RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 G3V318 75 aa1.34□□□□□ -2.19
HMGB1P26-201ENST00000452520 SMIM4Q8WVI0 70 aa1.34□□□□□ -2.19
HMGB1P26-201ENST00000452520 VAMP8Q9BV40 100 aa1.34□□□□□ -2.19
HMGB1P26-201ENST00000452520 MYH4Q9Y623 1939 aa1.34□□□□□ -2.2
HMGB1P26-201ENST00000452520 SPENQ96T58 3664 aaKnown RBP1.34□□□□□ -2.2
HMGB1P26-201ENST00000452520 PDCD11Q14690 1871 aaKnown RBP1.33□□□□□ -2.2
HMGB1P26-201ENST00000452520 SPTBN1Q01082 2364 aaKnown RBP1.33□□□□□ -2.2
HMGB1P26-201ENST00000452520 SPG11Q96JI7 2443 aa1.33□□□□□ -2.2
HMGB1P26-201ENST00000452520 C10orf142B7Z368 130 aa1.33□□□□□ -2.2
HMGB1P26-201ENST00000452520 UQCR11O14957 56 aa1.33□□□□□ -2.2
HMGB1P26-201ENST00000452520 SFT2D2O95562 160 aa1.33□□□□□ -2.2
HMGB1P26-201ENST00000452520 COX6CP09669 75 aa1.33□□□□□ -2.2
HMGB1P26-201ENST00000452520 TRAPPC2P0DI81 140 aa1.33□□□□□ -2.2
HMGB1P26-201ENST00000452520 TRAPPC2BP0DI82 140 aa1.33□□□□□ -2.2
HMGB1P26-201ENST00000452520 NPVFQ9HCQ7 196 aa1.33□□□□□ -2.2
HMGB1P26-201ENST00000452520 ARL2-SNX15V9GYD0 113 aa1.33□□□□□ -2.2
HMGB1P26-201ENST00000452520 TENM1Q9UKZ4 2725 aa1.33□□□□□ -2.2
HMGB1P26-201ENST00000452520 CSMD2Q7Z408 3487 aa1.33□□□□□ -2.2
HMGB1P26-201ENST00000452520 HIVEP1P15822 2718 aa1.32□□□□□ -2.2
HMGB1P26-201ENST00000452520 TSC2P49815 1807 aa1.32□□□□□ -2.2
HMGB1P26-201ENST00000452520 DEFB133Q30KQ1 61 aa1.32□□□□□ -2.2
HMGB1P26-201ENST00000452520 NXT2Q9NPJ8 142 aaKnown RBP1.32□□□□□ -2.2
HMGB1P26-201ENST00000452520 USP9YO00507 2555 aaPredicted RBP1.32□□□□□ -2.2
HMGB1P26-201ENST00000452520 OTOGQ6ZRI0 2925 aa1.32□□□□□ -2.2
HMGB1P26-201ENST00000452520 CENPEQ02224 2701 aa1.31□□□□□ -2.2
HMGB1P26-201ENST00000452520 MYO7BQ6PIF6 2116 aa1.31□□□□□ -2.2
HMGB1P26-201ENST00000452520 MTORP42345 2549 aa1.31□□□□□ -2.2
HMGB1P26-201ENST00000452520 NBEAL1Q6ZS30 2694 aa1.31□□□□□ -2.2
HMGB1P26-201ENST00000452520 PROK2Q9HC23 129 aa1.31□□□□□ -2.2
HMGB1P26-201ENST00000452520 NF1P21359 2839 aa1.31□□□□□ -2.2
HMGB1P26-201ENST00000452520 TLN1Q9Y490 2541 aaKnown RBP1.31□□□□□ -2.2
HMGB1P26-201ENST00000452520 FLNCQ14315 2725 aa1.31□□□□□ -2.2
HMGB1P26-201ENST00000452520 CSPG4Q6UVK1 2322 aa1.31□□□□□ -2.2
HMGB1P26-201ENST00000452520 APOC3P02656 99 aa1.3□□□□□ -2.2
HMGB1P26-201ENST00000452520 IGLC1P0CG04 106 aa1.3□□□□□ -2.2
HMGB1P26-201ENST00000452520 APCP25054 2843 aa1.3□□□□□ -2.2
HMGB1P26-201ENST00000452520 TACC2O95359 2948 aa1.3□□□□□ -2.2
HMGB1P26-201ENST00000452520 CSMD1Q96PZ7 3565 aa1.3□□□□□ -2.2
HMGB1P26-201ENST00000452520 ANKHD1Q8IWZ3 2542 aaKnown RBP1.3□□□□□ -2.2
HMGB1P26-201ENST00000452520 ATRQ13535 2644 aa1.3□□□□□ -2.2
HMGB1P26-201ENST00000452520 PKDREJQ9NTG1 2253 aa1.29□□□□□ -2.2
HMGB1P26-201ENST00000452520 ATOX1O00244 68 aa1.29□□□□□ -2.2
HMGB1P26-201ENST00000452520 NDUFC1O43677 76 aa1.29□□□□□ -2.2
HMGB1P26-201ENST00000452520 HMGA1P17096 107 aaKnown RBP1.29□□□□□ -2.2
HMGB1P26-201ENST00000452520 GNG2P59768 71 aa1.29□□□□□ -2.2
HMGB1P26-201ENST00000452520 FAM223AQ8IWN6 122 aa1.29□□□□□ -2.2
HMGB1P26-201ENST00000452520 FAM103A1Q9BTL3 118 aaKnown RBP1.29□□□□□ -2.2
HMGB1P26-201ENST00000452520 Q9H521 79 aa1.29□□□□□ -2.2
HMGB1P26-201ENST00000452520 LINC00472Q9H8W2 130 aa1.29□□□□□ -2.2
HMGB1P26-201ENST00000452520 FAIMQ9NVQ4 179 aa1.29□□□□□ -2.2
HMGB1P26-201ENST00000452520 BSNQ9UPA5 3926 aa1.29□□□□□ -2.2
HMGB1P26-201ENST00000452520 PLIN4Q96Q06 1357 aa1.29□□□□□ -2.2
HMGB1P26-201ENST00000452520 JMJD1CQ15652 2540 aa1.29□□□□□ -2.2
HMGB1P26-201ENST00000452520 TCHHQ07283 1943 aa1.28□□□□□ -2.2
HMGB1P26-201ENST00000452520 HIVEP3Q5T1R4 2406 aa1.28□□□□□ -2.2
HMGB1P26-201ENST00000452520 CCDC168Q8NDH2 2452 aa1.28□□□□□ -2.2
HMGB1P26-201ENST00000452520 MAP1AP78559 2803 aaPredicted RBP1.28□□□□□ -2.2
HMGB1P26-201ENST00000452520 A0A0D9SFI3 127 aa1.28□□□□□ -2.2
HMGB1P26-201ENST00000452520 A0A0G2JND7 137 aa1.28□□□□□ -2.2
HMGB1P26-201ENST00000452520 FDCSPQ8NFU4 85 aa1.28□□□□□ -2.2
HMGB1P26-201ENST00000452520 CACFD1Q9UGQ2 172 aa1.28□□□□□ -2.2
HMGB1P26-201ENST00000452520 U3KQA8 63 aa1.28□□□□□ -2.2
HMGB1P26-201ENST00000452520 DCHS2Q6V1P9 2916 aa1.28□□□□□ -2.2
HMGB1P26-201ENST00000452520 ANK3Q12955 4377 aaKnown RBP1.28□□□□□ -2.21
HMGB1P26-201ENST00000452520 FCGBPQ9Y6R7 5405 aaPredicted RBP1.28□□□□□ -2.21
HMGB1P26-201ENST00000452520 RYR3Q15413 4870 aa1.27□□□□□ -2.21
HMGB1P26-201ENST00000452520 ACANP16112 2415 aa1.27□□□□□ -2.21
HMGB1P26-201ENST00000452520 M0R3E3 92 aa1.27□□□□□ -2.21
HMGB1P26-201ENST00000452520 NMBP08949 121 aa1.27□□□□□ -2.21
HMGB1P26-201ENST00000452520 FAUP35544 74 aaKnown RBP1.27□□□□□ -2.21
HMGB1P26-201ENST00000452520 COX17Q14061 63 aa1.27□□□□□ -2.21
HMGB1P26-201ENST00000452520 SERP2Q8N6R1 65 aa1.27□□□□□ -2.21
HMGB1P26-201ENST00000452520 C10orf95Q9H7T3 257 aa1.27□□□□□ -2.21
HMGB1P26-201ENST00000452520 PKD1L1Q8TDX9 2849 aa1.27□□□□□ -2.21
HMGB1P26-201ENST00000452520 CADP27708 2225 aa1.27□□□□□ -2.21
HMGB1P26-201ENST00000452520 BIRC6Q9NR09 4857 aa1.27□□□□□ -2.21
HMGB1P26-201ENST00000452520 NBEAL2Q6ZNJ1 2754 aa1.26□□□□□ -2.21
HMGB1P26-201ENST00000452520 PIN1P1O15428 100 aa1.26□□□□□ -2.21
HMGB1P26-201ENST00000452520 UQCRHP07919 91 aa1.26□□□□□ -2.21
HMGB1P26-201ENST00000452520 PRB3Q04118 309 aaPredicted RBP1.26□□□□□ -2.21
HMGB1P26-201ENST00000452520 STAB1Q9NY15 2570 aa1.26□□□□□ -2.21
HMGB1P26-201ENST00000452520 AKAP6Q13023 2319 aa1.26□□□□□ -2.21
HMGB1P26-201ENST00000452520 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.26□□□□□ -2.21
HMGB1P26-201ENST00000452520 PRRC2CQ9Y520 2896 aaKnown RBP1.26□□□□□ -2.21
HMGB1P26-201ENST00000452520 COL6A5A8TX70 2615 aa1.25□□□□□ -2.21
HMGB1P26-201ENST00000452520 FLNAP21333 2647 aaKnown RBP1.25□□□□□ -2.21
HMGB1P26-201ENST00000452520 NOTCH1P46531 2555 aa1.25□□□□□ -2.21
HMGB1P26-201ENST00000452520 MGPP08493 103 aa1.25□□□□□ -2.21
HMGB1P26-201ENST00000452520 TRGV9Q99603 122 aa1.25□□□□□ -2.21
HMGB1P26-201ENST00000452520 V9GYS6 101 aa1.25□□□□□ -2.21
HMGB1P26-201ENST00000452520 TGP01266 2768 aa1.25□□□□□ -2.21
HMGB1P26-201ENST00000452520 TLN2Q9Y4G6 2542 aa1.24□□□□□ -2.21
HMGB1P26-201ENST00000452520 SPTY2D1-AS1A0A0U1RR47 76 aa1.24□□□□□ -2.21
HMGB1P26-201ENST00000452520 FAM223BA6NKX1 122 aa1.24□□□□□ -2.21
HMGB1P26-201ENST00000452520 H7BZZ5 65 aa1.24□□□□□ -2.21
HMGB1P26-201ENST00000452520 ASIPP42127 132 aa1.24□□□□□ -2.21
HMGB1P26-201ENST00000452520 UBE2DNLQ8IWF7 75 aa1.24□□□□□ -2.21
HMGB1P26-201ENST00000452520 RYR1P21817 5038 aa1.24□□□□□ -2.21
HMGB1P26-201ENST00000452520 SONP18583 2426 aaKnown RBP1.24□□□□□ -2.21
HMGB1P26-201ENST00000452520 TRBV7-7A0A0K0K1E9 115 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms