RNA–Protein interactions for RNA: ENST00000439346.5

CHEK2-217, Transcript of checkpoint kinase 2, humanhuman

TSL 4

Gene CHEK2, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-217ENST00000439346 BIVM-ERCC5R4GMW8 1640 aa1.58□□□□□ -2.16
CHEK2-217ENST00000439346 NRAPQ86VF7 1730 aa1.57□□□□□ -2.16
CHEK2-217ENST00000439346 IQGAP2Q13576 1575 aa1.57□□□□□ -2.16
CHEK2-217ENST00000439346 PRO3102Q9H379 93 aa1.57□□□□□ -2.16
CHEK2-217ENST00000439346 TIMM8BQ9Y5J9 83 aaPredicted RBP1.57□□□□□ -2.16
CHEK2-217ENST00000439346 C3P01024 1663 aa1.57□□□□□ -2.16
CHEK2-217ENST00000439346 CADP27708 2225 aa1.56□□□□□ -2.16
CHEK2-217ENST00000439346 ANKRD17O75179 2603 aaKnown RBP1.56□□□□□ -2.16
CHEK2-217ENST00000439346 KIAA0586Q9BVV6 1533 aa1.56□□□□□ -2.16
CHEK2-217ENST00000439346 CNTRLQ7Z7A1 2325 aa1.56□□□□□ -2.16
CHEK2-217ENST00000439346 A0A0D9SG42 100 aa1.56□□□□□ -2.16
CHEK2-217ENST00000439346 GOLGA4Q13439 2230 aaKnown RBP1.55□□□□□ -2.16
CHEK2-217ENST00000439346 CACNA1CQ13936 2221 aa1.55□□□□□ -2.16
CHEK2-217ENST00000439346 LINC00158P58513 81 aa1.55□□□□□ -2.16
CHEK2-217ENST00000439346 KRTAP21-3Q3LHN1 58 aa1.55□□□□□ -2.16
CHEK2-217ENST00000439346 APLNQ9ULZ1 77 aa1.55□□□□□ -2.16
CHEK2-217ENST00000439346 FBN3Q75N90 2809 aa1.55□□□□□ -2.16
CHEK2-217ENST00000439346 ABCA5Q8WWZ7 1642 aa1.55□□□□□ -2.16
CHEK2-217ENST00000439346 KNTC1P50748 2209 aa1.54□□□□□ -2.16
CHEK2-217ENST00000439346 ZDBF2Q9HCK1 2354 aa1.54□□□□□ -2.16
CHEK2-217ENST00000439346 LY75O60449 1722 aa1.53□□□□□ -2.16
CHEK2-217ENST00000439346 QSER1Q2KHR3 1735 aa1.53□□□□□ -2.16
CHEK2-217ENST00000439346 TJP1Q07157 1748 aa1.52□□□□□ -2.17
CHEK2-217ENST00000439346 FAM208AQ9UK61 1670 aaKnown RBP1.52□□□□□ -2.17
CHEK2-217ENST00000439346 ABCC8Q09428 1581 aa1.52□□□□□ -2.17
CHEK2-217ENST00000439346 AGLP35573 1532 aa1.52□□□□□ -2.17
CHEK2-217ENST00000439346 SPRR1AP35321 89 aa1.52□□□□□ -2.17
CHEK2-217ENST00000439346 JMJD1CQ15652 2540 aa1.52□□□□□ -2.17
CHEK2-217ENST00000439346 NRXN3Q9Y4C0 1643 aa1.51□□□□□ -2.17
CHEK2-217ENST00000439346 TMEM167BQ9NRX6 74 aa1.51□□□□□ -2.17
CHEK2-217ENST00000439346 MUC6Q6W4X9 2439 aa1.51□□□□□ -2.17
CHEK2-217ENST00000439346 CDC42BPAQ5VT25 1732 aa1.51□□□□□ -2.17
CHEK2-217ENST00000439346 DDX60LQ5H9U9 1706 aaKnown RBP1.5□□□□□ -2.17
CHEK2-217ENST00000439346 LINC01546A6NGU7 62 aa1.5□□□□□ -2.17
CHEK2-217ENST00000439346 SPINK4O60575 86 aa1.5□□□□□ -2.17
CHEK2-217ENST00000439346 Q5VSD8 79 aa1.5□□□□□ -2.17
CHEK2-217ENST00000439346 SPRR1BP22528 89 aa1.49□□□□□ -2.17
CHEK2-217ENST00000439346 H1FX-AS1Q4G0G2 97 aa1.49□□□□□ -2.17
CHEK2-217ENST00000439346 MINOS1Q5TGZ0 78 aa1.49□□□□□ -2.17
CHEK2-217ENST00000439346 DEFB105AQ8NG35 78 aa1.49□□□□□ -2.17
CHEK2-217ENST00000439346 TNCP24821 2201 aa1.48□□□□□ -2.17
CHEK2-217ENST00000439346 LYNX1G3V0Z9 82 aa1.48□□□□□ -2.17
CHEK2-217ENST00000439346 LELP1Q5T871 98 aa1.48□□□□□ -2.17
CHEK2-217ENST00000439346 LINC00308Q8TCZ7 52 aa1.48□□□□□ -2.17
CHEK2-217ENST00000439346 URB1O60287 2271 aaKnown RBP1.47□□□□□ -2.17
CHEK2-217ENST00000439346 RP1L1Q8IWN7 2480 aaPredicted RBP1.47□□□□□ -2.17
CHEK2-217ENST00000439346 TRPM2O94759 1503 aa1.47□□□□□ -2.17
CHEK2-217ENST00000439346 LOC730098B7Z3J9 87 aa1.47□□□□□ -2.17
CHEK2-217ENST00000439346 WFDC13Q8IUB5 93 aa1.47□□□□□ -2.17
CHEK2-217ENST00000439346 AHCTF1Q8WYP5 2266 aa1.47□□□□□ -2.17
CHEK2-217ENST00000439346 FAM208BQ5VWN6 2430 aa1.47□□□□□ -2.17
CHEK2-217ENST00000439346 CACNA1EQ15878 2313 aa1.46□□□□□ -2.18
CHEK2-217ENST00000439346 H0YAA0 97 aa1.45□□□□□ -2.18
CHEK2-217ENST00000439346 KRTAP10-4P60372 401 aaPredicted RBP1.45□□□□□ -2.18
CHEK2-217ENST00000439346 C6orf48Q9UBA6 75 aa1.44□□□□□ -2.18
CHEK2-217ENST00000439346 NAV3Q8IVL0 2385 aa1.44□□□□□ -2.18
CHEK2-217ENST00000439346 TNRC6CQ9HCJ0 1690 aaKnown RBP1.44□□□□□ -2.18
CHEK2-217ENST00000439346 DDX60Q8IY21 1712 aaKnown RBP1.43□□□□□ -2.18
CHEK2-217ENST00000439346 PRB3Q04118 309 aaPredicted RBP1.43□□□□□ -2.18
CHEK2-217ENST00000439346 KLK9Q2XQG4 91 aa1.43□□□□□ -2.18
CHEK2-217ENST00000439346 NFAT5O94916 1531 aa1.43□□□□□ -2.18
CHEK2-217ENST00000439346 IAPPP10997 89 aa1.42□□□□□ -2.18
CHEK2-217ENST00000439346 TOGARAM1Q9Y4F4 1720 aa1.42□□□□□ -2.18
CHEK2-217ENST00000439346 SORL1Q92673 2214 aa1.42□□□□□ -2.18
CHEK2-217ENST00000439346 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.39□□□□□ -2.194e-20■■■■■ 74.6
CHEK2-217ENST00000439346 DEFB130BP0DP73 79 aa1.39□□□□□ -2.19
CHEK2-217ENST00000439346 DEFB130AP0DP74 79 aa1.39□□□□□ -2.19
CHEK2-217ENST00000439346 DEPDC5O75140 1603 aa1.39□□□□□ -2.19
CHEK2-217ENST00000439346 ATP7AQ04656 1500 aa1.39□□□□□ -2.19
CHEK2-217ENST00000439346 SMIM2Q9BVW6 85 aa1.38□□□□□ -2.19
CHEK2-217ENST00000439346 TENM1Q9UKZ4 2725 aa1.38□□□□□ -2.19
CHEK2-217ENST00000439346 TFF3Q07654 80 aa1.37□□□□□ -2.19
CHEK2-217ENST00000439346 IQGAP1P46940 1657 aa1.36□□□□□ -2.19
CHEK2-217ENST00000439346 C4AP0C0L4 1744 aa1.36□□□□□ -2.19
CHEK2-217ENST00000439346 MROH2BQ7Z745 1585 aa1.36□□□□□ -2.19
CHEK2-217ENST00000439346 SAMD9LQ8IVG5 1584 aa1.36□□□□□ -2.19
CHEK2-217ENST00000439346 ASH1LQ9NR48 2969 aaKnown RBP1.35□□□□□ -2.19
CHEK2-217ENST00000439346 C4BP0C0L5 1744 aa1.35□□□□□ -2.19
CHEK2-217ENST00000439346 COL6A6A6NMZ7 2263 aa1.35□□□□□ -2.19
CHEK2-217ENST00000439346 ROS1P08922 2347 aa1.34□□□□□ -2.19
CHEK2-217ENST00000439346 KIF21BO75037 1637 aa1.34□□□□□ -2.19
CHEK2-217ENST00000439346 BPTFQ12830 3046 aa1.34□□□□□ -2.2
CHEK2-217ENST00000439346 GCC2Q8IWJ2 1684 aa1.33□□□□□ -2.2
CHEK2-217ENST00000439346 LMO7Q8WWI1 1683 aa1.33□□□□□ -2.2
CHEK2-217ENST00000439346 RPS27P42677 84 aaKnown RBP1.33□□□□□ -2.2
CHEK2-217ENST00000439346 RPS27LQ71UM5 84 aaKnown RBP1.33□□□□□ -2.2
CHEK2-217ENST00000439346 PIEZO2Q9H5I5 2752 aa1.33□□□□□ -2.2
CHEK2-217ENST00000439346 SNRPGP62308 76 aaKnown RBP1.32□□□□□ -2.2
CHEK2-217ENST00000439346 DEFB109BQ30KR1 87 aa1.32□□□□□ -2.2
CHEK2-217ENST00000439346 WT1-ASQ06250 92 aa1.3□□□□□ -2.2
CHEK2-217ENST00000439346 CNOT1A5YKK6 2376 aaKnown RBP1.3□□□□□ -2.2
CHEK2-217ENST00000439346 DUOX1Q9NRD9 1551 aa1.3□□□□□ -2.2
CHEK2-217ENST00000439346 PTPRQQ9UMZ3 2332 aa1.29□□□□□ -2.2
CHEK2-217ENST00000439346 WFDC10BQ8IUB3 73 aa1.29□□□□□ -2.2
CHEK2-217ENST00000439346 DOPEY2Q9Y3R5 2298 aa1.28□□□□□ -2.2
CHEK2-217ENST00000439346 H3BUA1 57 aa1.28□□□□□ -2.2
CHEK2-217ENST00000439346 NDUFA1O15239 70 aa1.28□□□□□ -2.2
CHEK2-217ENST00000439346 USF3Q68DE3 2245 aa1.27□□□□□ -2.21
CHEK2-217ENST00000439346 PTPRZ1P23471 2315 aaPredicted RBP1.26□□□□□ -2.21
CHEK2-217ENST00000439346 KAAG1Q9UBP8 84 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms