RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 SMIM11BQ8TCY0 68 aa14.34□□□□□ -0.11
SMARCAL1-208ENST00000434435 DIRC1Q969H9 104 aa14.34□□□□□ -0.11
SMARCAL1-208ENST00000434435 ZNF73O43830 326 aaPredicted RBP14.33□□□□□ -0.12
SMARCAL1-208ENST00000434435 Q1RN00 199 aa14.33□□□□□ -0.12
SMARCAL1-208ENST00000434435 BCE1O60756 84 aa14.32□□□□□ -0.12
SMARCAL1-208ENST00000434435 ETDCA0A1B0GVM5 59 aa14.31□□□□□ -0.12
SMARCAL1-208ENST00000434435 HSPG2P98160 4391 aa14.31□□□□□ -0.12
SMARCAL1-208ENST00000434435 FAM229AH3BQW9 127 aa14.3□□□□□ -0.12
SMARCAL1-208ENST00000434435 C6orf99Q4VX62 202 aa14.3□□□□□ -0.12
SMARCAL1-208ENST00000434435 SNHG12Q9BXW3 62 aa14.3□□□□□ -0.12
SMARCAL1-208ENST00000434435 RYR1P21817 5038 aa14.29□□□□□ -0.12
SMARCAL1-208ENST00000434435 RPL28P46779 137 aaKnown RBP14.29□□□□□ -0.12
SMARCAL1-208ENST00000434435 FAM19A1Q7Z5A9 133 aa14.29□□□□□ -0.12
SMARCAL1-208ENST00000434435 KRTAP4-16G5E9R7 235 aaPredicted RBP14.28□□□□□ -0.12
SMARCAL1-208ENST00000434435 TSPAN13O95857 204 aa14.27□□□□□ -0.13
SMARCAL1-208ENST00000434435 PLA2G1BP04054 148 aaKnown RBP14.27□□□□□ -0.13
SMARCAL1-208ENST00000434435 BIRC6Q9NR09 4857 aa14.26□□□□□ -0.13
SMARCAL1-208ENST00000434435 UBE2AP49459 152 aa14.26□□□□□ -0.13
SMARCAL1-208ENST00000434435 IGLV7-43P04211 117 aa14.25□□□□□ -0.13
SMARCAL1-208ENST00000434435 TRBV7-6A0A0J9YX20 115 aa14.24□□□□□ -0.13
SMARCAL1-208ENST00000434435 B5MCH6 92 aa14.24□□□□□ -0.13
SMARCAL1-208ENST00000434435 COX7BP24311 80 aa14.24□□□□□ -0.13
SMARCAL1-208ENST00000434435 Q5VSD8 79 aa14.24□□□□□ -0.13
SMARCAL1-208ENST00000434435 Q8N1X5 172 aa14.24□□□□□ -0.13
SMARCAL1-208ENST00000434435 KIAA1109Q2LD37 5005 aa14.23□□□□□ -0.13
SMARCAL1-208ENST00000434435 PRLHP81277 87 aa14.23□□□□□ -0.13
SMARCAL1-208ENST00000434435 ELOF1P60002 83 aaKnown RBP14.22□□□□□ -0.13
SMARCAL1-208ENST00000434435 VAMP3Q15836 100 aa14.22□□□□□ -0.13
SMARCAL1-208ENST00000434435 Q6ZRX8 168 aa14.22□□□□□ -0.13
SMARCAL1-208ENST00000434435 VPS13BQ7Z7G8 4022 aa14.22□□□□□ -0.13
SMARCAL1-208ENST00000434435 H0Y9J4 135 aa14.21□□□□□ -0.13
SMARCAL1-208ENST00000434435 PSMB2P49721 201 aa14.21□□□□□ -0.13
SMARCAL1-208ENST00000434435 KRTAP13-1Q8IUC0 172 aa14.2□□□□□ -0.14
SMARCAL1-208ENST00000434435 TRIAP1O43715 76 aa14.19□□□□□ -0.14
SMARCAL1-208ENST00000434435 ZNF861PO60384 105 aa14.19□□□□□ -0.14
SMARCAL1-208ENST00000434435 KRTAP10-4P60372 401 aaPredicted RBP14.19□□□□□ -0.14
SMARCAL1-208ENST00000434435 FAT1Q14517 4588 aa14.18□□□□□ -0.14
SMARCAL1-208ENST00000434435 COL5A1-AS1Q5SY13 56 aa14.18□□□□□ -0.14
SMARCAL1-208ENST00000434435 COX6CP09669 75 aa14.16□□□□□ -0.14
SMARCAL1-208ENST00000434435 TAX1BP3O14907 124 aa14.15□□□□□ -0.14
SMARCAL1-208ENST00000434435 HIGD2AQ9BW72 106 aa14.15□□□□□ -0.14
SMARCAL1-208ENST00000434435 H0YGX0 51 aa14.14□□□□□ -0.15
SMARCAL1-208ENST00000434435 NAA38Q9BRA0 125 aaKnown RBP14.14□□□□□ -0.15
SMARCAL1-208ENST00000434435 Q9BRP9 147 aa14.14□□□□□ -0.15
SMARCAL1-208ENST00000434435 KRTAP17-1Q9BYP8 105 aa14.14□□□□□ -0.15
SMARCAL1-208ENST00000434435 DHRS4-AS1Q9P1J3 65 aa14.14□□□□□ -0.15
SMARCAL1-208ENST00000434435 SMCR5Q8TEV8 140 aa14.12□□□□□ -0.15
SMARCAL1-208ENST00000434435 C9orf118A6NHY6 69 aa14.11□□□□□ -0.15
SMARCAL1-208ENST00000434435 SLC25A20O43772 301 aa14.11□□□□□ -0.15
SMARCAL1-208ENST00000434435 INAFM2P0DMQ5 153 aa14.11□□□□□ -0.15
SMARCAL1-208ENST00000434435 H3BUT2 72 aa14.1□□□□□ -0.15
SMARCAL1-208ENST00000434435 SCGB1C2P0DMR2 95 aa14.1□□□□□ -0.15
SMARCAL1-208ENST00000434435 LINC00575Q6W349 94 aa14.1□□□□□ -0.15
SMARCAL1-208ENST00000434435 SPINK6Q6UWN8 80 aa14.09□□□□□ -0.15
SMARCAL1-208ENST00000434435 LYRM7Q5U5X0 104 aa14.08□□□□□ -0.16
SMARCAL1-208ENST00000434435 CLEC2BQ92478 149 aa14.06□□□□□ -0.16
SMARCAL1-208ENST00000434435 hADV29S1A0JD25 119 aa14.05□□□□□ -0.16
SMARCAL1-208ENST00000434435 ERC2-IT1O76042 136 aa14.05□□□□□ -0.16
SMARCAL1-208ENST00000434435 SNCGO76070 127 aa14.05□□□□□ -0.16
SMARCAL1-208ENST00000434435 FAM218AQ96MZ4 157 aa14.05□□□□□ -0.16
SMARCAL1-208ENST00000434435 SRRM2Q9UQ35 2752 aaKnown RBP14.05□□□□□ -0.16
SMARCAL1-208ENST00000434435 PKHD1L1Q86WI1 4243 aa14.03□□□□□ -0.16
SMARCAL1-208ENST00000434435 A0A1B0GX51 115 aa14.03□□□□□ -0.16
SMARCAL1-208ENST00000434435 A0A1W2PPM0 123 aa14.02□□□□□ -0.17
SMARCAL1-208ENST00000434435 ZNF706Q9Y5V0 76 aaPredicted RBP14.02□□□□□ -0.17
SMARCAL1-208ENST00000434435 FABP2P12104 132 aa13.99□□□□□ -0.17
SMARCAL1-208ENST00000434435 LST1O00453 97 aa13.97□□□□□ -0.17
SMARCAL1-208ENST00000434435 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.97□□□□□ -0.17
SMARCAL1-208ENST00000434435 Q6ZQY7 126 aa13.97□□□□□ -0.17
SMARCAL1-208ENST00000434435 ST20-AS1Q8NBB2 130 aa13.97□□□□□ -0.17
SMARCAL1-208ENST00000434435 SPRR4Q96PI1 79 aa13.97□□□□□ -0.17
SMARCAL1-208ENST00000434435 HERC2O95714 4834 aa13.97□□□□□ -0.17
SMARCAL1-208ENST00000434435 TCL1BO95988 128 aa13.96□□□□□ -0.17
SMARCAL1-208ENST00000434435 DNAL4O96015 105 aa13.96□□□□□ -0.17
SMARCAL1-208ENST00000434435 TRBV20-1A0A075B6N2 111 aa13.95□□□□□ -0.18
SMARCAL1-208ENST00000434435 ATXN8Q156A1 80 aa13.95□□□□□ -0.18
SMARCAL1-208ENST00000434435 KRTAP4-5Q9BYR2 181 aa13.95□□□□□ -0.18
SMARCAL1-208ENST00000434435 TRACP01848 142 aa13.94□□□□□ -0.18
SMARCAL1-208ENST00000434435 GAGE2AQ6NT46 116 aa13.93□□□□□ -0.18
SMARCAL1-208ENST00000434435 DEFB105AQ8NG35 78 aa13.91□□□□□ -0.18
SMARCAL1-208ENST00000434435 IGLV5-48A0A075B6I7 105 aa13.9□□□□□ -0.18
SMARCAL1-208ENST00000434435 OCIAD2Q56VL3 154 aa13.9□□□□□ -0.18
SMARCAL1-208ENST00000434435 SPCS1Q9Y6A9 102 aa13.9□□□□□ -0.18
SMARCAL1-208ENST00000434435 KRTAP1-4P0C5Y4 121 aa13.89□□□□□ -0.19
SMARCAL1-208ENST00000434435 LINC00483Q53H64 154 aa13.89□□□□□ -0.19
SMARCAL1-208ENST00000434435 TEX49A0A1B0GTD5 131 aa13.88□□□□□ -0.19
SMARCAL1-208ENST00000434435 LINC01547P58512 204 aaPredicted RBP13.88□□□□□ -0.19
SMARCAL1-208ENST00000434435 GHRHP01286 108 aa13.87□□□□□ -0.19
SMARCAL1-208ENST00000434435 SPRR1BP22528 89 aa13.87□□□□□ -0.19
SMARCAL1-208ENST00000434435 ORMDL1Q9P0S3 153 aa13.87□□□□□ -0.19
SMARCAL1-208ENST00000434435 PPDPFLQ8WWR9 84 aa13.86□□□□□ -0.19
SMARCAL1-208ENST00000434435 FAM229BQ4G0N7 80 aa13.85□□□□□ -0.19
SMARCAL1-208ENST00000434435 Q8N377 158 aa13.85□□□□□ -0.19
SMARCAL1-208ENST00000434435 ANAPC11Q9NYG5 84 aa13.85□□□□□ -0.19
SMARCAL1-208ENST00000434435 H3BQ85 93 aa13.83□□□□□ -0.2
SMARCAL1-208ENST00000434435 K7EP34 96 aa13.81□□□□□ -0.2
SMARCAL1-208ENST00000434435 FLG2Q5D862 2391 aaPredicted RBP13.81□□□□□ -0.2
SMARCAL1-208ENST00000434435 H3BMG7 143 aa13.8□□□□□ -0.2
SMARCAL1-208ENST00000434435 CRYGAP11844 174 aa13.8□□□□□ -0.2
SMARCAL1-208ENST00000434435 LAMTOR3Q9UHA4 124 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms