RNA–Protein interactions for RNA: ENST00000447194.1

LINC01790-201, Transcript of long intergenic non-protein coding RNA 1790, humanhuman

TSL 2 BASIC

Gene LINC01790, Length 2,852 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01790-201ENST00000447194 SFT2D2O95562 160 aa0.67□□□□□ -2.3
LINC01790-201ENST00000447194 SPINK13Q1W4C9 94 aa0.67□□□□□ -2.3
LINC01790-201ENST00000447194 KRTAP21-2Q3LI59 83 aa0.67□□□□□ -2.3
LINC01790-201ENST00000447194 PYY3Q5JQD4 70 aa0.67□□□□□ -2.3
LINC01790-201ENST00000447194 Q6ZQY7 126 aa0.67□□□□□ -2.3
LINC01790-201ENST00000447194 TSLPQ969D9 159 aa0.67□□□□□ -2.3
LINC01790-201ENST00000447194 URB1O60287 2271 aaKnown RBP0.66□□□□□ -2.3
LINC01790-201ENST00000447194 DOCK10Q96BY6 2186 aa0.66□□□□□ -2.3
LINC01790-201ENST00000447194 WDR87Q6ZQQ6 2873 aa0.66□□□□□ -2.3
LINC01790-201ENST00000447194 COL7A1Q02388 2944 aa0.66□□□□□ -2.3
LINC01790-201ENST00000447194 A0A087WTM6 91 aa0.66□□□□□ -2.3
LINC01790-201ENST00000447194 ARL14EPLP0DKL9 152 aa0.66□□□□□ -2.3
LINC01790-201ENST00000447194 LCN9Q8WX39 176 aa0.66□□□□□ -2.3
LINC01790-201ENST00000447194 DYNLRB1Q9NP97 96 aa0.66□□□□□ -2.3
LINC01790-201ENST00000447194 LINC00474Q9P2X8 69 aa0.66□□□□□ -2.3
LINC01790-201ENST00000447194 UQCR10Q9UDW1 63 aa0.66□□□□□ -2.3
LINC01790-201ENST00000447194 V9GYH0 126 aa0.66□□□□□ -2.3
LINC01790-201ENST00000447194 V9GYV3 84 aa0.66□□□□□ -2.3
LINC01790-201ENST00000447194 UNC13CQ8NB66 2214 aa0.66□□□□□ -2.3
LINC01790-201ENST00000447194 DMXL1Q9Y485 3027 aa0.66□□□□□ -2.3
LINC01790-201ENST00000447194 A0A0C4DFX4 3053 aa0.66□□□□□ -2.3
LINC01790-201ENST00000447194 A0A096LNT2 108 aa0.66□□□□□ -2.3
LINC01790-201ENST00000447194 SPRR2EP22531 72 aa0.66□□□□□ -2.3
LINC01790-201ENST00000447194 SPRR2BP35325 72 aa0.66□□□□□ -2.3
LINC01790-201ENST00000447194 SPRR2AP35326 72 aa0.66□□□□□ -2.3
LINC01790-201ENST00000447194 EFNA4P52798 201 aa0.66□□□□□ -2.3
LINC01790-201ENST00000447194 GNG11P61952 73 aa0.66□□□□□ -2.3
LINC01790-201ENST00000447194 C10orf128Q5T292 105 aa0.66□□□□□ -2.3
LINC01790-201ENST00000447194 C20orf197Q8N268 126 aa0.66□□□□□ -2.3
LINC01790-201ENST00000447194 SERP2Q8N6R1 65 aa0.66□□□□□ -2.3
LINC01790-201ENST00000447194 SMR3AQ99954 134 aa0.66□□□□□ -2.3
LINC01790-201ENST00000447194 CDC42SE2Q9NRR3 84 aa0.66□□□□□ -2.3
LINC01790-201ENST00000447194 MKI67P46013 3256 aaKnown RBP0.65□□□□□ -2.3
LINC01790-201ENST00000447194 hADV29S1A0JD25 119 aa0.65□□□□□ -2.31
LINC01790-201ENST00000447194 CCL18P55774 89 aa0.65□□□□□ -2.31
LINC01790-201ENST00000447194 EDDM3BP56851 147 aa0.65□□□□□ -2.31
LINC01790-201ENST00000447194 VMO1Q7Z5L0 202 aa0.65□□□□□ -2.31
LINC01790-201ENST00000447194 BAGE3Q86Y29 109 aa0.65□□□□□ -2.31
LINC01790-201ENST00000447194 WFDC6Q9BQY6 131 aa0.65□□□□□ -2.31
LINC01790-201ENST00000447194 NDUFA4L2Q9NRX3 87 aa0.65□□□□□ -2.31
LINC01790-201ENST00000447194 FAIMQ9NVQ4 179 aa0.65□□□□□ -2.31
LINC01790-201ENST00000447194 PRO1854Q9UHT4 67 aa0.65□□□□□ -2.31
LINC01790-201ENST00000447194 RABAC1Q9UI14 185 aa0.65□□□□□ -2.31
LINC01790-201ENST00000447194 R4GMQ9 66 aa0.65□□□□□ -2.31
LINC01790-201ENST00000447194 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.65□□□□□ -2.31
LINC01790-201ENST00000447194 SNCAP37840 140 aa0.65□□□□□ -2.31
LINC01790-201ENST00000447194 SEC11AP67812 179 aa0.65□□□□□ -2.31
LINC01790-201ENST00000447194 CCL19Q99731 98 aa0.65□□□□□ -2.31
LINC01790-201ENST00000447194 PMCHL2Q9BQD1 86 aa0.65□□□□□ -2.31
LINC01790-201ENST00000447194 CACFD1Q9UGQ2 172 aa0.65□□□□□ -2.31
LINC01790-201ENST00000447194 INTS1Q8N201 2190 aaKnown RBP0.64□□□□□ -2.31
LINC01790-201ENST00000447194 C10orf142B7Z368 130 aa0.64□□□□□ -2.31
LINC01790-201ENST00000447194 GNGT2O14610 69 aa0.64□□□□□ -2.31
LINC01790-201ENST00000447194 NCR3O14931 201 aa0.64□□□□□ -2.31
LINC01790-201ENST00000447194 KRTAP10-4P60372 401 aaPredicted RBP0.64□□□□□ -2.31
LINC01790-201ENST00000447194 LINC00208Q96KT6 92 aa0.64□□□□□ -2.31
LINC01790-201ENST00000447194 ZZEF1O43149 2961 aa0.64□□□□□ -2.31
LINC01790-201ENST00000447194 TET1Q8NFU7 2136 aa0.64□□□□□ -2.31
LINC01790-201ENST00000447194 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.64□□□□□ -2.31
LINC01790-201ENST00000447194 TRAV22A0A0B4J277 110 aa0.64□□□□□ -2.31
LINC01790-201ENST00000447194 TRBV30A0A0K0K1B3 111 aa0.64□□□□□ -2.31
LINC01790-201ENST00000447194 TMEM14DPA8MWL7 114 aa0.64□□□□□ -2.31
LINC01790-201ENST00000447194 ANGP03950 147 aaKnown RBP0.64□□□□□ -2.31
LINC01790-201ENST00000447194 TFF1P04155 84 aa0.64□□□□□ -2.31
LINC01790-201ENST00000447194 COX17Q14061 63 aa0.64□□□□□ -2.31
LINC01790-201ENST00000447194 Q8N6K4 173 aa0.64□□□□□ -2.31
LINC01790-201ENST00000447194 NPVFQ9HCQ7 196 aa0.64□□□□□ -2.31
LINC01790-201ENST00000447194 PLIN4Q96Q06 1357 aa0.64□□□□□ -2.31
LINC01790-201ENST00000447194 SNRNP200O75643 2136 aaKnown RBP0.64□□□□□ -2.31
LINC01790-201ENST00000447194 PPP1R17O96001 155 aa0.63□□□□□ -2.31
LINC01790-201ENST00000447194 SPAG11BQ08648 103 aa0.63□□□□□ -2.31
LINC01790-201ENST00000447194 SPAG11AQ6PDA7 123 aa0.63□□□□□ -2.31
LINC01790-201ENST00000447194 CRYM-AS1A6NIL9 109 aa0.63□□□□□ -2.31
LINC01790-201ENST00000447194 K7EP34 96 aa0.63□□□□□ -2.31
LINC01790-201ENST00000447194 UQCR11O14957 56 aa0.63□□□□□ -2.31
LINC01790-201ENST00000447194 FXYD6P3P58550 94 aa0.63□□□□□ -2.31
LINC01790-201ENST00000447194 KRTAP12-4P60329 112 aa0.63□□□□□ -2.31
LINC01790-201ENST00000447194 TMEM170BQ5T4T1 132 aa0.63□□□□□ -2.31
LINC01790-201ENST00000447194 MUC12Q9UKN1 5478 aa0.63□□□□□ -2.31
LINC01790-201ENST00000447194 LPAP08519 4548 aa0.63□□□□□ -2.31
LINC01790-201ENST00000447194 A0A1W2PPM0 123 aa0.63□□□□□ -2.31
LINC01790-201ENST00000447194 SYS1-DBNDD2H3BUS1 97 aa0.63□□□□□ -2.31
LINC01790-201ENST00000447194 HMGN4O00479 90 aa0.63□□□□□ -2.31
LINC01790-201ENST00000447194 SAA2P0DJI9 122 aaPredicted RBP0.63□□□□□ -2.31
LINC01790-201ENST00000447194 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.63□□□□□ -2.31
LINC01790-201ENST00000447194 FAM213BQ8TBF2 198 aa0.63□□□□□ -2.31
LINC01790-201ENST00000447194 SMIM4Q8WVI0 70 aa0.63□□□□□ -2.31
LINC01790-201ENST00000447194 LINC01600Q96MT4 127 aa0.63□□□□□ -2.31
LINC01790-201ENST00000447194 Q96NJ1 140 aa0.63□□□□□ -2.31
LINC01790-201ENST00000447194 NXT2Q9NPJ8 142 aaKnown RBP0.63□□□□□ -2.31
LINC01790-201ENST00000447194 TRBV25-1A0A075B6N4 114 aa0.62□□□□□ -2.31
LINC01790-201ENST00000447194 CHKB-CPT1BH3BT56 60 aa0.62□□□□□ -2.31
LINC01790-201ENST00000447194 H7BZZ5 65 aa0.62□□□□□ -2.31
LINC01790-201ENST00000447194 FXYD1O00168 92 aa0.62□□□□□ -2.31
LINC01790-201ENST00000447194 APOC3P02656 99 aa0.62□□□□□ -2.31
LINC01790-201ENST00000447194 MUC3AQ02505 3323 aa0.62□□□□□ -2.31
LINC01790-201ENST00000447194 IGLC7A0M8Q6 106 aa0.62□□□□□ -2.31
LINC01790-201ENST00000447194 K7EIL1 84 aa0.62□□□□□ -2.31
LINC01790-201ENST00000447194 TRAPPC2P0DI81 140 aa0.62□□□□□ -2.31
LINC01790-201ENST00000447194 TRAPPC2BP0DI82 140 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms