RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 KRTAP4-16G5E9R7 235 aaPredicted RBP7.83□□□□□ -1.16
SCLT1-202ENST00000439369 H0Y9J4 135 aa7.83□□□□□ -1.16
SCLT1-202ENST00000439369 FAM229AH3BQW9 127 aa7.83□□□□□ -1.16
SCLT1-202ENST00000439369 RPL37AP61513 92 aaKnown RBP7.83□□□□□ -1.16
SCLT1-202ENST00000439369 LRP1BQ9NZR2 4599 aa7.82□□□□□ -1.16
SCLT1-202ENST00000439369 ETDCA0A1B0GVM5 59 aa7.82□□□□□ -1.16
SCLT1-202ENST00000439369 K7ERJ3 54 aa7.82□□□□□ -1.16
SCLT1-202ENST00000439369 VAMP3Q15836 100 aa7.82□□□□□ -1.16
SCLT1-202ENST00000439369 BATFQ16520 125 aa7.82□□□□□ -1.16
SCLT1-202ENST00000439369 SMR3BP02814 79 aaPredicted RBP7.81□□□□□ -1.16
SCLT1-202ENST00000439369 PLA2G1BP04054 148 aaKnown RBP7.81□□□□□ -1.16
SCLT1-202ENST00000439369 Q1RN00 199 aa7.81□□□□□ -1.16
SCLT1-202ENST00000439369 C6orf99Q4VX62 202 aa7.81□□□□□ -1.16
SCLT1-202ENST00000439369 C1orf137Q5JT78 98 aa7.81□□□□□ -1.16
SCLT1-202ENST00000439369 SNHG12Q9BXW3 62 aa7.81□□□□□ -1.16
SCLT1-202ENST00000439369 DNAH8Q96JB1 4490 aa7.81□□□□□ -1.16
SCLT1-202ENST00000439369 H7C2G1 150 aa7.8□□□□□ -1.16
SCLT1-202ENST00000439369 IGLV7-43P04211 117 aa7.8□□□□□ -1.16
SCLT1-202ENST00000439369 Q8N1X5 172 aa7.8□□□□□ -1.16
SCLT1-202ENST00000439369 B5MCH6 92 aa7.79□□□□□ -1.16
SCLT1-202ENST00000439369 J3QL48 77 aa7.79□□□□□ -1.16
SCLT1-202ENST00000439369 TSPAN13O95857 204 aa7.79□□□□□ -1.16
SCLT1-202ENST00000439369 COX7BP24311 80 aa7.79□□□□□ -1.16
SCLT1-202ENST00000439369 ELOF1P60002 83 aaKnown RBP7.79□□□□□ -1.16
SCLT1-202ENST00000439369 Q6ZRX8 168 aa7.79□□□□□ -1.16
SCLT1-202ENST00000439369 FAM19A1Q7Z5A9 133 aa7.79□□□□□ -1.16
SCLT1-202ENST00000439369 KRTAP13-1Q8IUC0 172 aa7.79□□□□□ -1.16
SCLT1-202ENST00000439369 EPPK1P58107 5090 aaKnown RBP7.78□□□□□ -1.16
SCLT1-202ENST00000439369 H0YGX0 51 aa7.78□□□□□ -1.16
SCLT1-202ENST00000439369 INAFM2P0DMQ5 153 aa7.78□□□□□ -1.16
SCLT1-202ENST00000439369 UBE2AP49459 152 aa7.78□□□□□ -1.16
SCLT1-202ENST00000439369 COL5A1-AS1Q5SY13 56 aa7.78□□□□□ -1.16
SCLT1-202ENST00000439369 ZNF861PO60384 105 aa7.77□□□□□ -1.17
SCLT1-202ENST00000439369 COX6CP09669 75 aa7.77□□□□□ -1.17
SCLT1-202ENST00000439369 KRTAP10-4P60372 401 aaPredicted RBP7.77□□□□□ -1.17
SCLT1-202ENST00000439369 DHRS4-AS1Q9P1J3 65 aa7.77□□□□□ -1.17
SCLT1-202ENST00000439369 TRIAP1O43715 76 aa7.76□□□□□ -1.17
SCLT1-202ENST00000439369 PSMB2P49721 201 aa7.76□□□□□ -1.17
SCLT1-202ENST00000439369 Q5VSD8 79 aa7.76□□□□□ -1.17
SCLT1-202ENST00000439369 LYRM7Q5U5X0 104 aa7.75□□□□□ -1.17
SCLT1-202ENST00000439369 TAX1BP3O14907 124 aa7.74□□□□□ -1.17
SCLT1-202ENST00000439369 SNCGO76070 127 aa7.74□□□□□ -1.17
SCLT1-202ENST00000439369 PRLHP81277 87 aa7.74□□□□□ -1.17
SCLT1-202ENST00000439369 APOBP04114 4563 aaKnown RBP7.74□□□□□ -1.17
SCLT1-202ENST00000439369 A0A1B0GX51 115 aa7.73□□□□□ -1.17
SCLT1-202ENST00000439369 C9orf118A6NHY6 69 aa7.73□□□□□ -1.17
SCLT1-202ENST00000439369 SLC25A20O43772 301 aa7.73□□□□□ -1.17
SCLT1-202ENST00000439369 SPINK6Q6UWN8 80 aa7.73□□□□□ -1.17
SCLT1-202ENST00000439369 LINC00575Q6W349 94 aa7.73□□□□□ -1.17
SCLT1-202ENST00000439369 Q9BRP9 147 aa7.72□□□□□ -1.17
SCLT1-202ENST00000439369 SMCR5Q8TEV8 140 aa7.71□□□□□ -1.18
SCLT1-202ENST00000439369 HIGD2AQ9BW72 106 aa7.71□□□□□ -1.18
SCLT1-202ENST00000439369 SCGB1C2P0DMR2 95 aa7.7□□□□□ -1.18
SCLT1-202ENST00000439369 ZNF706Q9Y5V0 76 aaPredicted RBP7.7□□□□□ -1.18
SCLT1-202ENST00000439369 hADV29S1A0JD25 119 aa7.69□□□□□ -1.18
SCLT1-202ENST00000439369 H3BUT2 72 aa7.69□□□□□ -1.18
SCLT1-202ENST00000439369 TRBV20-1A0A075B6N2 111 aa7.68□□□□□ -1.18
SCLT1-202ENST00000439369 A0A1W2PPM0 123 aa7.68□□□□□ -1.18
SCLT1-202ENST00000439369 KIAA1109Q2LD37 5005 aa7.68□□□□□ -1.18
SCLT1-202ENST00000439369 BIRC6Q9NR09 4857 aa7.67□□□□□ -1.18
SCLT1-202ENST00000439369 RYR1P21817 5038 aa7.67□□□□□ -1.18
SCLT1-202ENST00000439369 TRACP01848 142 aa7.67□□□□□ -1.18
SCLT1-202ENST00000439369 FABP2P12104 132 aa7.67□□□□□ -1.18
SCLT1-202ENST00000439369 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.67□□□□□ -1.18
SCLT1-202ENST00000439369 KRTAP17-1Q9BYP8 105 aa7.67□□□□□ -1.18
SCLT1-202ENST00000439369 LST1O00453 97 aa7.66□□□□□ -1.18
SCLT1-202ENST00000439369 ERC2-IT1O76042 136 aa7.66□□□□□ -1.18
SCLT1-202ENST00000439369 GHRHP01286 108 aa7.66□□□□□ -1.18
SCLT1-202ENST00000439369 OCIAD2Q56VL3 154 aa7.66□□□□□ -1.18
SCLT1-202ENST00000439369 CLEC2BQ92478 149 aa7.66□□□□□ -1.18
SCLT1-202ENST00000439369 FAM218AQ96MZ4 157 aa7.66□□□□□ -1.18
SCLT1-202ENST00000439369 NAA38Q9BRA0 125 aaKnown RBP7.66□□□□□ -1.18
SCLT1-202ENST00000439369 HSPG2P98160 4391 aa7.66□□□□□ -1.18
SCLT1-202ENST00000439369 ATXN8Q156A1 80 aa7.65□□□□□ -1.18
SCLT1-202ENST00000439369 PPDPFLQ8WWR9 84 aa7.65□□□□□ -1.18
SCLT1-202ENST00000439369 SPRR4Q96PI1 79 aa7.65□□□□□ -1.18
SCLT1-202ENST00000439369 IGLV5-48A0A075B6I7 105 aa7.64□□□□□ -1.19
SCLT1-202ENST00000439369 H3BQ85 93 aa7.64□□□□□ -1.19
SCLT1-202ENST00000439369 DNAL4O96015 105 aa7.63□□□□□ -1.19
SCLT1-202ENST00000439369 SPRR1BP22528 89 aa7.63□□□□□ -1.19
SCLT1-202ENST00000439369 LINC00483Q53H64 154 aa7.63□□□□□ -1.19
SCLT1-202ENST00000439369 Q6ZQY7 126 aa7.63□□□□□ -1.19
SCLT1-202ENST00000439369 TEX49A0A1B0GTD5 131 aa7.62□□□□□ -1.19
SCLT1-202ENST00000439369 TCL1BO95988 128 aa7.62□□□□□ -1.19
SCLT1-202ENST00000439369 FAM229BQ4G0N7 80 aa7.62□□□□□ -1.19
SCLT1-202ENST00000439369 ST20-AS1Q8NBB2 130 aa7.61□□□□□ -1.19
SCLT1-202ENST00000439369 KRTAP1-4P0C5Y4 121 aa7.6□□□□□ -1.19
SCLT1-202ENST00000439369 SPCS1Q9Y6A9 102 aa7.6□□□□□ -1.19
SCLT1-202ENST00000439369 LINC01547P58512 204 aaPredicted RBP7.59□□□□□ -1.19
SCLT1-202ENST00000439369 ORMDL1Q9P0S3 153 aa7.59□□□□□ -1.19
SCLT1-202ENST00000439369 GAGE2AQ6NT46 116 aa7.58□□□□□ -1.2
SCLT1-202ENST00000439369 VPS13BQ7Z7G8 4022 aa7.57□□□□□ -1.2
SCLT1-202ENST00000439369 K7EP34 96 aa7.57□□□□□ -1.2
SCLT1-202ENST00000439369 GTF2H5Q6ZYL4 71 aa7.57□□□□□ -1.2
SCLT1-202ENST00000439369 Q8N377 158 aa7.57□□□□□ -1.2
SCLT1-202ENST00000439369 DEFB105AQ8NG35 78 aa7.57□□□□□ -1.2
SCLT1-202ENST00000439369 KRTAP4-5Q9BYR2 181 aa7.57□□□□□ -1.2
SCLT1-202ENST00000439369 SRRM2Q9UQ35 2752 aaKnown RBP7.56□□□□□ -1.2
SCLT1-202ENST00000439369 TMEM256-PLSCR3K7ERE1 68 aa7.56□□□□□ -1.2
SCLT1-202ENST00000439369 CRYGAP11844 174 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms