RNA–Protein interactions for RNA: ENST00000464088.5

CD58-204, Transcript of CD58 molecule, humanhuman

TSL 1 (best)

Gene CD58, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-204ENST00000464088 COPS9Q8WXC6 57 aa12.57□□□□□ -0.4
CD58-204ENST00000464088 KRTAP4-16G5E9R7 235 aaPredicted RBP12.55□□□□□ -0.4
CD58-204ENST00000464088 FAM19A1Q7Z5A9 133 aa12.55□□□□□ -0.4
CD58-204ENST00000464088 UBE2AP49459 152 aa12.54□□□□□ -0.4
CD58-204ENST00000464088 S100A7L2Q5SY68 101 aa12.54□□□□□ -0.4
CD58-204ENST00000464088 PRLHP81277 87 aa12.53□□□□□ -0.4
CD58-204ENST00000464088 LINC00518Q8N0U6 118 aa12.53□□□□□ -0.4
CD58-204ENST00000464088 LINC00337Q8N6G1 96 aa12.53□□□□□ -0.4
CD58-204ENST00000464088 SLC25A34Q6PIV7 304 aa12.52□□□□□ -0.41
CD58-204ENST00000464088 KRTAP1-4P0C5Y4 121 aa12.5□□□□□ -0.41
CD58-204ENST00000464088 S100A12P80511 92 aa12.5□□□□□ -0.41
CD58-204ENST00000464088 C2orf91Q6ZV80 131 aa12.5□□□□□ -0.41
CD58-204ENST00000464088 HIGD1BQ9P298 99 aa12.5□□□□□ -0.41
CD58-204ENST00000464088 TRAV23DV6A0A075B6W5 121 aa12.49□□□□□ -0.41
CD58-204ENST00000464088 KRTAP10-8P60410 259 aa12.48□□□□□ -0.41
CD58-204ENST00000464088 OR13C6PQ8NH95 151 aa12.47□□□□□ -0.41
CD58-204ENST00000464088 ETDCA0A1B0GVM5 59 aa12.46□□□□□ -0.41
CD58-204ENST00000464088 B5MCH6 92 aa12.46□□□□□ -0.41
CD58-204ENST00000464088 A4D1N5 150 aa12.45□□□□□ -0.42
CD58-204ENST00000464088 ZNF73O43830 326 aaPredicted RBP12.45□□□□□ -0.42
CD58-204ENST00000464088 HIST1H4GQ99525 98 aa12.45□□□□□ -0.42
CD58-204ENST00000464088 CBY1Q9Y3M2 126 aa12.45□□□□□ -0.42
CD58-204ENST00000464088 HIGD2AQ9BW72 106 aa12.42□□□□□ -0.42
CD58-204ENST00000464088 TRAV13-2A0A0B4J235 113 aa12.41□□□□□ -0.42
CD58-204ENST00000464088 Q6ZRX8 168 aa12.41□□□□□ -0.42
CD58-204ENST00000464088 SMCR5Q8TEV8 140 aa12.41□□□□□ -0.42
CD58-204ENST00000464088 LOC105371267A0A1B0GV96 52 aa12.4□□□□□ -0.42
CD58-204ENST00000464088 A6NDN8 102 aa12.4□□□□□ -0.42
CD58-204ENST00000464088 LPAP08519 4548 aa12.4□□□□□ -0.43
CD58-204ENST00000464088 Q9BRP9 147 aa12.39□□□□□ -0.43
CD58-204ENST00000464088 TAL2Q16559 108 aa12.38□□□□□ -0.43
CD58-204ENST00000464088 PRR26Q8N8Z3 221 aa12.38□□□□□ -0.43
CD58-204ENST00000464088 SMIM6P0DI80 62 aa12.37□□□□□ -0.43
CD58-204ENST00000464088 C6orf99Q4VX62 202 aa12.36□□□□□ -0.43
CD58-204ENST00000464088 KRTAP9-2Q9BYQ4 174 aa12.36□□□□□ -0.43
CD58-204ENST00000464088 UQCR10Q9UDW1 63 aa12.36□□□□□ -0.43
CD58-204ENST00000464088 ERC2-IT1O76042 136 aa12.35□□□□□ -0.43
CD58-204ENST00000464088 HINT1P49773 126 aaPredicted RBP12.34□□□□□ -0.43
CD58-204ENST00000464088 CEND1Q8N111 149 aa12.34□□□□□ -0.43
CD58-204ENST00000464088 SPRR4Q96PI1 79 aa12.34□□□□□ -0.43
CD58-204ENST00000464088 C12orf57Q99622 126 aa12.34□□□□□ -0.43
CD58-204ENST00000464088 ANAPC11Q9NYG5 84 aa12.34□□□□□ -0.43
CD58-204ENST00000464088 ELOF1P60002 83 aaKnown RBP12.33□□□□□ -0.44
CD58-204ENST00000464088 SMIM11BQ8TCY0 68 aa12.33□□□□□ -0.44
CD58-204ENST00000464088 A0A087X002 238 aa12.32□□□□□ -0.44
CD58-204ENST00000464088 TRBV7-6A0A0J9YX20 115 aa12.31□□□□□ -0.44
CD58-204ENST00000464088 CFC1BP0CG36 223 aa12.31□□□□□ -0.44
CD58-204ENST00000464088 CFC1P0CG37 223 aa12.31□□□□□ -0.44
CD58-204ENST00000464088 COX7BP24311 80 aa12.31□□□□□ -0.44
CD58-204ENST00000464088 FAM229BQ4G0N7 80 aa12.31□□□□□ -0.44
CD58-204ENST00000464088 HSD52Q0P140 79 aa12.3□□□□□ -0.44
CD58-204ENST00000464088 ZNF706Q9Y5V0 76 aaPredicted RBP12.3□□□□□ -0.44
CD58-204ENST00000464088 CRYGAP11844 174 aa12.29□□□□□ -0.44
CD58-204ENST00000464088 RPL13AP40429 203 aaKnown RBP12.29□□□□□ -0.44
CD58-204ENST00000464088 FXYD2P54710 66 aa12.29□□□□□ -0.44
CD58-204ENST00000464088 A0A0B4J2C4 111 aa12.28□□□□□ -0.44
CD58-204ENST00000464088 PRO1933Q9H354 126 aa12.28□□□□□ -0.44
CD58-204ENST00000464088 A0A1B0GWB2 263 aa12.27□□□□□ -0.45
CD58-204ENST00000464088 KRTAP13-2Q52LG2 175 aa12.27□□□□□ -0.45
CD58-204ENST00000464088 DHRS4-AS1Q9P1J3 65 aa12.27□□□□□ -0.45
CD58-204ENST00000464088 LINC00483Q53H64 154 aa12.26□□□□□ -0.45
CD58-204ENST00000464088 MUC2Q02817 5179 aa12.26□□□□□ -0.45
CD58-204ENST00000464088 TMEM238LA0A1B0GVL6 79 aa12.24□□□□□ -0.45
CD58-204ENST00000464088 A6NJY4 79 aa12.24□□□□□ -0.45
CD58-204ENST00000464088 ST20-AS1Q8NBB2 130 aa12.23□□□□□ -0.45
CD58-204ENST00000464088 RAB37Q96AX2 223 aa12.23□□□□□ -0.45
CD58-204ENST00000464088 GAGE2AQ6NT46 116 aa12.22□□□□□ -0.45
CD58-204ENST00000464088 TYMSOSQ8TAI1 123 aa12.2□□□□□ -0.46
CD58-204ENST00000464088 KRTAP9-6A0A140TA67 174 aa12.19□□□□□ -0.46
CD58-204ENST00000464088 C3orf22Q8N5N4 141 aa12.19□□□□□ -0.46
CD58-204ENST00000464088 H7C2G1 150 aa12.18□□□□□ -0.46
CD58-204ENST00000464088 VAMP3Q15836 100 aa12.18□□□□□ -0.46
CD58-204ENST00000464088 PRO1854Q9UHT4 67 aa12.18□□□□□ -0.46
CD58-204ENST00000464088 SPRR1BP22528 89 aa12.17□□□□□ -0.46
CD58-204ENST00000464088 NHP2Q9NX24 153 aaKnown RBP12.17□□□□□ -0.46
CD58-204ENST00000464088 BVES-AS1Q5T3Y7 98 aa12.15□□□□□ -0.46
CD58-204ENST00000464088 LINC00575Q6W349 94 aa12.15□□□□□ -0.46
CD58-204ENST00000464088 FAT4Q6V0I7 4981 aa12.15□□□□□ -0.46
CD58-204ENST00000464088 A0A0U1RQV1 116 aa12.13□□□□□ -0.47
CD58-204ENST00000464088 K7ERJ3 54 aa12.13□□□□□ -0.47
CD58-204ENST00000464088 LINC01547P58512 204 aaPredicted RBP12.12□□□□□ -0.47
CD58-204ENST00000464088 CTAG1AP78358 180 aa12.12□□□□□ -0.47
CD58-204ENST00000464088 IGLV5-48A0A075B6I7 105 aa12.1□□□□□ -0.47
CD58-204ENST00000464088 TSTD3H0UI37 97 aa12.1□□□□□ -0.47
CD58-204ENST00000464088 SLC25A20O43772 301 aa12.1□□□□□ -0.47
CD58-204ENST00000464088 Q1RN00 199 aa12.1□□□□□ -0.47
CD58-204ENST00000464088 TEX49A0A1B0GTD5 131 aa12.08□□□□□ -0.48
CD58-204ENST00000464088 hADV29S1A0JD25 119 aa12.08□□□□□ -0.48
CD58-204ENST00000464088 IGLV9-49A0A0B4J1Y8 123 aa12.07□□□□□ -0.48
CD58-204ENST00000464088 LCE2AQ5TA79 106 aaPredicted RBP12.07□□□□□ -0.48
CD58-204ENST00000464088 LINC00304Q8N9R0 145 aa12.07□□□□□ -0.48
CD58-204ENST00000464088 DEFB105AQ8NG35 78 aa12.07□□□□□ -0.48
CD58-204ENST00000464088 H0YGX0 51 aa12.06□□□□□ -0.48
CD58-204ENST00000464088 MOBPQ13875 183 aa12.06□□□□□ -0.48
CD58-204ENST00000464088 M0R143 59 aa12.05□□□□□ -0.48
CD58-204ENST00000464088 TRIAP1O43715 76 aa12.05□□□□□ -0.48
CD58-204ENST00000464088 SMIM29Q86T20 159 aa12.05□□□□□ -0.48
CD58-204ENST00000464088 TSPAN13O95857 204 aa12.04□□□□□ -0.48
CD58-204ENST00000464088 Q6ZQY7 126 aa12.04□□□□□ -0.48
CD58-204ENST00000464088 SSBP3-AS1Q7Z2R9 100 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms