RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 RPL37AP61513 92 aaKnown RBP8.1□□□□□ -1.11
VPS33A-202ENST00000451053 TRBV10-3A0A0K0K1G6 114 aa8.09□□□□□ -1.11
VPS33A-202ENST00000451053 LINC00167Q96N53 147 aa8.09□□□□□ -1.11
VPS33A-202ENST00000451053 KRTAP3-3Q9BYR6 98 aa8.09□□□□□ -1.11
VPS33A-202ENST00000451053 KRTAP3-2Q9BYR7 98 aa8.09□□□□□ -1.11
VPS33A-202ENST00000451053 TRAV23DV6A0A075B6W5 121 aa8.08□□□□□ -1.12
VPS33A-202ENST00000451053 GAGE10A6NGK3 116 aa8.08□□□□□ -1.12
VPS33A-202ENST00000451053 TSPAN13O95857 204 aa8.08□□□□□ -1.12
VPS33A-202ENST00000451053 PLA2G1BP04054 148 aaKnown RBP8.08□□□□□ -1.12
VPS33A-202ENST00000451053 UBE2BP63146 152 aa8.08□□□□□ -1.12
VPS33A-202ENST00000451053 IGLV1-50A0A075B6I6 118 aa8.07□□□□□ -1.12
VPS33A-202ENST00000451053 C9orf118A6NHY6 69 aa8.07□□□□□ -1.12
VPS33A-202ENST00000451053 PRYO14603 147 aa8.07□□□□□ -1.12
VPS33A-202ENST00000451053 TAX1BP3O14907 124 aa8.07□□□□□ -1.12
VPS33A-202ENST00000451053 RPL28P46779 137 aaKnown RBP8.07□□□□□ -1.12
VPS33A-202ENST00000451053 PSMB2P49721 201 aa8.07□□□□□ -1.12
VPS33A-202ENST00000451053 RPL37AP8A6NKH3 93 aa8.06□□□□□ -1.12
VPS33A-202ENST00000451053 COX6CP09669 75 aa8.06□□□□□ -1.12
VPS33A-202ENST00000451053 LYRM7Q5U5X0 104 aa8.06□□□□□ -1.12
VPS33A-202ENST00000451053 SMIM11BQ8TCY0 68 aa8.06□□□□□ -1.12
VPS33A-202ENST00000451053 KCNQ1DNQ9H478 68 aa8.06□□□□□ -1.12
VPS33A-202ENST00000451053 PSORS1C2Q9UIG4 136 aa8.06□□□□□ -1.12
VPS33A-202ENST00000451053 VAMP3Q15836 100 aa8.05□□□□□ -1.12
VPS33A-202ENST00000451053 DIRC1Q969H9 104 aa8.05□□□□□ -1.12
VPS33A-202ENST00000451053 FAT1Q14517 4588 aa8.04□□□□□ -1.12
VPS33A-202ENST00000451053 H3BUT2 72 aa8.04□□□□□ -1.12
VPS33A-202ENST00000451053 ZNF73O43830 326 aaPredicted RBP8.04□□□□□ -1.12
VPS33A-202ENST00000451053 TRBV7-6A0A0J9YX20 115 aa8.03□□□□□ -1.12
VPS33A-202ENST00000451053 C6orf99Q4VX62 202 aa8.03□□□□□ -1.12
VPS33A-202ENST00000451053 C1orf137Q5JT78 98 aa8.03□□□□□ -1.12
VPS33A-202ENST00000451053 VPS13BQ7Z7G8 4022 aa8.03□□□□□ -1.12
VPS33A-202ENST00000451053 H0YGX0 51 aa8.02□□□□□ -1.13
VPS33A-202ENST00000451053 TRIAP1O43715 76 aa8.02□□□□□ -1.13
VPS33A-202ENST00000451053 SCGB1C2P0DMR2 95 aa8.02□□□□□ -1.13
VPS33A-202ENST00000451053 REG3GQ6UW15 175 aa8.02□□□□□ -1.13
VPS33A-202ENST00000451053 ABCA13Q86UQ4 5058 aa8.02□□□□□ -1.13
VPS33A-202ENST00000451053 FABP2P12104 132 aa8.01□□□□□ -1.13
VPS33A-202ENST00000451053 ETDCA0A1B0GVM5 59 aa8□□□□□ -1.13
VPS33A-202ENST00000451053 A0A1W2PPM0 123 aa8□□□□□ -1.13
VPS33A-202ENST00000451053 SPRR1AP35321 89 aa8□□□□□ -1.13
VPS33A-202ENST00000451053 NAA38Q9BRA0 125 aaKnown RBP8□□□□□ -1.13
VPS33A-202ENST00000451053 SNCGO76070 127 aa7.99□□□□□ -1.13
VPS33A-202ENST00000451053 COX7BP24311 80 aa7.99□□□□□ -1.13
VPS33A-202ENST00000451053 IGLV7-43P04211 117 aa7.98□□□□□ -1.13
VPS33A-202ENST00000451053 INAFM2P0DMQ5 153 aa7.98□□□□□ -1.13
VPS33A-202ENST00000451053 TRBV20-1A0A075B6N2 111 aa7.97□□□□□ -1.13
VPS33A-202ENST00000451053 BCE1O60756 84 aa7.97□□□□□ -1.13
VPS33A-202ENST00000451053 ELOF1P60002 83 aaKnown RBP7.97□□□□□ -1.13
VPS33A-202ENST00000451053 KRTAP4-16G5E9R7 235 aaPredicted RBP7.96□□□□□ -1.14
VPS33A-202ENST00000451053 SLC25A20O43772 301 aa7.96□□□□□ -1.14
VPS33A-202ENST00000451053 Q6ZRX8 168 aa7.96□□□□□ -1.14
VPS33A-202ENST00000451053 FAM19A1Q7Z5A9 133 aa7.96□□□□□ -1.14
VPS33A-202ENST00000451053 A0A1B0GX51 115 aa7.95□□□□□ -1.14
VPS33A-202ENST00000451053 B5MCH6 92 aa7.95□□□□□ -1.14
VPS33A-202ENST00000451053 H0Y9J4 135 aa7.95□□□□□ -1.14
VPS33A-202ENST00000451053 SPCS1Q9Y6A9 102 aa7.95□□□□□ -1.14
VPS33A-202ENST00000451053 PCLOQ9Y6V0 5065 aa7.95□□□□□ -1.14
VPS33A-202ENST00000451053 UBE2AP49459 152 aa7.94□□□□□ -1.14
VPS33A-202ENST00000451053 ATXN8Q156A1 80 aa7.94□□□□□ -1.14
VPS33A-202ENST00000451053 DHRS4-AS1Q9P1J3 65 aa7.94□□□□□ -1.14
VPS33A-202ENST00000451053 LINC00575Q6W349 94 aa7.93□□□□□ -1.14
VPS33A-202ENST00000451053 GTF2H5Q6ZYL4 71 aa7.93□□□□□ -1.14
VPS33A-202ENST00000451053 CLEC2BQ92478 149 aa7.93□□□□□ -1.14
VPS33A-202ENST00000451053 PKHD1L1Q86WI1 4243 aa7.92□□□□□ -1.14
VPS33A-202ENST00000451053 LST1O00453 97 aa7.92□□□□□ -1.14
VPS33A-202ENST00000451053 TCL1BO95988 128 aa7.92□□□□□ -1.14
VPS33A-202ENST00000451053 DNAL4O96015 105 aa7.92□□□□□ -1.14
VPS33A-202ENST00000451053 PRLHP81277 87 aa7.92□□□□□ -1.14
VPS33A-202ENST00000451053 SPINK6Q6UWN8 80 aa7.92□□□□□ -1.14
VPS33A-202ENST00000451053 KRTAP13-1Q8IUC0 172 aa7.92□□□□□ -1.14
VPS33A-202ENST00000451053 SRRM2Q9UQ35 2752 aaKnown RBP7.92□□□□□ -1.14
VPS33A-202ENST00000451053 hADV29S1A0JD25 119 aa7.91□□□□□ -1.14
VPS33A-202ENST00000451053 K7EP34 96 aa7.91□□□□□ -1.14
VPS33A-202ENST00000451053 ZNF861PO60384 105 aa7.91□□□□□ -1.14
VPS33A-202ENST00000451053 TRACP01848 142 aa7.91□□□□□ -1.14
VPS33A-202ENST00000451053 A0A1B0GV90 55 aa7.9□□□□□ -1.14
VPS33A-202ENST00000451053 FAM218AQ96MZ4 157 aa7.9□□□□□ -1.14
VPS33A-202ENST00000451053 GHRHP01286 108 aa7.89□□□□□ -1.15
VPS33A-202ENST00000451053 Q9BRP9 147 aa7.88□□□□□ -1.15
VPS33A-202ENST00000451053 HIGD2AQ9BW72 106 aa7.88□□□□□ -1.15
VPS33A-202ENST00000451053 OCIAD2Q56VL3 154 aa7.87□□□□□ -1.15
VPS33A-202ENST00000451053 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.87□□□□□ -1.15
VPS33A-202ENST00000451053 H3BMG7 143 aa7.86□□□□□ -1.15
VPS33A-202ENST00000451053 H3BQ85 93 aa7.86□□□□□ -1.15
VPS33A-202ENST00000451053 SMCR5Q8TEV8 140 aa7.86□□□□□ -1.15
VPS33A-202ENST00000451053 FLG2Q5D862 2391 aaPredicted RBP7.85□□□□□ -1.15
VPS33A-202ENST00000451053 ORMDL1Q9P0S3 153 aa7.85□□□□□ -1.15
VPS33A-202ENST00000451053 C9JAW5 83 aa7.84□□□□□ -1.15
VPS33A-202ENST00000451053 Q6ZQY7 126 aa7.84□□□□□ -1.15
VPS33A-202ENST00000451053 UBE2V1Q13404 147 aa7.83□□□□□ -1.16
VPS33A-202ENST00000451053 ZNF706Q9Y5V0 76 aaPredicted RBP7.83□□□□□ -1.16
VPS33A-202ENST00000451053 KRTAP1-4P0C5Y4 121 aa7.82□□□□□ -1.16
VPS33A-202ENST00000451053 PPDPFLQ8WWR9 84 aa7.82□□□□□ -1.16
VPS33A-202ENST00000451053 KRTAP29-1A8MX34 341 aaPredicted RBP7.81□□□□□ -1.16
VPS33A-202ENST00000451053 H3BT86 120 aa7.81□□□□□ -1.16
VPS33A-202ENST00000451053 ERC2-IT1O76042 136 aa7.81□□□□□ -1.16
VPS33A-202ENST00000451053 OXTP01178 125 aa7.81□□□□□ -1.16
VPS33A-202ENST00000451053 F8W1H4 67 aa7.8□□□□□ -1.16
VPS33A-202ENST00000451053 TMEM256-PLSCR3K7ERE1 68 aa7.8□□□□□ -1.16
VPS33A-202ENST00000451053 BAALC-AS2P0C853 105 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms