RNA–Protein interactions for RNA: ENST00000463599.5

U2AF1-205, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 338 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-205ENST00000463599 PLAC4Q8WY50 150 aa2.2□□□□□ -2.06
U2AF1-205ENST00000463599 TTTY10Q9BZA0 68 aa2.2□□□□□ -2.06
U2AF1-205ENST00000463599 MED13LQ71F56 2210 aa2.19□□□□□ -2.06
U2AF1-205ENST00000463599 ANGP03950 147 aaKnown RBP2.19□□□□□ -2.06
U2AF1-205ENST00000463599 CRIP1P50238 77 aa2.19□□□□□ -2.06
U2AF1-205ENST00000463599 Q8IZM0 81 aa2.19□□□□□ -2.06
U2AF1-205ENST00000463599 LINC01590Q5TEZ4 76 aa2.18□□□□□ -2.06
U2AF1-205ENST00000463599 C10orf99Q6UWK7 81 aa2.18□□□□□ -2.06
U2AF1-205ENST00000463599 CDKN2A-AS1Q9UH64 79 aa2.17□□□□□ -2.06
U2AF1-205ENST00000463599 SSC5DA1L4H1 1573 aa2.17□□□□□ -2.06
U2AF1-205ENST00000463599 LOC730098B7Z3J9 87 aa2.16□□□□□ -2.06
U2AF1-205ENST00000463599 GVQW2A0A096LPI5 108 aaPredicted RBP2.15□□□□□ -2.07
U2AF1-205ENST00000463599 G3V318 75 aa2.15□□□□□ -2.07
U2AF1-205ENST00000463599 SPINK13Q1W4C9 94 aa2.15□□□□□ -2.07
U2AF1-205ENST00000463599 TP53AIP1Q9HCN2 124 aa2.15□□□□□ -2.07
U2AF1-205ENST00000463599 CRIPTQ9P021 101 aa2.15□□□□□ -2.07
U2AF1-205ENST00000463599 CACNA1CQ13936 2221 aa2.15□□□□□ -2.07
U2AF1-205ENST00000463599 SORL1Q92673 2214 aa2.14□□□□□ -2.07
U2AF1-205ENST00000463599 F5P12259 2224 aa2.13□□□□□ -2.07
U2AF1-205ENST00000463599 Q6ZSA8 131 aa2.13□□□□□ -2.07
U2AF1-205ENST00000463599 A0A096LNT2 108 aa2.12□□□□□ -2.07
U2AF1-205ENST00000463599 LINC00575Q6W349 94 aa2.12□□□□□ -2.07
U2AF1-205ENST00000463599 LYNX1G3V0Z9 82 aa2.11□□□□□ -2.07
U2AF1-205ENST00000463599 H3BSH0 61 aa2.11□□□□□ -2.07
U2AF1-205ENST00000463599 LYNX1P0DP58 116 aa2.11□□□□□ -2.07
U2AF1-205ENST00000463599 PRB3Q04118 309 aaPredicted RBP2.11□□□□□ -2.07
U2AF1-205ENST00000463599 KRTAP5-7Q6L8G8 165 aa2.11□□□□□ -2.07
U2AF1-205ENST00000463599 COX6B2Q6YFQ2 88 aa2.11□□□□□ -2.07
U2AF1-205ENST00000463599 UBE2DNLQ8IWF7 75 aa2.11□□□□□ -2.07
U2AF1-205ENST00000463599 USMG5Q96IX5 58 aa2.11□□□□□ -2.07
U2AF1-205ENST00000463599 POLR2KP53803 58 aaKnown RBP2.1□□□□□ -2.07
U2AF1-205ENST00000463599 MINOS1Q5TGZ0 78 aa2.1□□□□□ -2.07
U2AF1-205ENST00000463599 C6orf48Q9UBA6 75 aa2.09□□□□□ -2.07
U2AF1-205ENST00000463599 URB1O60287 2271 aaKnown RBP2.08□□□□□ -2.08
U2AF1-205ENST00000463599 BPTFQ12830 3046 aa2.08□□□□□ -2.08
U2AF1-205ENST00000463599 K7EQZ3 153 aa2.07□□□□□ -2.08
U2AF1-205ENST00000463599 CCL22O00626 93 aa2.07□□□□□ -2.08
U2AF1-205ENST00000463599 PRO3102Q9H379 93 aa2.07□□□□□ -2.08
U2AF1-205ENST00000463599 ANKRD17O75179 2603 aaKnown RBP2.06□□□□□ -2.08
U2AF1-205ENST00000463599 TECTAO75443 2155 aa2.06□□□□□ -2.08
U2AF1-205ENST00000463599 RPL39P62891 51 aaKnown RBP2.06□□□□□ -2.08
U2AF1-205ENST00000463599 PRCDQ00LT1 54 aa2.06□□□□□ -2.08
U2AF1-205ENST00000463599 KNTC1P50748 2209 aa2.06□□□□□ -2.08
U2AF1-205ENST00000463599 MRPL34Q9BQ48 92 aaKnown RBP2.05□□□□□ -2.08
U2AF1-205ENST00000463599 ABCA1O95477 2261 aa2.05□□□□□ -2.08
U2AF1-205ENST00000463599 PIGYQ3MUY2 71 aa2.04□□□□□ -2.08
U2AF1-205ENST00000463599 RPL39LQ96EH5 51 aaKnown RBP2.04□□□□□ -2.08
U2AF1-205ENST00000463599 RPL37P61927 97 aaKnown RBP2.03□□□□□ -2.08
U2AF1-205ENST00000463599 SPINK9Q5DT21 86 aa2.03□□□□□ -2.08
U2AF1-205ENST00000463599 CADP27708 2225 aa2.02□□□□□ -2.09
U2AF1-205ENST00000463599 WFDC10BQ8IUB3 73 aa2.02□□□□□ -2.09
U2AF1-205ENST00000463599 IGLV5-48A0A075B6I7 105 aa2.01□□□□□ -2.09
U2AF1-205ENST00000463599 RPS27P42677 84 aaKnown RBP2.01□□□□□ -2.09
U2AF1-205ENST00000463599 WFDC13Q8IUB5 93 aa2.01□□□□□ -2.09
U2AF1-205ENST00000463599 PDE4DIPQ5VU43 2346 aa2□□□□□ -2.09
U2AF1-205ENST00000463599 DEFB131AP59861 70 aa1.99□□□□□ -2.09
U2AF1-205ENST00000463599 I3L2K1 104 aa1.98□□□□□ -2.09
U2AF1-205ENST00000463599 AHCTF1Q8WYP5 2266 aa1.98□□□□□ -2.09
U2AF1-205ENST00000463599 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
U2AF1-205ENST00000463599 ASXL3Q9C0F0 2248 aa1.97□□□□□ -2.09
U2AF1-205ENST00000463599 CNOT1A5YKK6 2376 aaKnown RBP1.97□□□□□ -2.09
U2AF1-205ENST00000463599 DEFB123Q8N688 67 aa1.97□□□□□ -2.09
U2AF1-205ENST00000463599 LEAP2Q969E1 77 aa1.97□□□□□ -2.09
U2AF1-205ENST00000463599 CACNA1EQ15878 2313 aa1.96□□□□□ -2.1
U2AF1-205ENST00000463599 H0YAA0 97 aa1.96□□□□□ -2.1
U2AF1-205ENST00000463599 M0QY20 66 aa1.96□□□□□ -2.1
U2AF1-205ENST00000463599 RP1L1Q8IWN7 2480 aaPredicted RBP1.95□□□□□ -2.1
U2AF1-205ENST00000463599 KAAG1Q9UBP8 84 aa1.95□□□□□ -2.1
U2AF1-205ENST00000463599 MUC6Q6W4X9 2439 aa1.95□□□□□ -2.1
U2AF1-205ENST00000463599 H3BUA1 57 aa1.94□□□□□ -2.1
U2AF1-205ENST00000463599 H1FX-AS1Q4G0G2 97 aa1.94□□□□□ -2.1
U2AF1-205ENST00000463599 DEFB106AQ8N104 65 aa1.94□□□□□ -2.1
U2AF1-205ENST00000463599 ASCC3Q8N3C0 2202 aaKnown RBP1.94□□□□□ -2.1
U2AF1-205ENST00000463599 PTPRQQ9UMZ3 2332 aa1.94□□□□□ -2.1
U2AF1-205ENST00000463599 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.92□□□□□ -2.1
U2AF1-205ENST00000463599 COX6A2Q02221 97 aa1.92□□□□□ -2.1
U2AF1-205ENST00000463599 TMEM167AQ8TBQ9 72 aa1.92□□□□□ -2.1
U2AF1-205ENST00000463599 KNL1Q8NG31 2342 aa1.91□□□□□ -2.1
U2AF1-205ENST00000463599 TOMM7Q9P0U1 55 aa1.91□□□□□ -2.1
U2AF1-205ENST00000463599 DOPEY2Q9Y3R5 2298 aa1.91□□□□□ -2.1
U2AF1-205ENST00000463599 CACNA1BQ00975 2339 aa1.9□□□□□ -2.1
U2AF1-205ENST00000463599 DEFB130BP0DP73 79 aa1.9□□□□□ -2.11
U2AF1-205ENST00000463599 DEFB130AP0DP74 79 aa1.9□□□□□ -2.11
U2AF1-205ENST00000463599 MMP24-AS1A0A0U1RRL7 71 aa1.89□□□□□ -2.11
U2AF1-205ENST00000463599 DEFB109BQ30KR1 87 aa1.89□□□□□ -2.11
U2AF1-205ENST00000463599 TRIOBPQ9H2D6 2365 aa1.89□□□□□ -2.11
U2AF1-205ENST00000463599 K7EIM0 57 aa1.88□□□□□ -2.11
U2AF1-205ENST00000463599 WT1-ASQ06250 92 aa1.88□□□□□ -2.11
U2AF1-205ENST00000463599 C10orf95Q9H7T3 257 aa1.87□□□□□ -2.11
U2AF1-205ENST00000463599 PRO0255Q9UI72 69 aa1.87□□□□□ -2.11
U2AF1-205ENST00000463599 APLNQ9ULZ1 77 aa1.87□□□□□ -2.11
U2AF1-205ENST00000463599 COL6A6A6NMZ7 2263 aa1.86□□□□□ -2.11
U2AF1-205ENST00000463599 KRTAP10-4P60372 401 aaPredicted RBP1.86□□□□□ -2.11
U2AF1-205ENST00000463599 DEFB105AQ8NG35 78 aa1.86□□□□□ -2.11
U2AF1-205ENST00000463599 FAM208BQ5VWN6 2430 aa1.84□□□□□ -2.11
U2AF1-205ENST00000463599 RPL39P5Q59GN2 51 aa1.84□□□□□ -2.11
U2AF1-205ENST00000463599 ALMS1Q8TCU4 4167 aa1.84□□□□□ -2.12
U2AF1-205ENST00000463599 WNK2Q9Y3S1 2297 aa1.84□□□□□ -2.12
U2AF1-205ENST00000463599 NAV3Q8IVL0 2385 aa1.84□□□□□ -2.12
U2AF1-205ENST00000463599 K7EIL1 84 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms