RNA–Protein interactions for RNA: ENST00000460810.1

CCDC58-202, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-202ENST00000460810 ABRACLQ9P1F3 81 aa0.94□□□□□ -2.26
CCDC58-202ENST00000460810 ZNF469Q96JG9 3925 aaPredicted RBP0.94□□□□□ -2.26
CCDC58-202ENST00000460810 NRXN3Q9Y4C0 1643 aa0.93□□□□□ -2.26
CCDC58-202ENST00000460810 LY75O60449 1722 aa0.93□□□□□ -2.26
CCDC58-202ENST00000460810 NRAPQ86VF7 1730 aa0.93□□□□□ -2.26
CCDC58-202ENST00000460810 PIGYQ3MUY2 71 aa0.93□□□□□ -2.26
CCDC58-202ENST00000460810 USMG5Q96IX5 58 aa0.93□□□□□ -2.26
CCDC58-202ENST00000460810 TP53AIP1Q9HCN2 124 aa0.93□□□□□ -2.26
CCDC58-202ENST00000460810 NAV3Q8IVL0 2385 aa0.92□□□□□ -2.26
CCDC58-202ENST00000460810 ASXL3Q9C0F0 2248 aa0.92□□□□□ -2.26
CCDC58-202ENST00000460810 FAM208AQ9UK61 1670 aaKnown RBP0.92□□□□□ -2.26
CCDC58-202ENST00000460810 SPTY2D1-AS1A0A0U1RR47 76 aa0.92□□□□□ -2.26
CCDC58-202ENST00000460810 SMIM27A0A1W2PRY6 76 aa0.92□□□□□ -2.26
CCDC58-202ENST00000460810 CPSF4LA6NMK7 179 aaKnown RBP0.92□□□□□ -2.26
CCDC58-202ENST00000460810 DEFB123Q8N688 67 aa0.92□□□□□ -2.26
CCDC58-202ENST00000460810 UBL5Q9BZL1 73 aa0.92□□□□□ -2.26
CCDC58-202ENST00000460810 GOLGA4Q13439 2230 aaKnown RBP0.92□□□□□ -2.26
CCDC58-202ENST00000460810 KIF21BO75037 1637 aa0.91□□□□□ -2.26
CCDC58-202ENST00000460810 I3L2K1 104 aa0.91□□□□□ -2.26
CCDC58-202ENST00000460810 NDUFA4O00483 81 aa0.91□□□□□ -2.26
CCDC58-202ENST00000460810 COX6A2Q02221 97 aa0.91□□□□□ -2.26
CCDC58-202ENST00000460810 DDX60LQ5H9U9 1706 aaKnown RBP0.91□□□□□ -2.26
CCDC58-202ENST00000460810 URB1O60287 2271 aaKnown RBP0.91□□□□□ -2.26
CCDC58-202ENST00000460810 AHCTF1Q8WYP5 2266 aa0.91□□□□□ -2.26
CCDC58-202ENST00000460810 ABCC8Q09428 1581 aa0.91□□□□□ -2.26
CCDC58-202ENST00000460810 IGIPA6NJ69 53 aa0.9□□□□□ -2.27
CCDC58-202ENST00000460810 I3L3M4 83 aa0.9□□□□□ -2.27
CCDC58-202ENST00000460810 COX6B1P14854 86 aa0.9□□□□□ -2.27
CCDC58-202ENST00000460810 PLNP26678 52 aa0.9□□□□□ -2.27
CCDC58-202ENST00000460810 SERF2P84101 59 aa0.9□□□□□ -2.27
CCDC58-202ENST00000460810 DEFB114Q30KQ6 69 aa0.9□□□□□ -2.27
CCDC58-202ENST00000460810 CRIPTQ9P021 101 aa0.9□□□□□ -2.27
CCDC58-202ENST00000460810 FRAS1Q86XX4 4008 aa0.9□□□□□ -2.27
CCDC58-202ENST00000460810 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
CCDC58-202ENST00000460810 IQGAP1P46940 1657 aa0.89□□□□□ -2.27
CCDC58-202ENST00000460810 MROH2BQ7Z745 1585 aa0.89□□□□□ -2.27
CCDC58-202ENST00000460810 LINC01546A6NGU7 62 aa0.89□□□□□ -2.27
CCDC58-202ENST00000460810 M0R1W7 72 aa0.89□□□□□ -2.27
CCDC58-202ENST00000460810 MRPL33O75394 65 aaKnown RBP0.89□□□□□ -2.27
CCDC58-202ENST00000460810 SNRPGP62308 76 aaKnown RBP0.89□□□□□ -2.27
CCDC58-202ENST00000460810 COX6B2Q6YFQ2 88 aa0.89□□□□□ -2.27
CCDC58-202ENST00000460810 KRTAP19-3Q7Z4W3 81 aa0.89□□□□□ -2.27
CCDC58-202ENST00000460810 KCNQ1DNQ9H478 68 aa0.89□□□□□ -2.27
CCDC58-202ENST00000460810 DEPDC5O75140 1603 aa0.89□□□□□ -2.27
CCDC58-202ENST00000460810 ANK2Q01484 3957 aa0.89□□□□□ -2.27
CCDC58-202ENST00000460810 K7EQZ3 153 aa0.88□□□□□ -2.27
CCDC58-202ENST00000460810 CCL22O00626 93 aa0.88□□□□□ -2.27
CCDC58-202ENST00000460810 SPINK4O60575 86 aa0.88□□□□□ -2.27
CCDC58-202ENST00000460810 DDX60Q8IY21 1712 aaKnown RBP0.88□□□□□ -2.27
CCDC58-202ENST00000460810 ATP7AQ04656 1500 aa0.88□□□□□ -2.27
CCDC58-202ENST00000460810 Q8IZM0 81 aa0.87□□□□□ -2.27
CCDC58-202ENST00000460810 PRO0255Q9UI72 69 aa0.87□□□□□ -2.27
CCDC58-202ENST00000460810 TIMM8BQ9Y5J9 83 aaPredicted RBP0.87□□□□□ -2.27
CCDC58-202ENST00000460810 CNOT1A5YKK6 2376 aaKnown RBP0.87□□□□□ -2.27
CCDC58-202ENST00000460810 C4AP0C0L4 1744 aa0.86□□□□□ -2.27
CCDC58-202ENST00000460810 AHNAK2Q8IVF2 5795 aa0.86□□□□□ -2.27
CCDC58-202ENST00000460810 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.86□□□□□ -2.27
CCDC58-202ENST00000460810 DEFB131BA0A096LNP1 70 aa0.86□□□□□ -2.27
CCDC58-202ENST00000460810 ETDCA0A1B0GVM5 59 aa0.86□□□□□ -2.27
CCDC58-202ENST00000460810 BPTFQ12830 3046 aa0.86□□□□□ -2.27
CCDC58-202ENST00000460810 CLTCL1P53675 1640 aa0.86□□□□□ -2.27
CCDC58-202ENST00000460810 NDUFA3O95167 84 aa0.85□□□□□ -2.27
CCDC58-202ENST00000460810 CACNA1EQ15878 2313 aa0.85□□□□□ -2.27
CCDC58-202ENST00000460810 Q5VSD8 79 aa0.85□□□□□ -2.27
CCDC58-202ENST00000460810 SAMD9LQ8IVG5 1584 aa0.85□□□□□ -2.27
CCDC58-202ENST00000460810 MRPL34Q9BQ48 92 aaKnown RBP0.85□□□□□ -2.27
CCDC58-202ENST00000460810 TOGARAM1Q9Y4F4 1720 aa0.85□□□□□ -2.27
CCDC58-202ENST00000460810 FAM208BQ5VWN6 2430 aa0.84□□□□□ -2.27
CCDC58-202ENST00000460810 H0YGX0 51 aa0.84□□□□□ -2.27
CCDC58-202ENST00000460810 CRIP1P50238 77 aa0.84□□□□□ -2.27
CCDC58-202ENST00000460810 DOPEY2Q9Y3R5 2298 aa0.84□□□□□ -2.28
CCDC58-202ENST00000460810 DUOX1Q9NRD9 1551 aa0.83□□□□□ -2.28
CCDC58-202ENST00000460810 TNRC6CQ9HCJ0 1690 aaKnown RBP0.83□□□□□ -2.28
CCDC58-202ENST00000460810 FBN2P35556 2912 aa0.83□□□□□ -2.28
CCDC58-202ENST00000460810 PDE4DIPQ5VU43 2346 aa0.82□□□□□ -2.28
CCDC58-202ENST00000460810 C4BP0C0L5 1744 aa0.82□□□□□ -2.28
CCDC58-202ENST00000460810 LOC730098B7Z3J9 87 aa0.81□□□□□ -2.28
CCDC58-202ENST00000460810 LINC00158P58513 81 aa0.81□□□□□ -2.28
CCDC58-202ENST00000460810 CDKN2A-AS1Q9UH64 79 aa0.81□□□□□ -2.28
CCDC58-202ENST00000460810 LMO7Q8WWI1 1683 aa0.81□□□□□ -2.28
CCDC58-202ENST00000460810 PLCE1Q9P212 2302 aa0.81□□□□□ -2.28
CCDC58-202ENST00000460810 CACNA1HO95180 2353 aa0.81□□□□□ -2.28
CCDC58-202ENST00000460810 TTC28Q96AY4 2481 aa0.8□□□□□ -2.28
CCDC58-202ENST00000460810 KRTAP2-3P0C7H8 128 aa0.8□□□□□ -2.28
CCDC58-202ENST00000460810 KRTAP2-4Q9BYR9 128 aa0.8□□□□□ -2.28
CCDC58-202ENST00000460810 KRTAP2-1Q9BYU5 128 aa0.8□□□□□ -2.28
CCDC58-202ENST00000460810 PRO3102Q9H379 93 aa0.8□□□□□ -2.28
CCDC58-202ENST00000460810 TMEM167BQ9NRX6 74 aa0.8□□□□□ -2.28
CCDC58-202ENST00000460810 GCC2Q8IWJ2 1684 aa0.8□□□□□ -2.28
CCDC58-202ENST00000460810 PTPRQQ9UMZ3 2332 aa0.8□□□□□ -2.28
CCDC58-202ENST00000460810 PIEZO2Q9H5I5 2752 aa0.79□□□□□ -2.28
CCDC58-202ENST00000460810 TFF3Q07654 80 aa0.79□□□□□ -2.28
CCDC58-202ENST00000460810 LINC00308Q8TCZ7 52 aa0.79□□□□□ -2.28
CCDC58-202ENST00000460810 POLQO75417 2590 aa0.79□□□□□ -2.28
CCDC58-202ENST00000460810 PTPRZ1P23471 2315 aaPredicted RBP0.78□□□□□ -2.28
CCDC58-202ENST00000460810 KNL1Q8NG31 2342 aa0.78□□□□□ -2.28
CCDC58-202ENST00000460810 APCP25054 2843 aa0.78□□□□□ -2.28
CCDC58-202ENST00000460810 LYNX1G3V0Z9 82 aa0.78□□□□□ -2.28
CCDC58-202ENST00000460810 SPRR1AP35321 89 aa0.78□□□□□ -2.28
CCDC58-202ENST00000460810 NOTCH1P46531 2555 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms