RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 IGLC2P0DOY2 106 aa-1.5□□□□□ -2.65
PTPN12-210ENST00000464313 IGLC3P0DOY3 106 aa-1.5□□□□□ -2.65
PTPN12-210ENST00000464313 S100A10P60903 97 aa-1.5□□□□□ -2.65
PTPN12-210ENST00000464313 SERP2Q8N6R1 65 aa-1.5□□□□□ -2.65
PTPN12-210ENST00000464313 KIF20BQ96Q89 1820 aa-1.51□□□□□ -2.65
PTPN12-210ENST00000464313 ATOX1O00244 68 aa-1.51□□□□□ -2.65
PTPN12-210ENST00000464313 BCORQ6W2J9 1755 aa-1.52□□□□□ -2.65
PTPN12-210ENST00000464313 HTTP42858 3142 aa-1.52□□□□□ -2.65
PTPN12-210ENST00000464313 SPG11Q96JI7 2443 aa-1.52□□□□□ -2.65
PTPN12-210ENST00000464313 RIF1Q5UIP0 2472 aaKnown RBP-1.52□□□□□ -2.65
PTPN12-210ENST00000464313 D6R8Y8 96 aa-1.52□□□□□ -2.65
PTPN12-210ENST00000464313 LEPROTL1O95214 131 aa-1.52□□□□□ -2.65
PTPN12-210ENST00000464313 MUSTN1Q8IVN3 82 aa-1.52□□□□□ -2.65
PTPN12-210ENST00000464313 ITPR2Q14571 2701 aa-1.52□□□□□ -2.65
PTPN12-210ENST00000464313 TRANK1O15050 2925 aa-1.52□□□□□ -2.65
PTPN12-210ENST00000464313 ABCC2Q92887 1545 aa-1.52□□□□□ -2.65
PTPN12-210ENST00000464313 MTORP42345 2549 aa-1.52□□□□□ -2.65
PTPN12-210ENST00000464313 VPS13DQ5THJ4 4388 aa-1.53□□□□□ -2.65
PTPN12-210ENST00000464313 GCN1Q92616 2671 aaKnown RBP-1.53□□□□□ -2.65
PTPN12-210ENST00000464313 CCDC168Q8NDH2 2452 aa-1.54□□□□□ -2.66
PTPN12-210ENST00000464313 ANK3Q12955 4377 aaKnown RBP-1.54□□□□□ -2.66
PTPN12-210ENST00000464313 F8WEM9 126 aa-1.54□□□□□ -2.66
PTPN12-210ENST00000464313 ETDBQ3ZM63 59 aa-1.54□□□□□ -2.66
PTPN12-210ENST00000464313 CICQ96RK0 1608 aaPredicted RBP-1.55□□□□□ -2.66
PTPN12-210ENST00000464313 COL5A1-AS1Q5SY13 56 aa-1.55□□□□□ -2.66
PTPN12-210ENST00000464313 HMGN3Q15651 99 aa-1.56□□□□□ -2.66
PTPN12-210ENST00000464313 ALKAL2Q6UX46 152 aa-1.56□□□□□ -2.66
PTPN12-210ENST00000464313 ZNF720Q7Z2F6 126 aa-1.56□□□□□ -2.66
PTPN12-210ENST00000464313 C14orf144Q96I85 54 aa-1.56□□□□□ -2.66
PTPN12-210ENST00000464313 TROQ12816 1431 aaPredicted RBP-1.57□□□□□ -2.66
PTPN12-210ENST00000464313 RGPD2P0DJD1 1756 aa-1.57□□□□□ -2.66
PTPN12-210ENST00000464313 S100PP25815 95 aa-1.57□□□□□ -2.66
PTPN12-210ENST00000464313 FAUP35544 74 aaKnown RBP-1.57□□□□□ -2.66
PTPN12-210ENST00000464313 LRRK2Q5S007 2527 aa-1.58□□□□□ -2.66
PTPN12-210ENST00000464313 SPRR2FQ96RM1 72 aa-1.58□□□□□ -2.66
PTPN12-210ENST00000464313 CRYBG1Q9Y4K1 1723 aa-1.58□□□□□ -2.66
PTPN12-210ENST00000464313 CEP295Q9C0D2 2601 aa-1.59□□□□□ -2.66
PTPN12-210ENST00000464313 UQCRHLA0A096LP55 91 aa-1.59□□□□□ -2.66
PTPN12-210ENST00000464313 NMSQ5H8A3 153 aa-1.59□□□□□ -2.66
PTPN12-210ENST00000464313 AKAP9Q99996 3911 aa-1.59□□□□□ -2.66
PTPN12-210ENST00000464313 PDE4DIPQ5VU43 2346 aa-1.6□□□□□ -2.66
PTPN12-210ENST00000464313 CUBNO60494 3623 aa-1.6□□□□□ -2.67
PTPN12-210ENST00000464313 UBR3Q6ZT12 1888 aa-1.6□□□□□ -2.67
PTPN12-210ENST00000464313 NBEAQ8NFP9 2946 aa-1.61□□□□□ -2.67
PTPN12-210ENST00000464313 ATP6V1G2-DDX39BF2Z307 99 aa-1.61□□□□□ -2.67
PTPN12-210ENST00000464313 MAGI2Q86UL8 1455 aa-1.62□□□□□ -2.67
PTPN12-210ENST00000464313 LINC00032P0C843 101 aa-1.62□□□□□ -2.67
PTPN12-210ENST00000464313 COX7BP24311 80 aa-1.62□□□□□ -2.67
PTPN12-210ENST00000464313 SRCAPQ6ZRS2 3230 aa-1.62□□□□□ -2.67
PTPN12-210ENST00000464313 NDUFA3O95167 84 aa-1.63□□□□□ -2.67
PTPN12-210ENST00000464313 MT1AP04731 61 aa-1.63□□□□□ -2.67
PTPN12-210ENST00000464313 UBE2D4Q9Y2X8 147 aa-1.63□□□□□ -2.67
PTPN12-210ENST00000464313 DNAH9Q9NYC9 4486 aa-1.63□□□□□ -2.67
PTPN12-210ENST00000464313 TCEAL7Q9BRU2 100 aa-1.64□□□□□ -2.67
PTPN12-210ENST00000464313 DPY30Q9C005 99 aa-1.64□□□□□ -2.67
PTPN12-210ENST00000464313 QSER1Q2KHR3 1735 aa-1.64□□□□□ -2.67
PTPN12-210ENST00000464313 PKD1L3Q7Z443 1732 aa-1.64□□□□□ -2.67
PTPN12-210ENST00000464313 A0A0C4DFX4 3053 aa-1.64□□□□□ -2.67
PTPN12-210ENST00000464313 FYCO1Q9BQS8 1478 aa-1.64□□□□□ -2.67
PTPN12-210ENST00000464313 MYH4Q9Y623 1939 aa-1.64□□□□□ -2.67
PTPN12-210ENST00000464313 H3BNG1 76 aa-1.65□□□□□ -2.67
PTPN12-210ENST00000464313 TEX14Q8IWB6 1497 aa-1.65□□□□□ -2.67
PTPN12-210ENST00000464313 CFAP46Q8IYW2 2715 aa-1.66□□□□□ -2.67
PTPN12-210ENST00000464313 CLTCQ00610 1675 aaKnown RBP-1.66□□□□□ -2.68
PTPN12-210ENST00000464313 RBP2P50120 134 aa-1.66□□□□□ -2.68
PTPN12-210ENST00000464313 KRTAP20-1Q3LI63 56 aa-1.66□□□□□ -2.68
PTPN12-210ENST00000464313 DMXL1Q9Y485 3027 aa-1.66□□□□□ -2.68
PTPN12-210ENST00000464313 DYNC1H1Q14204 4646 aaKnown RBP-1.67□□□□□ -2.68
PTPN12-210ENST00000464313 PREX1Q8TCU6 1659 aa-1.67□□□□□ -2.68
PTPN12-210ENST00000464313 ZZEF1O43149 2961 aa-1.67□□□□□ -2.68
PTPN12-210ENST00000464313 UTP20O75691 2785 aaKnown RBP-1.67□□□□□ -2.68
PTPN12-210ENST00000464313 ACACAQ13085 2346 aa-1.67□□□□□ -2.68
PTPN12-210ENST00000464313 PKD1L2Q7Z442 2459 aa-1.67□□□□□ -2.68
PTPN12-210ENST00000464313 CMYA5Q8N3K9 4069 aa-1.68□□□□□ -2.68
PTPN12-210ENST00000464313 NCMAPQ5T1S8 102 aa-1.68□□□□□ -2.68
PTPN12-210ENST00000464313 CNTLNQ9NXG0 1405 aa-1.68□□□□□ -2.68
PTPN12-210ENST00000464313 CHD7Q9P2D1 2997 aa-1.7□□□□□ -2.68
PTPN12-210ENST00000464313 APOBP04114 4563 aaKnown RBP-1.7□□□□□ -2.68
PTPN12-210ENST00000464313 C4AP0C0L4 1744 aa-1.7□□□□□ -2.68
PTPN12-210ENST00000464313 C4BP0C0L5 1744 aa-1.7□□□□□ -2.68
PTPN12-210ENST00000464313 COX6B2Q6YFQ2 88 aa-1.7□□□□□ -2.68
PTPN12-210ENST00000464313 DNAH7Q8WXX0 4024 aa-1.7□□□□□ -2.68
PTPN12-210ENST00000464313 DNAH1Q9P2D7 4330 aa-1.7□□□□□ -2.68
PTPN12-210ENST00000464313 LRRC7Q96NW7 1537 aa-1.71□□□□□ -2.68
PTPN12-210ENST00000464313 DEFA5Q01523 94 aa-1.72□□□□□ -2.68
PTPN12-210ENST00000464313 ACBD7Q8N6N7 88 aa-1.72□□□□□ -2.68
PTPN12-210ENST00000464313 GAFA1Q96PS6 74 aa-1.72□□□□□ -2.68
PTPN12-210ENST00000464313 VPS13BQ7Z7G8 4022 aa-1.72□□□□□ -2.69
PTPN12-210ENST00000464313 EYSQ5T1H1 3165 aa-1.73□□□□□ -2.69
PTPN12-210ENST00000464313 RGPD1P0DJD0 1748 aa-1.73□□□□□ -2.69
PTPN12-210ENST00000464313 IQCF6A8MYZ5 107 aa-1.73□□□□□ -2.69
PTPN12-210ENST00000464313 RPL38P63173 70 aaKnown RBP-1.73□□□□□ -2.69
PTPN12-210ENST00000464313 RGPD8O14715 1765 aaPredicted RBP-1.73□□□□□ -2.69
PTPN12-210ENST00000464313 RGPD5Q99666 1765 aa-1.73□□□□□ -2.69
PTPN12-210ENST00000464313 KALRNO60229 2985 aa-1.73□□□□□ -2.69
PTPN12-210ENST00000464313 SACSQ9NZJ4 4579 aa-1.73□□□□□ -2.69
PTPN12-210ENST00000464313 LRRC9Q6ZRR7 1453 aa-1.74□□□□□ -2.69
PTPN12-210ENST00000464313 EPRSP07814 1512 aaKnown RBP-1.74□□□□□ -2.69
PTPN12-210ENST00000464313 A0A1B0GUT8 65 aa-1.74□□□□□ -2.69
PTPN12-210ENST00000464313 ALKQ9UM73 1620 aa-1.76□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms