RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 RYR2Q92736 4967 aa3.29□□□□□ -1.88
SF3A3-202ENST00000460925 TRBV7-3A0A075B6L6 115 aa3.29□□□□□ -1.88
SF3A3-202ENST00000460925 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.29□□□□□ -1.88
SF3A3-202ENST00000460925 MYMXA0A1B0GTQ4 84 aa3.29□□□□□ -1.88
SF3A3-202ENST00000460925 IGKV2-29A2NJV5 120 aaPredicted RBP3.29□□□□□ -1.88
SF3A3-202ENST00000460925 SLC25A20O43772 301 aa3.29□□□□□ -1.88
SF3A3-202ENST00000460925 PSMB2P49721 201 aa3.29□□□□□ -1.88
SF3A3-202ENST00000460925 UBE2BP63146 152 aa3.29□□□□□ -1.88
SF3A3-202ENST00000460925 ESRGQ1W209 222 aa3.29□□□□□ -1.88
SF3A3-202ENST00000460925 NTM-AS1Q6ZSK4 140 aa3.29□□□□□ -1.88
SF3A3-202ENST00000460925 WFDC10BQ8IUB3 73 aa3.29□□□□□ -1.88
SF3A3-202ENST00000460925 ORMDL3Q8N138 153 aa3.29□□□□□ -1.88
SF3A3-202ENST00000460925 NKAPP1Q8N9T2 125 aa3.29□□□□□ -1.88
SF3A3-202ENST00000460925 CHCHD1Q96BP2 118 aaKnown RBP3.29□□□□□ -1.88
SF3A3-202ENST00000460925 SMIM2Q9BVW6 85 aa3.29□□□□□ -1.88
SF3A3-202ENST00000460925 ZNF706Q9Y5V0 76 aaPredicted RBP3.29□□□□□ -1.88
SF3A3-202ENST00000460925 IGLV2-18A0A075B6J9 118 aa3.28□□□□□ -1.88
SF3A3-202ENST00000460925 TRBV10-1A0A0K0K1A3 114 aa3.28□□□□□ -1.88
SF3A3-202ENST00000460925 IFI27P40305 119 aaPredicted RBP3.28□□□□□ -1.88
SF3A3-202ENST00000460925 POLR2KP53803 58 aaKnown RBP3.28□□□□□ -1.88
SF3A3-202ENST00000460925 RPL39P62891 51 aaKnown RBP3.28□□□□□ -1.88
SF3A3-202ENST00000460925 RBM3P98179 157 aaKnown RBP3.28□□□□□ -1.88
SF3A3-202ENST00000460925 C2orf66Q6UXQ4 117 aa3.28□□□□□ -1.88
SF3A3-202ENST00000460925 SMCR5Q8TEV8 140 aa3.28□□□□□ -1.88
SF3A3-202ENST00000460925 DNAH17Q9UFH2 4485 aa3.27□□□□□ -1.89
SF3A3-202ENST00000460925 TRBV6-5A0A0K0K1A5 114 aa3.27□□□□□ -1.89
SF3A3-202ENST00000460925 LEPROTL1O95214 131 aa3.27□□□□□ -1.89
SF3A3-202ENST00000460925 IGHV3-30P01768 117 aa3.27□□□□□ -1.89
SF3A3-202ENST00000460925 IGHV3-33P01772 117 aa3.27□□□□□ -1.89
SF3A3-202ENST00000460925 IGHV3-30-3P0DP02 117 aa3.27□□□□□ -1.89
SF3A3-202ENST00000460925 IGHV3-30-5P0DP03 117 aa3.27□□□□□ -1.89
SF3A3-202ENST00000460925 XCL1P47992 114 aa3.27□□□□□ -1.89
SF3A3-202ENST00000460925 UBE2D1P51668 147 aa3.27□□□□□ -1.89
SF3A3-202ENST00000460925 CXCL6P80162 114 aa3.27□□□□□ -1.89
SF3A3-202ENST00000460925 Q1T7F1 81 aa3.27□□□□□ -1.89
SF3A3-202ENST00000460925 FAM229BQ4G0N7 80 aa3.27□□□□□ -1.89
SF3A3-202ENST00000460925 HIGD2BQ4VC39 106 aa3.27□□□□□ -1.89
SF3A3-202ENST00000460925 RNASE13Q5GAN3 156 aaKnown RBP3.27□□□□□ -1.89
SF3A3-202ENST00000460925 CLPSL2Q6UWE3 100 aa3.27□□□□□ -1.89
SF3A3-202ENST00000460925 UBE2DNLQ8IWF7 75 aa3.27□□□□□ -1.89
SF3A3-202ENST00000460925 UBE2WQ96B02 151 aa3.27□□□□□ -1.89
SF3A3-202ENST00000460925 CHCHD7Q9BUK0 85 aa3.27□□□□□ -1.89
SF3A3-202ENST00000460925 FAT2Q9NYQ8 4349 aa3.26□□□□□ -1.89
SF3A3-202ENST00000460925 DNAH11Q96DT5 4516 aa3.26□□□□□ -1.89
SF3A3-202ENST00000460925 IGLV4-60A0A075B6I1 120 aa3.26□□□□□ -1.89
SF3A3-202ENST00000460925 A0A096LNJ9 63 aa3.26□□□□□ -1.89
SF3A3-202ENST00000460925 TRBV6-8A0A0A6YYG3 113 aa3.26□□□□□ -1.89
SF3A3-202ENST00000460925 H3BNG1 76 aa3.26□□□□□ -1.89
SF3A3-202ENST00000460925 C3orf84H3BNL1 204 aa3.26□□□□□ -1.89
SF3A3-202ENST00000460925 M0R2N4 97 aa3.26□□□□□ -1.89
SF3A3-202ENST00000460925 LY6G6CO95867 125 aa3.26□□□□□ -1.89
SF3A3-202ENST00000460925 FCER1GP30273 86 aa3.26□□□□□ -1.89
SF3A3-202ENST00000460925 FUSP35637 526 aaKnown RBP eCLIP3.26□□□□□ -1.89
SF3A3-202ENST00000460925 UBE2AP49459 152 aa3.26□□□□□ -1.89
SF3A3-202ENST00000460925 REG3AQ06141 175 aa3.26□□□□□ -1.89
SF3A3-202ENST00000460925 KLKP1Q107X0 134 aa3.26□□□□□ -1.89
SF3A3-202ENST00000460925 LELP1Q5T871 98 aa3.26□□□□□ -1.89
SF3A3-202ENST00000460925 IFI27L1Q96BM0 104 aa3.26□□□□□ -1.89
SF3A3-202ENST00000460925 KRTAP2-2Q9BYT5 123 aa3.26□□□□□ -1.89
SF3A3-202ENST00000460925 RYR3Q15413 4870 aa3.26□□□□□ -1.89
SF3A3-202ENST00000460925 TRBV25-1A0A075B6N4 114 aa3.25□□□□□ -1.89
SF3A3-202ENST00000460925 IGKV3OR2-268A0A0C4DH90 116 aa3.25□□□□□ -1.89
SF3A3-202ENST00000460925 TRBV10-2A0A0K0K1G8 114 aa3.25□□□□□ -1.89
SF3A3-202ENST00000460925 I3L3M4 83 aa3.25□□□□□ -1.89
SF3A3-202ENST00000460925 ZNF22P17026 224 aaPredicted RBP3.25□□□□□ -1.89
SF3A3-202ENST00000460925 PRR4Q16378 134 aa3.25□□□□□ -1.89
SF3A3-202ENST00000460925 Q1RN00 199 aa3.25□□□□□ -1.89
SF3A3-202ENST00000460925 ATP11AUNQ6ZP68 121 aa3.25□□□□□ -1.89
SF3A3-202ENST00000460925 HECTD4Q9Y4D8 3996 aa3.25□□□□□ -1.89
SF3A3-202ENST00000460925 TRAV13-2A0A0B4J235 113 aa3.24□□□□□ -1.89
SF3A3-202ENST00000460925 TEX49A0A1B0GTD5 131 aa3.24□□□□□ -1.89
SF3A3-202ENST00000460925 BCE1O60756 84 aa3.24□□□□□ -1.89
SF3A3-202ENST00000460925 CCL18P55774 89 aa3.24□□□□□ -1.89
SF3A3-202ENST00000460925 S100A7L2Q5SY68 101 aa3.24□□□□□ -1.89
SF3A3-202ENST00000460925 FAM104AQ969W3 186 aa3.24□□□□□ -1.89
SF3A3-202ENST00000460925 MRPL35Q9NZE8 188 aaKnown RBP3.24□□□□□ -1.89
SF3A3-202ENST00000460925 DNAH5Q8TE73 4624 aa3.24□□□□□ -1.89
SF3A3-202ENST00000460925 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.23□□□□□ -1.89
SF3A3-202ENST00000460925 PPP1R17O96001 155 aa3.23□□□□□ -1.89
SF3A3-202ENST00000460925 ANGP03950 147 aaKnown RBP3.23□□□□□ -1.89
SF3A3-202ENST00000460925 SOSTDC1Q6X4U4 206 aa3.23□□□□□ -1.89
SF3A3-202ENST00000460925 C20orf203Q8NBC4 194 aa3.23□□□□□ -1.89
SF3A3-202ENST00000460925 KLK12Q9UKR0 248 aa3.23□□□□□ -1.89
SF3A3-202ENST00000460925 UBE2D4Q9Y2X8 147 aa3.23□□□□□ -1.89
SF3A3-202ENST00000460925 IGLV10-54A0A075B6I4 117 aa3.22□□□□□ -1.89
SF3A3-202ENST00000460925 A0A0B4J2C4 111 aa3.22□□□□□ -1.89
SF3A3-202ENST00000460925 LINC01546A6NGU7 62 aa3.22□□□□□ -1.89
SF3A3-202ENST00000460925 LINC01549A6NIU2 74 aa3.22□□□□□ -1.89
SF3A3-202ENST00000460925 K7EMI3 77 aa3.22□□□□□ -1.89
SF3A3-202ENST00000460925 NDUFC1O43677 76 aa3.22□□□□□ -1.89
SF3A3-202ENST00000460925 SYCNQ0VAF6 134 aa3.22□□□□□ -1.89
SF3A3-202ENST00000460925 LINC01556Q5JQF7 62 aa3.22□□□□□ -1.89
SF3A3-202ENST00000460925 Q6JHZ5 121 aa3.22□□□□□ -1.89
SF3A3-202ENST00000460925 LINC00269Q8N2A0 174 aa3.22□□□□□ -1.89
SF3A3-202ENST00000460925 SND1-IT1Q9HBX3 110 aa3.22□□□□□ -1.89
SF3A3-202ENST00000460925 PKHD1P08F94 4074 aa3.21□□□□□ -1.9
SF3A3-202ENST00000460925 IGLV8-61A0A075B6I0 122 aa3.21□□□□□ -1.9
SF3A3-202ENST00000460925 IGKV2D-26A0A0A0MRZ7 120 aa3.21□□□□□ -1.9
SF3A3-202ENST00000460925 NBDYA0A0U1RRE5 68 aa3.21□□□□□ -1.9
SF3A3-202ENST00000460925 LCE6AA0A183 80 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms