RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 TROQ12816 1431 aaPredicted RBP-0.38□□□□□ -2.47
GARNL3-213ENST00000464616 PRKDCP78527 4128 aaKnown RBP-0.39□□□□□ -2.47
GARNL3-213ENST00000464616 HECTD4Q9Y4D8 3996 aa-0.39□□□□□ -2.47
GARNL3-213ENST00000464616 AKAP13Q12802 2813 aa-0.39□□□□□ -2.47
GARNL3-213ENST00000464616 FLNBO75369 2602 aaKnown RBP-0.39□□□□□ -2.47
GARNL3-213ENST00000464616 FASNP49327 2511 aaKnown RBP-0.39□□□□□ -2.47
GARNL3-213ENST00000464616 SPRR2AP35326 72 aa-0.39□□□□□ -2.47
GARNL3-213ENST00000464616 ALKQ9UM73 1620 aa-0.39□□□□□ -2.47
GARNL3-213ENST00000464616 ABCC10Q5T3U5 1492 aa-0.4□□□□□ -2.47
GARNL3-213ENST00000464616 COX7BP24311 80 aa-0.4□□□□□ -2.47
GARNL3-213ENST00000464616 PYY3Q5JQD4 70 aa-0.4□□□□□ -2.47
GARNL3-213ENST00000464616 RNF213Q63HN8 5207 aa-0.4□□□□□ -2.47
GARNL3-213ENST00000464616 STARD9Q9P2P6 4700 aa-0.4□□□□□ -2.47
GARNL3-213ENST00000464616 MAGI2Q86UL8 1455 aa-0.41□□□□□ -2.47
GARNL3-213ENST00000464616 H0YGG7 62 aa-0.41□□□□□ -2.48
GARNL3-213ENST00000464616 KRTAP20-2Q3LI61 65 aa-0.41□□□□□ -2.48
GARNL3-213ENST00000464616 WFDC13Q8IUB5 93 aa-0.41□□□□□ -2.48
GARNL3-213ENST00000464616 SNHG12Q9BXW3 62 aa-0.41□□□□□ -2.48
GARNL3-213ENST00000464616 WDR87Q6ZQQ6 2873 aa-0.41□□□□□ -2.48
GARNL3-213ENST00000464616 MXRA5Q9NR99 2828 aa-0.42□□□□□ -2.48
GARNL3-213ENST00000464616 RGPD4Q7Z3J3 1758 aa-0.42□□□□□ -2.48
GARNL3-213ENST00000464616 KRTAP19-7Q3SYF9 63 aa-0.42□□□□□ -2.48
GARNL3-213ENST00000464616 Q9H521 79 aa-0.42□□□□□ -2.48
GARNL3-213ENST00000464616 RIF1Q5UIP0 2472 aaKnown RBP-0.42□□□□□ -2.48
GARNL3-213ENST00000464616 LRRC9Q6ZRR7 1453 aa-0.42□□□□□ -2.48
GARNL3-213ENST00000464616 MYO3AQ8NEV4 1616 aa-0.42□□□□□ -2.48
GARNL3-213ENST00000464616 SONP18583 2426 aaKnown RBP-0.43□□□□□ -2.48
GARNL3-213ENST00000464616 CCNB3Q8WWL7 1395 aa-0.43□□□□□ -2.48
GARNL3-213ENST00000464616 ATRQ13535 2644 aa-0.43□□□□□ -2.48
GARNL3-213ENST00000464616 MGAM2Q2M2H8 2515 aa-0.43□□□□□ -2.48
GARNL3-213ENST00000464616 PREX1Q8TCU6 1659 aa-0.43□□□□□ -2.48
GARNL3-213ENST00000464616 BIRC6Q9NR09 4857 aa-0.43□□□□□ -2.48
GARNL3-213ENST00000464616 TIAM2Q8IVF5 1701 aa-0.44□□□□□ -2.48
GARNL3-213ENST00000464616 RYR2Q92736 4967 aa-0.44□□□□□ -2.48
GARNL3-213ENST00000464616 GAFA1Q96PS6 74 aa-0.44□□□□□ -2.48
GARNL3-213ENST00000464616 RABAC1Q9UI14 185 aa-0.44□□□□□ -2.48
GARNL3-213ENST00000464616 ATP7BP35670 1465 aa-0.44□□□□□ -2.48
GARNL3-213ENST00000464616 MYO18BQ8IUG5 2567 aa-0.45□□□□□ -2.48
GARNL3-213ENST00000464616 PTPN23Q9H3S7 1636 aa-0.45□□□□□ -2.48
GARNL3-213ENST00000464616 CEP162Q5TB80 1403 aa-0.45□□□□□ -2.48
GARNL3-213ENST00000464616 IQCF6A8MYZ5 107 aa-0.45□□□□□ -2.48
GARNL3-213ENST00000464616 NDUFB1O75438 58 aa-0.45□□□□□ -2.48
GARNL3-213ENST00000464616 SNRPFP62306 86 aaKnown RBP-0.45□□□□□ -2.48
GARNL3-213ENST00000464616 V9GYS6 101 aa-0.45□□□□□ -2.48
GARNL3-213ENST00000464616 RGPD3A6NKT7 1758 aaPredicted RBP-0.45□□□□□ -2.48
GARNL3-213ENST00000464616 PLIN4Q96Q06 1357 aa-0.45□□□□□ -2.48
GARNL3-213ENST00000464616 PVALEFA0A1B0GWK0 134 aa-0.46□□□□□ -2.48
GARNL3-213ENST00000464616 ACYP1P07311 99 aa-0.46□□□□□ -2.48
GARNL3-213ENST00000464616 C20orf78Q9BR46 151 aa-0.46□□□□□ -2.48
GARNL3-213ENST00000464616 PCNX1Q96RV3 2341 aa-0.46□□□□□ -2.48
GARNL3-213ENST00000464616 COL6A3P12111 3177 aa-0.46□□□□□ -2.48
GARNL3-213ENST00000464616 CICQ96RK0 1608 aaPredicted RBP-0.46□□□□□ -2.48
GARNL3-213ENST00000464616 TEX15Q9BXT5 2789 aa-0.47□□□□□ -2.49
GARNL3-213ENST00000464616 LAMA5O15230 3695 aa-0.48□□□□□ -2.49
GARNL3-213ENST00000464616 LRRC7Q96NW7 1537 aa-0.48□□□□□ -2.49
GARNL3-213ENST00000464616 ADAMTS12P58397 1594 aa-0.48□□□□□ -2.49
GARNL3-213ENST00000464616 CNOT1A5YKK6 2376 aaKnown RBP-0.48□□□□□ -2.49
GARNL3-213ENST00000464616 MYMXA0A1B0GTQ4 84 aa-0.48□□□□□ -2.49
GARNL3-213ENST00000464616 C3orf79P0CE67 100 aa-0.48□□□□□ -2.49
GARNL3-213ENST00000464616 LINC00643Q86TS7 51 aa-0.48□□□□□ -2.49
GARNL3-213ENST00000464616 ABCC3O15438 1527 aa-0.48□□□□□ -2.49
GARNL3-213ENST00000464616 SUPT6HQ7KZ85 1726 aaKnown RBP-0.49□□□□□ -2.49
GARNL3-213ENST00000464616 COL6A5A8TX70 2615 aa-0.5□□□□□ -2.49
GARNL3-213ENST00000464616 LTN1O94822 1766 aa-0.5□□□□□ -2.49
GARNL3-213ENST00000464616 SPRR2EP22531 72 aa-0.5□□□□□ -2.49
GARNL3-213ENST00000464616 S100A16Q96FQ6 103 aaKnown RBP-0.5□□□□□ -2.49
GARNL3-213ENST00000464616 NBEAL2Q6ZNJ1 2754 aa-0.5□□□□□ -2.49
GARNL3-213ENST00000464616 NEXMIFQ5QGS0 1516 aa-0.5□□□□□ -2.49
GARNL3-213ENST00000464616 COL12A1Q99715 3063 aa-0.5□□□□□ -2.49
GARNL3-213ENST00000464616 UBR1Q8IWV7 1749 aa-0.5□□□□□ -2.49
GARNL3-213ENST00000464616 ITPR1Q14643 2758 aa-0.51□□□□□ -2.49
GARNL3-213ENST00000464616 LAMA2P24043 3122 aaKnown RBP-0.51□□□□□ -2.49
GARNL3-213ENST00000464616 HMGA1P17096 107 aaKnown RBP-0.51□□□□□ -2.49
GARNL3-213ENST00000464616 LELP1Q5T871 98 aa-0.51□□□□□ -2.49
GARNL3-213ENST00000464616 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.51□□□□□ -2.497e-8■■■■■ 48.5
GARNL3-213ENST00000464616 TTC37Q6PGP7 1564 aa-0.51□□□□□ -2.49
GARNL3-213ENST00000464616 WFDC9Q8NEX5 89 aa-0.51□□□□□ -2.49
GARNL3-213ENST00000464616 NBPF19A0A087WUL8 3843 aa-0.51□□□□□ -2.49
GARNL3-213ENST00000464616 TRAV21A0A0B4J279 112 aa-0.52□□□□□ -2.49
GARNL3-213ENST00000464616 CEBPZOSA8MTT3 80 aa-0.52□□□□□ -2.49
GARNL3-213ENST00000464616 K7EP34 96 aa-0.52□□□□□ -2.49
GARNL3-213ENST00000464616 NDUFA3O95167 84 aa-0.52□□□□□ -2.49
GARNL3-213ENST00000464616 MT4P47944 62 aa-0.52□□□□□ -2.49
GARNL3-213ENST00000464616 KRTAP19-8Q3LI54 63 aa-0.52□□□□□ -2.49
GARNL3-213ENST00000464616 KRTAP6-2Q3LI66 62 aa-0.52□□□□□ -2.49
GARNL3-213ENST00000464616 ABCA13Q86UQ4 5058 aa-0.52□□□□□ -2.49
GARNL3-213ENST00000464616 RGPD1P0DJD0 1748 aa-0.52□□□□□ -2.49
GARNL3-213ENST00000464616 KANTRA0A1W2PQU2 76 aa-0.53□□□□□ -2.49
GARNL3-213ENST00000464616 PPLO60437 1756 aa-0.53□□□□□ -2.49
GARNL3-213ENST00000464616 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.53□□□□□ -2.49
GARNL3-213ENST00000464616 GCN1Q92616 2671 aaKnown RBP-0.54□□□□□ -2.5
GARNL3-213ENST00000464616 MTORP42345 2549 aa-0.54□□□□□ -2.5
GARNL3-213ENST00000464616 URB2Q14146 1524 aaKnown RBP-0.54□□□□□ -2.5
GARNL3-213ENST00000464616 POLR1AO95602 1720 aaPredicted RBP-0.55□□□□□ -2.5
GARNL3-213ENST00000464616 C4AP0C0L4 1744 aa-0.55□□□□□ -2.5
GARNL3-213ENST00000464616 C4BP0C0L5 1744 aa-0.55□□□□□ -2.5
GARNL3-213ENST00000464616 MAP3K4Q9Y6R4 1608 aa-0.55□□□□□ -2.5
GARNL3-213ENST00000464616 PRO3102Q9H379 93 aa-0.55□□□□□ -2.5
GARNL3-213ENST00000464616 FLGP20930 4061 aaPredicted RBP-0.55□□□□□ -2.5
GARNL3-213ENST00000464616 CEP295Q9C0D2 2601 aa-0.55□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms