnown RBP10.18□□□□□ -0.78
SGIP1-208ENST00000468570 GALR2O43603 387 aaPredicted RBP10.13□□□□□ -0.79
SGIP1-208ENST00000468570 ZRANB1Q9UGI0 708 aa10.13□□□□□ -0.79
SGIP1-208ENST00000468570 CREBZFQ9NS37 354 aa10.11□□□□□ -0.79
SGIP1-208ENST00000468570 PELP1Q8IZL8 1130 aaKnown RBP10.05□□□□□ -0.8
SGIP1-208ENST00000468570 POTEMA6NI47 508 aa10.04□□□□□ -0.8
SGIP1-208ENST00000468570 POTEGQ6S5H5 508 aa10□□□□□ -0.81
SGIP1-208ENST00000468570 POTEJP0CG39 1038 aa9.98□□□□□ -0.81
SGIP1-208ENST00000468570 PHF12Q96QT6 1004 aa9.98□□□□□ -0.81
SGIP1-208ENST00000468570 MNX1P50219 401 aaPredicted RBP9.93□□□□□ -0.82
SGIP1-208ENST00000468570 LCE2DQ5TA82 110 aaPredicted RBP9.91□□□□□ -0.82
SGIP1-208ENST00000468570 STAG3Q9UJ98 1225 aa9.9□□□□□ -0.82
SGIP1-208ENST00000468570 ASTLQ6HA08 431 aaPredicted RBP9.88□□□□□ -0.83
SGIP1-208ENST00000468570 PCDH10Q9P2E7 1040 aa9.87□□□□□ -0.83
SGIP1-208ENST00000468570 ATMINO43313 823 aaPredicted RBP9.85□□□□□ -0.83
SGIP1-208ENST00000468570 MS4A3Q96HJ5 214 aa9.83□□□□□ -0.84
SGIP1-208ENST00000468570 METRNQ9UJH8 293 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms