RNA–Protein interactions for RNA: ENST00000468347.1

SHQ1-204, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 134 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-204ENST00000468347 G0S2P27469 103 aa-2.05□□□□□ -2.74
SHQ1-204ENST00000468347 SERP2Q8N6R1 65 aa-2.05□□□□□ -2.74
SHQ1-204ENST00000468347 SMIM3Q9BZL3 60 aa-2.05□□□□□ -2.74
SHQ1-204ENST00000468347 V9GYQ6 96 aa-2.05□□□□□ -2.74
SHQ1-204ENST00000468347 PLCH1Q4KWH8 1693 aa-2.06□□□□□ -2.74
SHQ1-204ENST00000468347 DEPDC5O75140 1603 aa-2.06□□□□□ -2.74
SHQ1-204ENST00000468347 MAGI3Q5TCQ9 1506 aa-2.06□□□□□ -2.74
SHQ1-204ENST00000468347 SCTP09683 121 aa-2.06□□□□□ -2.74
SHQ1-204ENST00000468347 RPS29P62273 56 aaKnown RBP-2.06□□□□□ -2.74
SHQ1-204ENST00000468347 COX6B2Q6YFQ2 88 aa-2.06□□□□□ -2.74
SHQ1-204ENST00000468347 MMGT1Q8N4V1 131 aa-2.06□□□□□ -2.74
SHQ1-204ENST00000468347 SNRNP25Q9BV90 132 aaKnown RBP-2.06□□□□□ -2.74
SHQ1-204ENST00000468347 SPANXDQ9BXN6 97 aa-2.06□□□□□ -2.74
SHQ1-204ENST00000468347 A0A1B0GUL6 1792 aa-2.06□□□□□ -2.74
SHQ1-204ENST00000468347 MRC2Q9UBG0 1479 aa-2.07□□□□□ -2.74
SHQ1-204ENST00000468347 SUPT6HQ7KZ85 1726 aaKnown RBP-2.07□□□□□ -2.74
SHQ1-204ENST00000468347 MIF4GDA9UHW6 222 aaKnown RBP-2.07□□□□□ -2.74
SHQ1-204ENST00000468347 C3orf79P0CE67 100 aa-2.07□□□□□ -2.74
SHQ1-204ENST00000468347 Q56UQ5 140 aa-2.07□□□□□ -2.74
SHQ1-204ENST00000468347 PSMG4Q5JS54 123 aa-2.07□□□□□ -2.74
SHQ1-204ENST00000468347 KCNRGQ8N5I3 272 aa-2.07□□□□□ -2.74
SHQ1-204ENST00000468347 PDCD10Q9BUL8 212 aa-2.07□□□□□ -2.74
SHQ1-204ENST00000468347 ITSN2Q9NZM3 1697 aa-2.07□□□□□ -2.74
SHQ1-204ENST00000468347 MUC3AQ02505 3323 aa-2.07□□□□□ -2.74
SHQ1-204ENST00000468347 LRRC7Q96NW7 1537 aa-2.07□□□□□ -2.74
SHQ1-204ENST00000468347 FAM135AQ9P2D6 1515 aa-2.07□□□□□ -2.74
SHQ1-204ENST00000468347 LRRC9Q6ZRR7 1453 aa-2.07□□□□□ -2.74
SHQ1-204ENST00000468347 A0A1B0GX51 115 aa-2.08□□□□□ -2.74
SHQ1-204ENST00000468347 F8WEM9 126 aa-2.08□□□□□ -2.74
SHQ1-204ENST00000468347 K7ERU9 68 aa-2.08□□□□□ -2.74
SHQ1-204ENST00000468347 GNG11P61952 73 aa-2.08□□□□□ -2.74
SHQ1-204ENST00000468347 MRPS25P82663 173 aaKnown RBP-2.08□□□□□ -2.74
SHQ1-204ENST00000468347 TFAMQ00059 246 aaKnown RBP-2.08□□□□□ -2.74
SHQ1-204ENST00000468347 COMMD6Q7Z4G1 85 aa-2.08□□□□□ -2.74
SHQ1-204ENST00000468347 MAGOHBQ96A72 148 aaKnown RBP-2.08□□□□□ -2.74
SHQ1-204ENST00000468347 DPH3Q96FX2 82 aa-2.08□□□□□ -2.74
SHQ1-204ENST00000468347 PCBD2Q9H0N5 130 aa-2.08□□□□□ -2.74
SHQ1-204ENST00000468347 ABCC5O15440 1437 aa-2.08□□□□□ -2.74
SHQ1-204ENST00000468347 MYH4Q9Y623 1939 aa-2.09□□□□□ -2.74
SHQ1-204ENST00000468347 FOCADQ5VW36 1801 aa-2.09□□□□□ -2.74
SHQ1-204ENST00000468347 LYNX1G3V0Z9 82 aa-2.09□□□□□ -2.74
SHQ1-204ENST00000468347 IFI6P09912 130 aa-2.09□□□□□ -2.74
SHQ1-204ENST00000468347 TRIQKQ629K1 86 aa-2.09□□□□□ -2.74
SHQ1-204ENST00000468347 C12orf57Q99622 126 aa-2.09□□□□□ -2.74
SHQ1-204ENST00000468347 BOLA2Q9H3K6 86 aa-2.09□□□□□ -2.74
SHQ1-204ENST00000468347 TIMM8BQ9Y5J9 83 aaPredicted RBP-2.09□□□□□ -2.74
SHQ1-204ENST00000468347 CHD1O14646 1710 aa-2.09□□□□□ -2.74
SHQ1-204ENST00000468347 EP400Q96L91 3159 aa-2.09□□□□□ -2.74
SHQ1-204ENST00000468347 M0QX08 132 aa-2.1□□□□□ -2.75
SHQ1-204ENST00000468347 S100GP29377 79 aa-2.1□□□□□ -2.75
SHQ1-204ENST00000468347 CATR1Q13166 79 aa-2.1□□□□□ -2.75
SHQ1-204ENST00000468347 TRGV9Q99603 122 aa-2.1□□□□□ -2.75
SHQ1-204ENST00000468347 PRO1854Q9UHT4 67 aa-2.1□□□□□ -2.75
SHQ1-204ENST00000468347 CFTRP13569 1480 aa-2.1□□□□□ -2.75
SHQ1-204ENST00000468347 DNAH14Q0VDD8 3507 aa-2.1□□□□□ -2.75
SHQ1-204ENST00000468347 OVOS2A0A0J9YW53 1432 aa-2.1□□□□□ -2.75
SHQ1-204ENST00000468347 OVOS2Q6IE36 1432 aa-2.1□□□□□ -2.75
SHQ1-204ENST00000468347 CC2D2AQ9P2K1 1620 aa-2.1□□□□□ -2.75
SHQ1-204ENST00000468347 NWD1Q149M9 1564 aa-2.1□□□□□ -2.75
SHQ1-204ENST00000468347 KIF1AQ12756 1690 aa-2.11□□□□□ -2.75
SHQ1-204ENST00000468347 OOSP1A8MZH6 123 aa-2.11□□□□□ -2.75
SHQ1-204ENST00000468347 MT-ATP8P03928 68 aa-2.11□□□□□ -2.75
SHQ1-204ENST00000468347 TOMM20LQ6UXN7 152 aa-2.11□□□□□ -2.75
SHQ1-204ENST00000468347 AP4S1Q9Y587 144 aa-2.11□□□□□ -2.75
SHQ1-204ENST00000468347 SERP1Q9Y6X1 66 aa-2.11□□□□□ -2.75
SHQ1-204ENST00000468347 PFDN1O60925 122 aa-2.12□□□□□ -2.75
SHQ1-204ENST00000468347 TSPAN19P0C672 248 aa-2.12□□□□□ -2.75
SHQ1-204ENST00000468347 SCGB1A1P11684 91 aa-2.12□□□□□ -2.75
SHQ1-204ENST00000468347 GUCA1AP43080 201 aaPredicted RBP-2.12□□□□□ -2.75
SHQ1-204ENST00000468347 GNG10P50151 68 aa-2.12□□□□□ -2.75
SHQ1-204ENST00000468347 MORN2Q502X0 79 aa-2.12□□□□□ -2.75
SHQ1-204ENST00000468347 ARL11Q969Q4 196 aa-2.12□□□□□ -2.75
SHQ1-204ENST00000468347 FHAD1B1AJZ9 1412 aa-2.12□□□□□ -2.75
SHQ1-204ENST00000468347 SCAPERQ9BY12 1400 aa-2.12□□□□□ -2.75
SHQ1-204ENST00000468347 ERVK-7P63135 1459 aa-2.13□□□□□ -2.75
SHQ1-204ENST00000468347 M0QZ58 72 aa-2.13□□□□□ -2.75
SHQ1-204ENST00000468347 COX6CP09669 75 aa-2.13□□□□□ -2.75
SHQ1-204ENST00000468347 WT1-ASQ06250 92 aa-2.13□□□□□ -2.75
SHQ1-204ENST00000468347 RGS21Q2M5E4 152 aa-2.13□□□□□ -2.75
SHQ1-204ENST00000468347 C12orf73Q69YU5 71 aa-2.13□□□□□ -2.75
SHQ1-204ENST00000468347 TSTD1Q8NFU3 115 aa-2.13□□□□□ -2.75
SHQ1-204ENST00000468347 ATPIF1Q9UII2 106 aa-2.13□□□□□ -2.75
SHQ1-204ENST00000468347 DDX60LQ5H9U9 1706 aaKnown RBP-2.14□□□□□ -2.75
SHQ1-204ENST00000468347 CRYM-AS1A6NIL9 109 aa-2.14□□□□□ -2.75
SHQ1-204ENST00000468347 LEPROTL1O95214 131 aa-2.14□□□□□ -2.75
SHQ1-204ENST00000468347 SPART-AS1P0CW21 52 aa-2.14□□□□□ -2.75
SHQ1-204ENST00000468347 SMIM21Q3B7S5 101 aa-2.14□□□□□ -2.75
SHQ1-204ENST00000468347 CCDC153Q494R4 210 aa-2.14□□□□□ -2.75
SHQ1-204ENST00000468347 NCBP2-AS2Q69YL0 99 aa-2.14□□□□□ -2.75
SHQ1-204ENST00000468347 GAFA1Q96PS6 74 aa-2.14□□□□□ -2.75
SHQ1-204ENST00000468347 NRXN1Q9ULB1 1477 aa-2.14□□□□□ -2.75
SHQ1-204ENST00000468347 BAZ1AQ9NRL2 1556 aaPredicted RBP-2.15□□□□□ -2.75
SHQ1-204ENST00000468347 LTN1O94822 1766 aa-2.15□□□□□ -2.75
SHQ1-204ENST00000468347 TMEM131LA2VDJ0 1609 aa-2.15□□□□□ -2.75
SHQ1-204ENST00000468347 PIGBOS1A0A0B4J2F0 54 aa-2.15□□□□□ -2.75
SHQ1-204ENST00000468347 TMEM218A2RU14 115 aa-2.15□□□□□ -2.75
SHQ1-204ENST00000468347 RPS25P62851 125 aaKnown RBP-2.15□□□□□ -2.75
SHQ1-204ENST00000468347 SMCO1Q147U7 214 aa-2.15□□□□□ -2.75
SHQ1-204ENST00000468347 PPP3R2Q96LZ3 170 aa-2.15□□□□□ -2.75
SHQ1-204ENST00000468347 VAMP8Q9BV40 100 aa-2.15□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms