RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 UQCRQO14949 82 aa4.8□□□□□ -1.64
SF3A3P1-201ENST00000446317 PHF5AQ7RTV0 110 aaKnown RBP4.8□□□□□ -1.64
SF3A3P1-201ENST00000446317 TEN1Q86WV5 123 aa4.8□□□□□ -1.64
SF3A3P1-201ENST00000446317 LITAFQ99732 161 aa4.8□□□□□ -1.64
SF3A3P1-201ENST00000446317 KRTAP17-1Q9BYP8 105 aa4.8□□□□□ -1.64
SF3A3P1-201ENST00000446317 A0A087WYN8 130 aa4.79□□□□□ -1.64
SF3A3P1-201ENST00000446317 SCXQ7RTU7 201 aa4.79□□□□□ -1.64
SF3A3P1-201ENST00000446317 KRTAP7-1Q8IUC3 87 aa4.79□□□□□ -1.64
SF3A3P1-201ENST00000446317 MUSTN1Q8IVN3 82 aa4.79□□□□□ -1.64
SF3A3P1-201ENST00000446317 SPACA4Q8TDM5 124 aa4.79□□□□□ -1.64
SF3A3P1-201ENST00000446317 RPL37AP8A6NKH3 93 aa4.78□□□□□ -1.64
SF3A3P1-201ENST00000446317 SRSF9Q13242 221 aaKnown RBP eCLIP4.78□□□□□ -1.64
SF3A3P1-201ENST00000446317 CIRBPQ14011 172 aaKnown RBP4.78□□□□□ -1.64
SF3A3P1-201ENST00000446317 CIRBP-AS1Q8TBR5 109 aa4.78□□□□□ -1.64
SF3A3P1-201ENST00000446317 HIST1H4GQ99525 98 aa4.78□□□□□ -1.64
SF3A3P1-201ENST00000446317 TRBV20-1A0A075B6N2 111 aa4.77□□□□□ -1.65
SF3A3P1-201ENST00000446317 C3orf22Q8N5N4 141 aa4.77□□□□□ -1.65
SF3A3P1-201ENST00000446317 LINC00308Q8TCZ7 52 aa4.77□□□□□ -1.65
SF3A3P1-201ENST00000446317 TLX1NBP0CAT3 122 aa4.76□□□□□ -1.65
SF3A3P1-201ENST00000446317 TMEM258P61165 79 aa4.76□□□□□ -1.65
SF3A3P1-201ENST00000446317 KRTAP11-1Q8IUC1 163 aa4.76□□□□□ -1.65
SF3A3P1-201ENST00000446317 IGKV2-28A0A075B6P5 120 aa4.75□□□□□ -1.65
SF3A3P1-201ENST00000446317 IGKV2D-28P01615 120 aa4.75□□□□□ -1.65
SF3A3P1-201ENST00000446317 COX17Q14061 63 aa4.75□□□□□ -1.65
SF3A3P1-201ENST00000446317 C9orf153Q5TBE3 101 aa4.75□□□□□ -1.65
SF3A3P1-201ENST00000446317 SFTA2Q6UW10 78 aa4.75□□□□□ -1.65
SF3A3P1-201ENST00000446317 LINC01600Q96MT4 127 aa4.75□□□□□ -1.65
SF3A3P1-201ENST00000446317 NAA38Q9BRA0 125 aaKnown RBP4.75□□□□□ -1.65
SF3A3P1-201ENST00000446317 C22orf24Q9Y442 160 aa4.75□□□□□ -1.65
SF3A3P1-201ENST00000446317 TRBV7-7A0A0K0K1E9 115 aa4.75□□□□□ -1.65
SF3A3P1-201ENST00000446317 FAM240AA0A1B0GVK7 77 aa4.75□□□□□ -1.65
SF3A3P1-201ENST00000446317 CRYGAP11844 174 aa4.75□□□□□ -1.65
SF3A3P1-201ENST00000446317 VPREB1P12018 145 aa4.75□□□□□ -1.65
SF3A3P1-201ENST00000446317 NKAPP1Q8N9T2 125 aa4.75□□□□□ -1.65
SF3A3P1-201ENST00000446317 BIRC6Q9NR09 4857 aa4.74□□□□□ -1.65
SF3A3P1-201ENST00000446317 KIAA1109Q2LD37 5005 aa4.74□□□□□ -1.65
SF3A3P1-201ENST00000446317 FAT1Q14517 4588 aa4.74□□□□□ -1.65
SF3A3P1-201ENST00000446317 HSPG2P98160 4391 aa4.74□□□□□ -1.65
SF3A3P1-201ENST00000446317 H7C2G1 150 aa4.74□□□□□ -1.65
SF3A3P1-201ENST00000446317 K7ERJ3 54 aa4.74□□□□□ -1.65
SF3A3P1-201ENST00000446317 TIMM17BO60830 172 aa4.74□□□□□ -1.65
SF3A3P1-201ENST00000446317 SCGB1C2P0DMR2 95 aa4.74□□□□□ -1.65
SF3A3P1-201ENST00000446317 UBE2BP63146 152 aa4.74□□□□□ -1.65
SF3A3P1-201ENST00000446317 Q6ZSA8 131 aa4.74□□□□□ -1.65
SF3A3P1-201ENST00000446317 CEND1Q8N111 149 aa4.74□□□□□ -1.65
SF3A3P1-201ENST00000446317 C7orf33Q8WU49 177 aa4.74□□□□□ -1.65
SF3A3P1-201ENST00000446317 LINC00167Q96N53 147 aa4.74□□□□□ -1.65
SF3A3P1-201ENST00000446317 RYR1P21817 5038 aa4.73□□□□□ -1.65
SF3A3P1-201ENST00000446317 FXYD2P54710 66 aa4.73□□□□□ -1.65
SF3A3P1-201ENST00000446317 PLAC8Q9NZF1 115 aa4.73□□□□□ -1.65
SF3A3P1-201ENST00000446317 MRPL55Q7Z7F7 128 aaKnown RBP4.72□□□□□ -1.65
SF3A3P1-201ENST00000446317 LINC00474Q9P2X8 69 aa4.72□□□□□ -1.65
SF3A3P1-201ENST00000446317 TRBV10-3A0A0K0K1G6 114 aa4.71□□□□□ -1.66
SF3A3P1-201ENST00000446317 S100A7L2Q5SY68 101 aa4.71□□□□□ -1.66
SF3A3P1-201ENST00000446317 GAGE2AQ6NT46 116 aa4.71□□□□□ -1.66
SF3A3P1-201ENST00000446317 NDUFC2O95298 119 aa4.7□□□□□ -1.66
SF3A3P1-201ENST00000446317 RPL13AP40429 203 aaKnown RBP4.7□□□□□ -1.66
SF3A3P1-201ENST00000446317 C1orf195Q5TG92 126 aa4.7□□□□□ -1.66
SF3A3P1-201ENST00000446317 ANKRD29Q8N6D5 301 aa4.7□□□□□ -1.66
SF3A3P1-201ENST00000446317 LINC00337Q8N6G1 96 aa4.7□□□□□ -1.66
SF3A3P1-201ENST00000446317 NHP2Q9NX24 153 aaKnown RBP4.7□□□□□ -1.66
SF3A3P1-201ENST00000446317 PKIGQ9Y2B9 76 aa4.7□□□□□ -1.66
SF3A3P1-201ENST00000446317 M0R378 163 aa4.69□□□□□ -1.66
SF3A3P1-201ENST00000446317 TRACP01848 142 aa4.69□□□□□ -1.66
SF3A3P1-201ENST00000446317 ACYP1P07311 99 aa4.69□□□□□ -1.66
SF3A3P1-201ENST00000446317 COX7CP15954 63 aa4.69□□□□□ -1.66
SF3A3P1-201ENST00000446317 C1orf137Q5JT78 98 aa4.69□□□□□ -1.66
SF3A3P1-201ENST00000446317 Q5XG85 94 aa4.69□□□□□ -1.66
SF3A3P1-201ENST00000446317 PSORS1C2Q9UIG4 136 aa4.69□□□□□ -1.66
SF3A3P1-201ENST00000446317 CFC1BP0CG36 223 aa4.69□□□□□ -1.66
SF3A3P1-201ENST00000446317 CFC1P0CG37 223 aa4.69□□□□□ -1.66
SF3A3P1-201ENST00000446317 COPS9Q8WXC6 57 aa4.69□□□□□ -1.66
SF3A3P1-201ENST00000446317 LAMTOR3Q9UHA4 124 aa4.69□□□□□ -1.66
SF3A3P1-201ENST00000446317 IGLV1-50A0A075B6I6 118 aa4.68□□□□□ -1.66
SF3A3P1-201ENST00000446317 IGLV5-37A0A075B6J1 123 aa4.68□□□□□ -1.66
SF3A3P1-201ENST00000446317 RPL37AP61513 92 aaKnown RBP4.68□□□□□ -1.66
SF3A3P1-201ENST00000446317 PRLHP81277 87 aa4.68□□□□□ -1.66
SF3A3P1-201ENST00000446317 C4orf26Q17RF5 130 aa4.68□□□□□ -1.66
SF3A3P1-201ENST00000446317 LOC107984156A0A0G2JMH3 177 aa4.67□□□□□ -1.66
SF3A3P1-201ENST00000446317 Q1RN00 199 aa4.67□□□□□ -1.66
SF3A3P1-201ENST00000446317 Q5VSD8 79 aa4.67□□□□□ -1.66
SF3A3P1-201ENST00000446317 HRCT1Q6UXD1 115 aa4.67□□□□□ -1.66
SF3A3P1-201ENST00000446317 FAM19A1Q7Z5A9 133 aa4.67□□□□□ -1.66
SF3A3P1-201ENST00000446317 ARL17AQ8IVW1 177 aa4.67□□□□□ -1.66
SF3A3P1-201ENST00000446317 KRTAP4-5Q9BYR2 181 aa4.67□□□□□ -1.66
SF3A3P1-201ENST00000446317 TRAV23DV6A0A075B6W5 121 aa4.66□□□□□ -1.66
SF3A3P1-201ENST00000446317 ATOX1O00244 68 aa4.66□□□□□ -1.66
SF3A3P1-201ENST00000446317 CDK2AP2O75956 126 aa4.66□□□□□ -1.66
SF3A3P1-201ENST00000446317 CD164Q04900 197 aa4.66□□□□□ -1.66
SF3A3P1-201ENST00000446317 SMIM11BQ8TCY0 68 aa4.66□□□□□ -1.66
SF3A3P1-201ENST00000446317 HERC2O95714 4834 aa4.65□□□□□ -1.66
SF3A3P1-201ENST00000446317 IGLV6-57P01721 117 aa4.65□□□□□ -1.66
SF3A3P1-201ENST00000446317 REG3GQ6UW15 175 aa4.65□□□□□ -1.66
SF3A3P1-201ENST00000446317 TRBV10-2A0A0K0K1G8 114 aa4.64□□□□□ -1.67
SF3A3P1-201ENST00000446317 EPM2AB3EWF7 344 aa4.64□□□□□ -1.67
SF3A3P1-201ENST00000446317 UBE2AP49459 152 aa4.64□□□□□ -1.67
SF3A3P1-201ENST00000446317 C6orf99Q4VX62 202 aa4.64□□□□□ -1.67
SF3A3P1-201ENST00000446317 TRAV13-2A0A0B4J235 113 aa4.63□□□□□ -1.67
SF3A3P1-201ENST00000446317 FAM236AA0A1B0GUQ0 79 aa4.63□□□□□ -1.67
SF3A3P1-201ENST00000446317 FAM236BA0A1B0GV22 79 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 195.5 ms