RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 IFI27L1Q96BM0 104 aa7.68□□□□□ -1.18
SMC1A-204ENST00000463684 TRAPPC1Q9Y5R8 145 aa7.68□□□□□ -1.18
SMC1A-204ENST00000463684 TMEM218A2RU14 115 aa7.67□□□□□ -1.18
SMC1A-204ENST00000463684 NDUFC2O95298 119 aa7.67□□□□□ -1.18
SMC1A-204ENST00000463684 COMMD7Q86VX2 200 aa7.67□□□□□ -1.18
SMC1A-204ENST00000463684 SPRR1BP22528 89 aa7.66□□□□□ -1.18
SMC1A-204ENST00000463684 IFITM2Q01629 132 aa7.66□□□□□ -1.18
SMC1A-204ENST00000463684 CD164Q04900 197 aa7.66□□□□□ -1.18
SMC1A-204ENST00000463684 CBY1Q9Y3M2 126 aa7.66□□□□□ -1.18
SMC1A-204ENST00000463684 H7C2G1 150 aa7.64□□□□□ -1.19
SMC1A-204ENST00000463684 UQCC3Q6UW78 93 aa7.64□□□□□ -1.19
SMC1A-204ENST00000463684 LEPROTO15243 131 aa7.63□□□□□ -1.19
SMC1A-204ENST00000463684 SMCPP49901 116 aaPredicted RBP7.63□□□□□ -1.19
SMC1A-204ENST00000463684 Q6Q795 121 aa7.63□□□□□ -1.19
SMC1A-204ENST00000463684 PRO1933Q9H354 126 aa7.63□□□□□ -1.19
SMC1A-204ENST00000463684 DHRS4-AS1Q9P1J3 65 aa7.63□□□□□ -1.19
SMC1A-204ENST00000463684 CFC1P0CG37 223 aa7.62□□□□□ -1.19
SMC1A-204ENST00000463684 C1orf195Q5TG92 126 aa7.62□□□□□ -1.19
SMC1A-204ENST00000463684 RPS10P5Q9NQ39 176 aa7.62□□□□□ -1.19
SMC1A-204ENST00000463684 TSPEAR-AS2P59090 65 aa7.61□□□□□ -1.19
SMC1A-204ENST00000463684 CLLU1Q5K131 121 aa7.61□□□□□ -1.19
SMC1A-204ENST00000463684 Q5XG85 94 aa7.61□□□□□ -1.19
SMC1A-204ENST00000463684 TAL2Q16559 108 aa7.6□□□□□ -1.19
SMC1A-204ENST00000463684 CHCHD1Q96BP2 118 aaKnown RBP7.6□□□□□ -1.19
SMC1A-204ENST00000463684 J3QQQ9 107 aa7.59□□□□□ -1.19
SMC1A-204ENST00000463684 NMUP48645 174 aa7.59□□□□□ -1.19
SMC1A-204ENST00000463684 AKR1D1P51857 326 aa7.59□□□□□ -1.19
SMC1A-204ENST00000463684 NPC2P61916 151 aa7.59□□□□□ -1.19
SMC1A-204ENST00000463684 RHEBQ15382 184 aa7.59□□□□□ -1.19
SMC1A-204ENST00000463684 Q1RN00 199 aa7.59□□□□□ -1.19
SMC1A-204ENST00000463684 H0Y8G0 127 aa7.58□□□□□ -1.2
SMC1A-204ENST00000463684 DEFB105AQ8NG35 78 aa7.58□□□□□ -1.2
SMC1A-204ENST00000463684 OR13C6PQ8NH95 151 aa7.58□□□□□ -1.2
SMC1A-204ENST00000463684 SSPOA2VEC9 5147 aa7.58□□□□□ -1.2
SMC1A-204ENST00000463684 LGALS3P17931 250 aaKnown RBP7.57□□□□□ -1.2
SMC1A-204ENST00000463684 USH2AO75445 5202 aa7.56□□□□□ -1.2
SMC1A-204ENST00000463684 SOSTDC1Q6X4U4 206 aa7.56□□□□□ -1.2
SMC1A-204ENST00000463684 SMIM29Q86T20 159 aa7.56□□□□□ -1.2
SMC1A-204ENST00000463684 HERVK_113P61574 105 aa7.55□□□□□ -1.2
SMC1A-204ENST00000463684 TEX49A0A1B0GTD5 131 aa7.54□□□□□ -1.2
SMC1A-204ENST00000463684 EIF4EBP3O60516 100 aaPredicted RBP7.54□□□□□ -1.2
SMC1A-204ENST00000463684 PLNP26678 52 aa7.54□□□□□ -1.2
SMC1A-204ENST00000463684 HSBP1O75506 76 aa7.53□□□□□ -1.2
SMC1A-204ENST00000463684 COX7BP24311 80 aa7.53□□□□□ -1.2
SMC1A-204ENST00000463684 ADAMTSL4-AS1Q5T5F5 129 aa7.53□□□□□ -1.2
SMC1A-204ENST00000463684 ATP11AUNQ6ZP68 121 aa7.53□□□□□ -1.2
SMC1A-204ENST00000463684 TCL1BO95988 128 aa7.52□□□□□ -1.21
SMC1A-204ENST00000463684 KRTAP9-8Q9BYQ0 159 aa7.52□□□□□ -1.21
SMC1A-204ENST00000463684 A0A0J9YXY3 114 aa7.51□□□□□ -1.21
SMC1A-204ENST00000463684 ELOF1P60002 83 aaKnown RBP7.51□□□□□ -1.21
SMC1A-204ENST00000463684 SPANXCQ9NY87 97 aa7.51□□□□□ -1.21
SMC1A-204ENST00000463684 DPM2O94777 84 aa7.5□□□□□ -1.21
SMC1A-204ENST00000463684 C10orf91Q5T1B1 145 aa7.5□□□□□ -1.21
SMC1A-204ENST00000463684 A0A0G2JQZ4 141 aa7.49□□□□□ -1.21
SMC1A-204ENST00000463684 SPANXDQ9BXN6 97 aa7.49□□□□□ -1.21
SMC1A-204ENST00000463684 LEPROTL1O95214 131 aa7.48□□□□□ -1.21
SMC1A-204ENST00000463684 C6orf99Q4VX62 202 aa7.48□□□□□ -1.21
SMC1A-204ENST00000463684 FCGBPQ9Y6R7 5405 aaPredicted RBP7.47□□□□□ -1.21
SMC1A-204ENST00000463684 C20orf202A1L168 122 aa7.47□□□□□ -1.21
SMC1A-204ENST00000463684 IGKCP01834 107 aa7.47□□□□□ -1.21
SMC1A-204ENST00000463684 LINC00308Q8TCZ7 52 aa7.47□□□□□ -1.21
SMC1A-204ENST00000463684 PCP2Q8IVA1 136 aa7.46□□□□□ -1.22
SMC1A-204ENST00000463684 PMCHL2Q9BQD1 86 aa7.46□□□□□ -1.22
SMC1A-204ENST00000463684 Q75L30 129 aa7.44□□□□□ -1.22
SMC1A-204ENST00000463684 KRTAP19-1Q8IUB9 90 aa7.44□□□□□ -1.22
SMC1A-204ENST00000463684 LINC00518Q8N0U6 118 aa7.44□□□□□ -1.22
SMC1A-204ENST00000463684 IGLV5-48A0A075B6I7 105 aa7.43□□□□□ -1.22
SMC1A-204ENST00000463684 TRBV7-6A0A0J9YX20 115 aa7.43□□□□□ -1.22
SMC1A-204ENST00000463684 HSPB8Q9UJY1 196 aa7.43□□□□□ -1.22
SMC1A-204ENST00000463684 E9PLD3 99 aa7.42□□□□□ -1.22
SMC1A-204ENST00000463684 OBSCN-AS1Q96MR7 158 aa7.42□□□□□ -1.22
SMC1A-204ENST00000463684 TRBV20-1A0A075B6N2 111 aa7.41□□□□□ -1.22
SMC1A-204ENST00000463684 FABP4P15090 132 aa7.41□□□□□ -1.22
SMC1A-204ENST00000463684 LITAFQ99732 161 aa7.41□□□□□ -1.22
SMC1A-204ENST00000463684 A0A1B0GWB2 263 aa7.4□□□□□ -1.22
SMC1A-204ENST00000463684 TIMM17BO60830 172 aa7.4□□□□□ -1.22
SMC1A-204ENST00000463684 APOC3P02656 99 aa7.39□□□□□ -1.23
SMC1A-204ENST00000463684 MACF1Q9UPN3 7388 aaKnown RBP7.38□□□□□ -1.23
SMC1A-204ENST00000463684 SNAPINO95295 136 aa7.38□□□□□ -1.23
SMC1A-204ENST00000463684 F8WEM9 126 aa7.37□□□□□ -1.23
SMC1A-204ENST00000463684 SERF1AO75920 110 aa7.37□□□□□ -1.23
SMC1A-204ENST00000463684 MT2AP02795 61 aa7.37□□□□□ -1.23
SMC1A-204ENST00000463684 A6NJY4 79 aa7.36□□□□□ -1.23
SMC1A-204ENST00000463684 NHP2Q9NX24 153 aaKnown RBP7.36□□□□□ -1.23
SMC1A-204ENST00000463684 A4D1N5 150 aa7.35□□□□□ -1.23
SMC1A-204ENST00000463684 NDUFA5Q16718 116 aa7.35□□□□□ -1.23
SMC1A-204ENST00000463684 SVBPQ8N300 66 aa7.35□□□□□ -1.23
SMC1A-204ENST00000463684 Q96NJ1 140 aa7.35□□□□□ -1.23
SMC1A-204ENST00000463684 YPEL4Q96NS1 127 aa7.35□□□□□ -1.23
SMC1A-204ENST00000463684 SYNE2Q8WXH0 6885 aaKnown RBP7.34□□□□□ -1.23
SMC1A-204ENST00000463684 LINC00846Q9NV44 126 aa7.34□□□□□ -1.23
SMC1A-204ENST00000463684 A6NDN8 102 aa7.33□□□□□ -1.24
SMC1A-204ENST00000463684 LINC00310P59036 64 aa7.33□□□□□ -1.24
SMC1A-204ENST00000463684 TRBV7-7A0A0K0K1E9 115 aa7.32□□□□□ -1.24
SMC1A-204ENST00000463684 ZNF815PA8K554 130 aa7.32□□□□□ -1.24
SMC1A-204ENST00000463684 KRTAP10-10P60014 251 aa7.32□□□□□ -1.24
SMC1A-204ENST00000463684 Q6JHZ5 121 aa7.32□□□□□ -1.24
SMC1A-204ENST00000463684 TRGC2P03986 189 aa7.31□□□□□ -1.24
SMC1A-204ENST00000463684 MT1FP04733 61 aa7.3□□□□□ -1.24
SMC1A-204ENST00000463684 KRTAP9-3Q9BYQ3 159 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms