RNA–Protein interactions for RNA: ENST00000456224.7

SCN11A-203, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-203ENST00000456224 CASC10Q5T4H9 136 aa3.15□□□□□ -1.9
SCN11A-203ENST00000456224 A6NED7 52 aa3.15□□□□□ -1.9
SCN11A-203ENST00000456224 MKI67P46013 3256 aaKnown RBP3.15□□□□□ -1.9
SCN11A-203ENST00000456224 H7BZZ5 65 aa3.15□□□□□ -1.91
SCN11A-203ENST00000456224 CAMK2N1Q7Z7J9 78 aa3.15□□□□□ -1.91
SCN11A-203ENST00000456224 C8orf17Q9NRJ1 99 aa3.15□□□□□ -1.91
SCN11A-203ENST00000456224 SPRR1BP22528 89 aa3.15□□□□□ -1.91
SCN11A-203ENST00000456224 SPACA4Q8TDM5 124 aa3.14□□□□□ -1.91
SCN11A-203ENST00000456224 IGLV7-43P04211 117 aa3.14□□□□□ -1.91
SCN11A-203ENST00000456224 KRTAP19-4Q3LI73 84 aa3.14□□□□□ -1.91
SCN11A-203ENST00000456224 Q8NDZ9 215 aa3.14□□□□□ -1.91
SCN11A-203ENST00000456224 WDR87Q6ZQQ6 2873 aa3.14□□□□□ -1.91
SCN11A-203ENST00000456224 SPAG11AQ6PDA7 123 aa3.14□□□□□ -1.91
SCN11A-203ENST00000456224 NAV2Q8IVL1 2488 aa3.14□□□□□ -1.91
SCN11A-203ENST00000456224 PRR4Q16378 134 aa3.14□□□□□ -1.91
SCN11A-203ENST00000456224 PCOTHQ58A44 107 aa3.14□□□□□ -1.91
SCN11A-203ENST00000456224 OCR1Q9BZK8 76 aa3.13□□□□□ -1.91
SCN11A-203ENST00000456224 Q75L30 129 aa3.13□□□□□ -1.91
SCN11A-203ENST00000456224 ANKRD17O75179 2603 aaKnown RBP3.13□□□□□ -1.91
SCN11A-203ENST00000456224 LAMA3Q16787 3333 aa3.13□□□□□ -1.91
SCN11A-203ENST00000456224 UNC80Q8N2C7 3258 aa3.13□□□□□ -1.91
SCN11A-203ENST00000456224 ANKRD11Q6UB99 2663 aaPredicted RBP3.13□□□□□ -1.91
SCN11A-203ENST00000456224 CYP4F30PQ9H0H9 118 aa3.13□□□□□ -1.91
SCN11A-203ENST00000456224 TYMSOSQ8TAI1 123 aa3.12□□□□□ -1.91
SCN11A-203ENST00000456224 PLAC8Q9NZF1 115 aa3.12□□□□□ -1.91
SCN11A-203ENST00000456224 FAM208BQ5VWN6 2430 aa3.12□□□□□ -1.91
SCN11A-203ENST00000456224 TNRC18O15417 2968 aaPredicted RBP3.12□□□□□ -1.91
SCN11A-203ENST00000456224 IGKV2D-30A0A075B6S6 120 aa3.12□□□□□ -1.91
SCN11A-203ENST00000456224 SPTAN1Q13813 2472 aaKnown RBP3.12□□□□□ -1.91
SCN11A-203ENST00000456224 PSORS1C2Q9UIG4 136 aa3.11□□□□□ -1.91
SCN11A-203ENST00000456224 FAM229BQ4G0N7 80 aa3.11□□□□□ -1.91
SCN11A-203ENST00000456224 LCA10Q71F78 164 aa3.11□□□□□ -1.91
SCN11A-203ENST00000456224 NBASA2RRP1 2371 aa3.11□□□□□ -1.91
SCN11A-203ENST00000456224 DNAH14Q0VDD8 3507 aa3.11□□□□□ -1.91
SCN11A-203ENST00000456224 DSCR10P59022 87 aa3.11□□□□□ -1.91
SCN11A-203ENST00000456224 C7orf65Q6ZTY9 151 aa3.11□□□□□ -1.91
SCN11A-203ENST00000456224 KTN1-AS1Q86SY8 53 aa3.11□□□□□ -1.91
SCN11A-203ENST00000456224 LINC00483Q53H64 154 aa3.1□□□□□ -1.91
SCN11A-203ENST00000456224 KRTAP4-16G5E9R7 235 aaPredicted RBP3.1□□□□□ -1.91
SCN11A-203ENST00000456224 RETNLBQ9BQ08 111 aa3.1□□□□□ -1.91
SCN11A-203ENST00000456224 CSPG4Q6UVK1 2322 aa3.1□□□□□ -1.91
SCN11A-203ENST00000456224 NCOR2Q9Y618 2525 aa3.09□□□□□ -1.91
SCN11A-203ENST00000456224 COA5Q86WW8 74 aa3.09□□□□□ -1.91
SCN11A-203ENST00000456224 PSPHP1O15172 72 aa3.09□□□□□ -1.91
SCN11A-203ENST00000456224 CREBBPQ92793 2442 aa3.09□□□□□ -1.91
SCN11A-203ENST00000456224 ZFHX3Q15911 3703 aa3.09□□□□□ -1.92
SCN11A-203ENST00000456224 CDH23Q9H251 3354 aa3.08□□□□□ -1.92
SCN11A-203ENST00000456224 SORL1Q92673 2214 aa3.08□□□□□ -1.92
SCN11A-203ENST00000456224 SPINK1P00995 79 aa3.08□□□□□ -1.92
SCN11A-203ENST00000456224 Q1T7F1 81 aa3.08□□□□□ -1.92
SCN11A-203ENST00000456224 PKD1L2Q7Z442 2459 aa3.08□□□□□ -1.92
SCN11A-203ENST00000456224 A0A1B0GU69 56 aa3.07□□□□□ -1.92
SCN11A-203ENST00000456224 LCE2DQ5TA82 110 aaPredicted RBP3.07□□□□□ -1.92
SCN11A-203ENST00000456224 LINC00304Q8N9R0 145 aa3.07□□□□□ -1.92
SCN11A-203ENST00000456224 A0A0C4DFX4 3053 aa3.07□□□□□ -1.92
SCN11A-203ENST00000456224 RANBP2P49792 3224 aaKnown RBP3.07□□□□□ -1.92
SCN11A-203ENST00000456224 MYO15AQ9UKN7 3530 aa3.07□□□□□ -1.92
SCN11A-203ENST00000456224 ACACBO00763 2458 aa3.07□□□□□ -1.92
SCN11A-203ENST00000456224 Q96NJ1 140 aa3.06□□□□□ -1.92
SCN11A-203ENST00000456224 RBM12B-AS1Q9P1G2 102 aa3.06□□□□□ -1.92
SCN11A-203ENST00000456224 WNK1Q9H4A3 2382 aa3.06□□□□□ -1.92
SCN11A-203ENST00000456224 ZNF462Q96JM2 2506 aa3.06□□□□□ -1.92
SCN11A-203ENST00000456224 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.06□□□□□ -1.92
SCN11A-203ENST00000456224 LINC00472Q9H8W2 130 aa3.06□□□□□ -1.92
SCN11A-203ENST00000456224 MMP24-AS1A0A0U1RRL7 71 aa3.05□□□□□ -1.92
SCN11A-203ENST00000456224 ZNF292O60281 2723 aa3.05□□□□□ -1.92
SCN11A-203ENST00000456224 KRTAP1-5Q9BYS1 174 aa3.04□□□□□ -1.92
SCN11A-203ENST00000456224 CEP295Q9C0D2 2601 aa3.04□□□□□ -1.92
SCN11A-203ENST00000456224 A0A0G2JQZ4 141 aa3.03□□□□□ -1.92
SCN11A-203ENST00000456224 REV3LO60673 3130 aa3.03□□□□□ -1.92
SCN11A-203ENST00000456224 A8MUN3 132 aa3.03□□□□□ -1.92
SCN11A-203ENST00000456224 AKAP13Q12802 2813 aa3.03□□□□□ -1.92
SCN11A-203ENST00000456224 SPG11Q96JI7 2443 aa3.02□□□□□ -1.93
SCN11A-203ENST00000456224 PIEZO1Q92508 2521 aa3.02□□□□□ -1.93
SCN11A-203ENST00000456224 Q6ZR54 194 aa3.02□□□□□ -1.93
SCN11A-203ENST00000456224 COL6A3P12111 3177 aa3.02□□□□□ -1.93
SCN11A-203ENST00000456224 DMDP11532 3685 aa3.02□□□□□ -1.93
SCN11A-203ENST00000456224 ATP11AUNQ6ZP68 121 aa3.02□□□□□ -1.93
SCN11A-203ENST00000456224 ASB16-AS1Q495Z4 193 aa3.01□□□□□ -1.93
SCN11A-203ENST00000456224 Q5XG85 94 aa3.01□□□□□ -1.93
SCN11A-203ENST00000456224 LCE6AA0A183 80 aa3.01□□□□□ -1.93
SCN11A-203ENST00000456224 Q6ZRN7 208 aaPredicted RBP3□□□□□ -1.93
SCN11A-203ENST00000456224 PRAC1Q96KF2 57 aa3□□□□□ -1.93
SCN11A-203ENST00000456224 ANAPC11Q9NYG5 84 aa3□□□□□ -1.93
SCN11A-203ENST00000456224 CDC42SE1Q9NRR8 79 aa2.99□□□□□ -1.93
SCN11A-203ENST00000456224 KRTAP29-1A8MX34 341 aaPredicted RBP2.99□□□□□ -1.93
SCN11A-203ENST00000456224 UQCR11O14957 56 aa2.99□□□□□ -1.93
SCN11A-203ENST00000456224 RPS29P62273 56 aaKnown RBP2.99□□□□□ -1.93
SCN11A-203ENST00000456224 SPINT4Q6UDR6 99 aa2.99□□□□□ -1.93
SCN11A-203ENST00000456224 CYSTM1Q9H1C7 97 aa2.99□□□□□ -1.93
SCN11A-203ENST00000456224 LAMA2P24043 3122 aaKnown RBP2.99□□□□□ -1.93
SCN11A-203ENST00000456224 CACNA1AO00555 2505 aa2.99□□□□□ -1.93
SCN11A-203ENST00000456224 KRTAP13-1Q8IUC0 172 aa2.99□□□□□ -1.93
SCN11A-203ENST00000456224 KRTAP7-1Q8IUC3 87 aa2.98□□□□□ -1.93
SCN11A-203ENST00000456224 KRTAP21-3Q3LHN1 58 aa2.98□□□□□ -1.93
SCN11A-203ENST00000456224 LINC01558Q9Y6Z2 57 aa2.98□□□□□ -1.93
SCN11A-203ENST00000456224 SPEGQ15772 3267 aa2.98□□□□□ -1.93
SCN11A-203ENST00000456224 ZCCHC13Q8WW36 166 aaKnown RBP2.98□□□□□ -1.93
SCN11A-203ENST00000456224 LINC01554Q52M75 96 aa2.97□□□□□ -1.93
SCN11A-203ENST00000456224 SPENQ96T58 3664 aaKnown RBP2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 1272.3 ms