RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 C1orf195Q5TG92 126 aa6.03□□□□□ -1.44
COPB1-202ENST00000439561 LINC00612Q8N6U2 182 aa6.03□□□□□ -1.44
COPB1-202ENST00000439561 ESRGQ1W209 222 aa6.03□□□□□ -1.44
COPB1-202ENST00000439561 PSPHP1O15172 72 aa6.02□□□□□ -1.45
COPB1-202ENST00000439561 C16orf95Q9H693 158 aa6.02□□□□□ -1.45
COPB1-202ENST00000439561 IGKV4-1P06312 121 aa6.02□□□□□ -1.45
COPB1-202ENST00000439561 FAM229BQ4G0N7 80 aa6.02□□□□□ -1.45
COPB1-202ENST00000439561 C1orf137Q5JT78 98 aa6.02□□□□□ -1.45
COPB1-202ENST00000439561 WFDC13Q8IUB5 93 aa6.02□□□□□ -1.45
COPB1-202ENST00000439561 TEP1Q99973 2627 aaKnown RBP6.02□□□□□ -1.45
COPB1-202ENST00000439561 KRTAP1-3Q8IUG1 177 aa6.01□□□□□ -1.45
COPB1-202ENST00000439561 Q6ZRP5 223 aa6.01□□□□□ -1.45
COPB1-202ENST00000439561 LINC00528Q8N1L1 170 aa6□□□□□ -1.45
COPB1-202ENST00000439561 KRTAP10-3P60369 221 aa6□□□□□ -1.45
COPB1-202ENST00000439561 Q6ZTC4 211 aa6□□□□□ -1.45
COPB1-202ENST00000439561 Q8NAQ8 132 aa6□□□□□ -1.45
COPB1-202ENST00000439561 ITPR2Q14571 2701 aa5.99□□□□□ -1.45
COPB1-202ENST00000439561 ST20-AS1Q8NBB2 130 aa5.99□□□□□ -1.45
COPB1-202ENST00000439561 C7orf33Q8WU49 177 aa5.99□□□□□ -1.45
COPB1-202ENST00000439561 PRR34Q9NV39 138 aa5.99□□□□□ -1.45
COPB1-202ENST00000439561 V9GYY9 64 aa5.98□□□□□ -1.45
COPB1-202ENST00000439561 GVQW2A0A096LPI5 108 aaPredicted RBP5.98□□□□□ -1.45
COPB1-202ENST00000439561 A0A0G2JQZ4 141 aa5.98□□□□□ -1.45
COPB1-202ENST00000439561 A0A1W2PNN7 141 aa5.98□□□□□ -1.45
COPB1-202ENST00000439561 SERTAD4-AS1Q5TG53 156 aa5.97□□□□□ -1.45
COPB1-202ENST00000439561 BAHCC1Q9P281 2608 aa5.97□□□□□ -1.45
COPB1-202ENST00000439561 A0A096LNI7 61 aa5.97□□□□□ -1.45
COPB1-202ENST00000439561 IGKV2-24A0A0C4DH68 120 aa5.97□□□□□ -1.45
COPB1-202ENST00000439561 INAFM1C9JVW0 142 aa5.97□□□□□ -1.45
COPB1-202ENST00000439561 Q8N377 158 aa5.97□□□□□ -1.45
COPB1-202ENST00000439561 FAM168BA1KXE4 195 aa5.96□□□□□ -1.46
COPB1-202ENST00000439561 OXLD1Q5BKU9 147 aa5.96□□□□□ -1.46
COPB1-202ENST00000439561 OCR1Q9BZK8 76 aa5.96□□□□□ -1.46
COPB1-202ENST00000439561 HIVEP1P15822 2718 aa5.96□□□□□ -1.46
COPB1-202ENST00000439561 EPM2AB3EWF7 344 aa5.95□□□□□ -1.46
COPB1-202ENST00000439561 MP68P56378 58 aa5.95□□□□□ -1.46
COPB1-202ENST00000439561 DHRS4-AS1Q9P1J3 65 aa5.95□□□□□ -1.46
COPB1-202ENST00000439561 DEFB131BA0A096LNP1 70 aa5.95□□□□□ -1.46
COPB1-202ENST00000439561 C15orf56Q8N910 161 aa5.95□□□□□ -1.46
COPB1-202ENST00000439561 K7EQZ3 153 aa5.95□□□□□ -1.46
COPB1-202ENST00000439561 VWFP04275 2813 aa5.94□□□□□ -1.46
COPB1-202ENST00000439561 HELZ2Q9BYK8 2649 aaKnown RBP5.94□□□□□ -1.46
COPB1-202ENST00000439561 LINC00208Q96KT6 92 aa5.93□□□□□ -1.46
COPB1-202ENST00000439561 A0A1W2PNM2 257 aa5.93□□□□□ -1.46
COPB1-202ENST00000439561 ERC2-IT1O76042 136 aa5.93□□□□□ -1.46
COPB1-202ENST00000439561 C1orf64Q8NEQ6 169 aa5.92□□□□□ -1.46
COPB1-202ENST00000439561 A0A087WSZ3 146 aa5.92□□□□□ -1.46
COPB1-202ENST00000439561 KRTAP1-1Q07627 177 aa5.92□□□□□ -1.46
COPB1-202ENST00000439561 Q8NBF4 154 aa5.92□□□□□ -1.46
COPB1-202ENST00000439561 C11orf45Q8TAV5 145 aa5.92□□□□□ -1.46
COPB1-202ENST00000439561 Q6ZRX8 168 aa5.91□□□□□ -1.46
COPB1-202ENST00000439561 SPTSSBQ8NFR3 76 aa5.91□□□□□ -1.46
COPB1-202ENST00000439561 PSCAO43653 123 aa5.91□□□□□ -1.46
COPB1-202ENST00000439561 HCG22E2RYF7 251 aa5.9□□□□□ -1.46
COPB1-202ENST00000439561 PRLHP81277 87 aa5.9□□□□□ -1.46
COPB1-202ENST00000439561 NOTCH1P46531 2555 aa5.9□□□□□ -1.46
COPB1-202ENST00000439561 RPL37AP61513 92 aaKnown RBP5.9□□□□□ -1.47
COPB1-202ENST00000439561 KCNQ1DNQ9H478 68 aa5.9□□□□□ -1.47
COPB1-202ENST00000439561 H0Y9J4 135 aa5.89□□□□□ -1.47
COPB1-202ENST00000439561 AKAP9Q99996 3911 aa5.89□□□□□ -1.47
COPB1-202ENST00000439561 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.89□□□□□ -1.47
COPB1-202ENST00000439561 MRPL55Q7Z7F7 128 aaKnown RBP5.89□□□□□ -1.47
COPB1-202ENST00000439561 UBE2AP49459 152 aa5.88□□□□□ -1.47
COPB1-202ENST00000439561 LINC00476Q8WZB0 136 aa5.88□□□□□ -1.47
COPB1-202ENST00000439561 Q9BRP9 147 aa5.88□□□□□ -1.47
COPB1-202ENST00000439561 CHKB-CPT1BH3BT56 60 aa5.87□□□□□ -1.47
COPB1-202ENST00000439561 NBPF19A0A087WUL8 3843 aa5.87□□□□□ -1.47
COPB1-202ENST00000439561 hDV103S1A0JD37 113 aa5.87□□□□□ -1.47
COPB1-202ENST00000439561 A8MUN3 132 aa5.87□□□□□ -1.47
COPB1-202ENST00000439561 SEC61GP60059 68 aa5.87□□□□□ -1.47
COPB1-202ENST00000439561 ZNF469Q96JG9 3925 aaPredicted RBP5.87□□□□□ -1.47
COPB1-202ENST00000439561 CASC10Q5T4H9 136 aa5.86□□□□□ -1.47
COPB1-202ENST00000439561 REG3GQ6UW15 175 aa5.86□□□□□ -1.47
COPB1-202ENST00000439561 IGLV5-48A0A075B6I7 105 aa5.86□□□□□ -1.47
COPB1-202ENST00000439561 FLNBO75369 2602 aaKnown RBP5.86□□□□□ -1.47
COPB1-202ENST00000439561 MAST4O15021 2626 aa5.86□□□□□ -1.47
COPB1-202ENST00000439561 NDUFB1O75438 58 aa5.86□□□□□ -1.47
COPB1-202ENST00000439561 DSCR10P59022 87 aa5.86□□□□□ -1.47
COPB1-202ENST00000439561 NDUFS5O43920 106 aa5.85□□□□□ -1.47
COPB1-202ENST00000439561 PMAIP1Q13794 54 aa5.85□□□□□ -1.47
COPB1-202ENST00000439561 LINC01556Q5JQF7 62 aa5.85□□□□□ -1.47
COPB1-202ENST00000439561 J3QKU1 62 aa5.85□□□□□ -1.47
COPB1-202ENST00000439561 TRAV22A0A0B4J277 110 aa5.84□□□□□ -1.47
COPB1-202ENST00000439561 H0Y9P7 68 aa5.84□□□□□ -1.47
COPB1-202ENST00000439561 PRR15LQ9BU68 103 aa5.84□□□□□ -1.47
COPB1-202ENST00000439561 IGLV1-50A0A075B6I6 118 aa5.84□□□□□ -1.47
COPB1-202ENST00000439561 TENM1Q9UKZ4 2725 aa5.84□□□□□ -1.47
COPB1-202ENST00000439561 CASC2Q6XLA1 102 aa5.84□□□□□ -1.48
COPB1-202ENST00000439561 PKD1L1Q8TDX9 2849 aa5.83□□□□□ -1.48
COPB1-202ENST00000439561 B9D2Q9BPU9 175 aa5.83□□□□□ -1.48
COPB1-202ENST00000439561 PDZD2O15018 2839 aa5.83□□□□□ -1.48
COPB1-202ENST00000439561 PCOTHQ58A44 107 aa5.83□□□□□ -1.48
COPB1-202ENST00000439561 KRTAP26-1Q6PEX3 210 aa5.83□□□□□ -1.48
COPB1-202ENST00000439561 COL6A5A8TX70 2615 aa5.82□□□□□ -1.48
COPB1-202ENST00000439561 A6NED7 52 aa5.82□□□□□ -1.48
COPB1-202ENST00000439561 IGFL1Q6UW32 110 aa5.82□□□□□ -1.48
COPB1-202ENST00000439561 UBE2DNLQ8IWF7 75 aa5.82□□□□□ -1.48
COPB1-202ENST00000439561 STAB1Q9NY15 2570 aa5.81□□□□□ -1.48
COPB1-202ENST00000439561 NBEAL1Q6ZS30 2694 aa5.79□□□□□ -1.48
COPB1-202ENST00000439561 A0A1B0GW54 56 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms