RNA–Protein interactions for RNA: ENST00000463994.4

CDKL5-203, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 2,632 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-203ENST00000463994 PTPN13Q12923 2485 aa4.63□□□□□ -1.67
CDKL5-203ENST00000463994 IGHV6-1A0A0B4J1U7 121 aa4.62□□□□□ -1.67
CDKL5-203ENST00000463994 BRD3OSQ6XYD6 125 aa4.62□□□□□ -1.67
CDKL5-203ENST00000463994 IGLV5-48A0A075B6I7 105 aa4.62□□□□□ -1.67
CDKL5-203ENST00000463994 ZNF702PQ9H963 129 aa4.62□□□□□ -1.67
CDKL5-203ENST00000463994 IGKV2D-24A0A075B6R9 120 aa4.61□□□□□ -1.67
CDKL5-203ENST00000463994 DEFB131AP59861 70 aa4.61□□□□□ -1.67
CDKL5-203ENST00000463994 SEC61BP60468 96 aaKnown RBP4.61□□□□□ -1.67
CDKL5-203ENST00000463994 CR1P17927 2039 aa4.61□□□□□ -1.67
CDKL5-203ENST00000463994 KRTAP10-9P60411 292 aa4.6□□□□□ -1.67
CDKL5-203ENST00000463994 C1orf134Q5TEV5 83 aa4.6□□□□□ -1.67
CDKL5-203ENST00000463994 CSAG1Q6PB30 78 aa4.6□□□□□ -1.67
CDKL5-203ENST00000463994 REG3GQ6UW15 175 aa4.59□□□□□ -1.67
CDKL5-203ENST00000463994 Q8NBF4 154 aa4.59□□□□□ -1.67
CDKL5-203ENST00000463994 AKAP6Q13023 2319 aa4.59□□□□□ -1.68
CDKL5-203ENST00000463994 WNK1Q9H4A3 2382 aa4.59□□□□□ -1.68
CDKL5-203ENST00000463994 WFDC13Q8IUB5 93 aa4.59□□□□□ -1.68
CDKL5-203ENST00000463994 SPTA1P02549 2419 aa4.58□□□□□ -1.68
CDKL5-203ENST00000463994 DEFB116Q30KQ4 102 aa4.58□□□□□ -1.68
CDKL5-203ENST00000463994 SPRR4Q96PI1 79 aa4.58□□□□□ -1.68
CDKL5-203ENST00000463994 HIVEP3Q5T1R4 2406 aa4.58□□□□□ -1.68
CDKL5-203ENST00000463994 A0A0J9YWU9 116 aa4.58□□□□□ -1.68
CDKL5-203ENST00000463994 A0A1B0GUV1 79 aa4.58□□□□□ -1.68
CDKL5-203ENST00000463994 CCL19Q99731 98 aa4.58□□□□□ -1.68
CDKL5-203ENST00000463994 MSMBP08118 114 aa4.57□□□□□ -1.68
CDKL5-203ENST00000463994 C1orf137Q5JT78 98 aa4.57□□□□□ -1.68
CDKL5-203ENST00000463994 Q6ZR54 194 aa4.57□□□□□ -1.68
CDKL5-203ENST00000463994 WFDC10BQ8IUB3 73 aa4.57□□□□□ -1.68
CDKL5-203ENST00000463994 KRTAP1-3Q8IUG1 177 aa4.57□□□□□ -1.68
CDKL5-203ENST00000463994 BOD1L1Q8NFC6 3051 aa4.57□□□□□ -1.68
CDKL5-203ENST00000463994 USP9YO00507 2555 aaPredicted RBP4.57□□□□□ -1.68
CDKL5-203ENST00000463994 IGLV9-49A0A0B4J1Y8 123 aa4.57□□□□□ -1.68
CDKL5-203ENST00000463994 ADGRG4Q8IZF6 3080 aa4.57□□□□□ -1.68
CDKL5-203ENST00000463994 BSNQ9UPA5 3926 aa4.56□□□□□ -1.68
CDKL5-203ENST00000463994 IGLV1-50A0A075B6I6 118 aa4.56□□□□□ -1.68
CDKL5-203ENST00000463994 UNQ6190/PRO20217Q6UXQ8 127 aa4.56□□□□□ -1.68
CDKL5-203ENST00000463994 Q8N377 158 aa4.56□□□□□ -1.68
CDKL5-203ENST00000463994 DEFB105AQ8NG35 78 aa4.56□□□□□ -1.68
CDKL5-203ENST00000463994 UNC79Q9P2D8 2635 aa4.55□□□□□ -1.68
CDKL5-203ENST00000463994 CLPSL2Q6UWE3 100 aa4.55□□□□□ -1.68
CDKL5-203ENST00000463994 C2CD3Q4AC94 2353 aa4.55□□□□□ -1.68
CDKL5-203ENST00000463994 KRTAP29-1A8MX34 341 aaPredicted RBP4.55□□□□□ -1.68
CDKL5-203ENST00000463994 ROMO1P60602 79 aa4.55□□□□□ -1.68
CDKL5-203ENST00000463994 CHCHD10Q8WYQ3 142 aaPredicted RBP4.54□□□□□ -1.68
CDKL5-203ENST00000463994 HECTD1Q9ULT8 2610 aa4.54□□□□□ -1.68
CDKL5-203ENST00000463994 ABCA2Q9BZC7 2435 aa4.54□□□□□ -1.68
CDKL5-203ENST00000463994 USP9XQ93008 2570 aaPredicted RBP4.54□□□□□ -1.68
CDKL5-203ENST00000463994 CDK2AP2O75956 126 aa4.54□□□□□ -1.68
CDKL5-203ENST00000463994 C10orf99Q6UWK7 81 aa4.54□□□□□ -1.68
CDKL5-203ENST00000463994 HRNRQ86YZ3 2850 aaPredicted RBP4.54□□□□□ -1.68
CDKL5-203ENST00000463994 SETXQ7Z333 2677 aaKnown RBP4.54□□□□□ -1.68
CDKL5-203ENST00000463994 NOP10Q9NPE3 64 aaKnown RBP4.53□□□□□ -1.68
CDKL5-203ENST00000463994 FLNBO75369 2602 aaKnown RBP4.53□□□□□ -1.68
CDKL5-203ENST00000463994 DCHS2Q6V1P9 2916 aa4.53□□□□□ -1.68
CDKL5-203ENST00000463994 ASPMQ8IZT6 3477 aa4.53□□□□□ -1.68
CDKL5-203ENST00000463994 IGLV5-37A0A075B6J1 123 aa4.53□□□□□ -1.68
CDKL5-203ENST00000463994 GVQW2A0A096LPI5 108 aaPredicted RBP4.53□□□□□ -1.68
CDKL5-203ENST00000463994 SPATA8Q6RVD6 105 aa4.53□□□□□ -1.68
CDKL5-203ENST00000463994 C7orf33Q8WU49 177 aa4.53□□□□□ -1.68
CDKL5-203ENST00000463994 XAGE1AQ9HD64 81 aa4.53□□□□□ -1.68
CDKL5-203ENST00000463994 MAST4O15021 2626 aa4.52□□□□□ -1.69
CDKL5-203ENST00000463994 LRRK2Q5S007 2527 aa4.52□□□□□ -1.69
CDKL5-203ENST00000463994 HRES1P13985 223 aa4.51□□□□□ -1.69
CDKL5-203ENST00000463994 ANKRD17O75179 2603 aaKnown RBP4.51□□□□□ -1.69
CDKL5-203ENST00000463994 LRBAP50851 2863 aa4.51□□□□□ -1.69
CDKL5-203ENST00000463994 ATMQ13315 3056 aa4.51□□□□□ -1.69
CDKL5-203ENST00000463994 IGLV10-54A0A075B6I4 117 aa4.5□□□□□ -1.69
CDKL5-203ENST00000463994 SLURP1P55000 103 aa4.5□□□□□ -1.69
CDKL5-203ENST00000463994 PCOTHQ58A44 107 aa4.5□□□□□ -1.69
CDKL5-203ENST00000463994 C4orf3Q8WVX3 66 aa4.5□□□□□ -1.69
CDKL5-203ENST00000463994 Q6YL49 198 aa4.49□□□□□ -1.69
CDKL5-203ENST00000463994 DHRS4-AS1Q9P1J3 65 aa4.49□□□□□ -1.69
CDKL5-203ENST00000463994 KRTAP1-1Q07627 177 aa4.48□□□□□ -1.69
CDKL5-203ENST00000463994 C16orf74Q96GX8 76 aa4.48□□□□□ -1.69
CDKL5-203ENST00000463994 COL12A1Q99715 3063 aa4.48□□□□□ -1.69
CDKL5-203ENST00000463994 ABCA12Q86UK0 2595 aa4.48□□□□□ -1.69
CDKL5-203ENST00000463994 PDZD2O15018 2839 aa4.48□□□□□ -1.69
CDKL5-203ENST00000463994 MIR22HGQ0VDD5 57 aa4.48□□□□□ -1.69
CDKL5-203ENST00000463994 NOTCH2NLQ7Z3S9 236 aa4.48□□□□□ -1.69
CDKL5-203ENST00000463994 MYO9AB2RTY4 2548 aa4.48□□□□□ -1.69
CDKL5-203ENST00000463994 CREBBPQ92793 2442 aa4.47□□□□□ -1.69
CDKL5-203ENST00000463994 DEFB131BA0A096LNP1 70 aa4.47□□□□□ -1.69
CDKL5-203ENST00000463994 C6orf48Q9UBA6 75 aa4.47□□□□□ -1.69
CDKL5-203ENST00000463994 ANGP03950 147 aaKnown RBP4.47□□□□□ -1.69
CDKL5-203ENST00000463994 FLNCQ14315 2725 aa4.47□□□□□ -1.69
CDKL5-203ENST00000463994 NAV2Q8IVL1 2488 aa4.46□□□□□ -1.69
CDKL5-203ENST00000463994 CMC4P56277 68 aaPredicted RBP4.46□□□□□ -1.69
CDKL5-203ENST00000463994 DEFB136Q30KP8 78 aa4.46□□□□□ -1.69
CDKL5-203ENST00000463994 SPTAN1Q13813 2472 aaKnown RBP4.46□□□□□ -1.7
CDKL5-203ENST00000463994 RELNP78509 3460 aa4.46□□□□□ -1.7
CDKL5-203ENST00000463994 INAFM1C9JVW0 142 aa4.45□□□□□ -1.7
CDKL5-203ENST00000463994 A8MWP4 228 aa4.45□□□□□ -1.7
CDKL5-203ENST00000463994 RPL37AP61513 92 aaKnown RBP4.45□□□□□ -1.7
CDKL5-203ENST00000463994 UQCR11O14957 56 aa4.44□□□□□ -1.7
CDKL5-203ENST00000463994 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.44□□□□□ -1.7
CDKL5-203ENST00000463994 MAP1AP78559 2803 aaPredicted RBP4.44□□□□□ -1.7
CDKL5-203ENST00000463994 SVEP1Q4LDE5 3571 aa4.43□□□□□ -1.7
CDKL5-203ENST00000463994 A0A1B0GU69 56 aa4.43□□□□□ -1.7
CDKL5-203ENST00000463994 TP53AIP1Q9HCN2 124 aa4.43□□□□□ -1.7
CDKL5-203ENST00000463994 LAMA5O15230 3695 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms