RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 CLLU1Q5K131 121 aa11.73□□□□□ -0.53
PTPRA-207ENST00000431048 SSPOA2VEC9 5147 aa11.72□□□□□ -0.53
PTPRA-207ENST00000431048 CD164Q04900 197 aa11.72□□□□□ -0.53
PTPRA-207ENST00000431048 IFITM2Q01629 132 aa11.71□□□□□ -0.53
PTPRA-207ENST00000431048 USH2AO75445 5202 aa11.7□□□□□ -0.54
PTPRA-207ENST00000431048 MIEN1Q9BRT3 115 aa11.7□□□□□ -0.54
PTPRA-207ENST00000431048 Q5XG85 94 aa11.69□□□□□ -0.54
PTPRA-207ENST00000431048 LAMTOR3Q9UHA4 124 aa11.69□□□□□ -0.54
PTPRA-207ENST00000431048 HINT1P49773 126 aaPredicted RBP11.68□□□□□ -0.54
PTPRA-207ENST00000431048 TSPEAR-AS2P59090 65 aa11.68□□□□□ -0.54
PTPRA-207ENST00000431048 RPS10P5Q9NQ39 176 aa11.68□□□□□ -0.54
PTPRA-207ENST00000431048 LEPROTO15243 131 aa11.67□□□□□ -0.54
PTPRA-207ENST00000431048 CBY1Q9Y3M2 126 aa11.67□□□□□ -0.54
PTPRA-207ENST00000431048 COMMD7Q86VX2 200 aa11.66□□□□□ -0.54
PTPRA-207ENST00000431048 CHCHD1Q96BP2 118 aaKnown RBP11.66□□□□□ -0.54
PTPRA-207ENST00000431048 RHEBQ15382 184 aa11.64□□□□□ -0.55
PTPRA-207ENST00000431048 C1orf195Q5TG92 126 aa11.64□□□□□ -0.55
PTPRA-207ENST00000431048 DHRS4-AS1Q9P1J3 65 aa11.64□□□□□ -0.55
PTPRA-207ENST00000431048 NMUP48645 174 aa11.62□□□□□ -0.55
PTPRA-207ENST00000431048 PRO1933Q9H354 126 aa11.62□□□□□ -0.55
PTPRA-207ENST00000431048 J3QQQ9 107 aa11.61□□□□□ -0.55
PTPRA-207ENST00000431048 SOSTDC1Q6X4U4 206 aa11.61□□□□□ -0.55
PTPRA-207ENST00000431048 H7C2G1 150 aa11.6□□□□□ -0.55
PTPRA-207ENST00000431048 C10orf91Q5T1B1 145 aa11.6□□□□□ -0.55
PTPRA-207ENST00000431048 EIF4EBP3O60516 100 aaPredicted RBP11.58□□□□□ -0.56
PTPRA-207ENST00000431048 CFC1P0CG37 223 aa11.58□□□□□ -0.56
PTPRA-207ENST00000431048 FCGBPQ9Y6R7 5405 aaPredicted RBP11.55□□□□□ -0.56
PTPRA-207ENST00000431048 AKR1D1P51857 326 aa11.54□□□□□ -0.56
PTPRA-207ENST00000431048 ADAMTSL4-AS1Q5T5F5 129 aa11.54□□□□□ -0.56
PTPRA-207ENST00000431048 SMIM29Q86T20 159 aa11.54□□□□□ -0.56
PTPRA-207ENST00000431048 LGALS3P17931 250 aaKnown RBP11.53□□□□□ -0.56
PTPRA-207ENST00000431048 PLNP26678 52 aa11.53□□□□□ -0.56
PTPRA-207ENST00000431048 TAL2Q16559 108 aa11.53□□□□□ -0.56
PTPRA-207ENST00000431048 Q1RN00 199 aa11.53□□□□□ -0.56
PTPRA-207ENST00000431048 HERVK_113P61574 105 aa11.52□□□□□ -0.57
PTPRA-207ENST00000431048 NPC2P61916 151 aa11.52□□□□□ -0.57
PTPRA-207ENST00000431048 TEX49A0A1B0GTD5 131 aa11.51□□□□□ -0.57
PTPRA-207ENST00000431048 H0Y8G0 127 aa11.51□□□□□ -0.57
PTPRA-207ENST00000431048 KRTAP9-8Q9BYQ0 159 aa11.51□□□□□ -0.57
PTPRA-207ENST00000431048 ELOF1P60002 83 aaKnown RBP11.5□□□□□ -0.57
PTPRA-207ENST00000431048 A0A0J9YXY3 114 aa11.49□□□□□ -0.57
PTPRA-207ENST00000431048 HSBP1O75506 76 aa11.49□□□□□ -0.57
PTPRA-207ENST00000431048 OR13C6PQ8NH95 151 aa11.49□□□□□ -0.57
PTPRA-207ENST00000431048 COX7BP24311 80 aa11.48□□□□□ -0.57
PTPRA-207ENST00000431048 Q6Q795 121 aa11.48□□□□□ -0.57
PTPRA-207ENST00000431048 DEFB105AQ8NG35 78 aa11.48□□□□□ -0.57
PTPRA-207ENST00000431048 SPANXCQ9NY87 97 aa11.48□□□□□ -0.57
PTPRA-207ENST00000431048 DPM2O94777 84 aa11.46□□□□□ -0.57
PTPRA-207ENST00000431048 SPANXDQ9BXN6 97 aa11.46□□□□□ -0.57
PTPRA-207ENST00000431048 LEPROTL1O95214 131 aa11.44□□□□□ -0.58
PTPRA-207ENST00000431048 LINC00308Q8TCZ7 52 aa11.44□□□□□ -0.58
PTPRA-207ENST00000431048 TCL1BO95988 128 aa11.42□□□□□ -0.58
PTPRA-207ENST00000431048 IGKCP01834 107 aa11.42□□□□□ -0.58
PTPRA-207ENST00000431048 C6orf99Q4VX62 202 aa11.42□□□□□ -0.58
PTPRA-207ENST00000431048 A0A0G2JQZ4 141 aa11.41□□□□□ -0.58
PTPRA-207ENST00000431048 IGLV5-48A0A075B6I7 105 aa11.4□□□□□ -0.58
PTPRA-207ENST00000431048 TRBV7-6A0A0J9YX20 115 aa11.4□□□□□ -0.58
PTPRA-207ENST00000431048 LITAFQ99732 161 aa11.4□□□□□ -0.58
PTPRA-207ENST00000431048 ATP11AUNQ6ZP68 121 aa11.39□□□□□ -0.59
PTPRA-207ENST00000431048 YPEL4Q96NS1 127 aa11.39□□□□□ -0.59
PTPRA-207ENST00000431048 E9PLD3 99 aa11.38□□□□□ -0.59
PTPRA-207ENST00000431048 Q75L30 129 aa11.38□□□□□ -0.59
PTPRA-207ENST00000431048 LINC00518Q8N0U6 118 aa11.38□□□□□ -0.59
PTPRA-207ENST00000431048 PMCHL2Q9BQD1 86 aa11.38□□□□□ -0.59
PTPRA-207ENST00000431048 TIMM17BO60830 172 aa11.37□□□□□ -0.59
PTPRA-207ENST00000431048 HSPB8Q9UJY1 196 aa11.37□□□□□ -0.59
PTPRA-207ENST00000431048 C20orf202A1L168 122 aa11.33□□□□□ -0.6
PTPRA-207ENST00000431048 LINC00310P59036 64 aa11.33□□□□□ -0.6
PTPRA-207ENST00000431048 A0A1B0GWB2 263 aa11.32□□□□□ -0.6
PTPRA-207ENST00000431048 SNAPINO95295 136 aa11.32□□□□□ -0.6
PTPRA-207ENST00000431048 KRTAP19-1Q8IUB9 90 aa11.32□□□□□ -0.6
PTPRA-207ENST00000431048 APOC3P02656 99 aa11.31□□□□□ -0.6
PTPRA-207ENST00000431048 SERF1AO75920 110 aa11.3□□□□□ -0.6
PTPRA-207ENST00000431048 FABP4P15090 132 aa11.3□□□□□ -0.6
PTPRA-207ENST00000431048 PCP2Q8IVA1 136 aa11.29□□□□□ -0.6
PTPRA-207ENST00000431048 SVBPQ8N300 66 aa11.29□□□□□ -0.6
PTPRA-207ENST00000431048 OBSCN-AS1Q96MR7 158 aa11.27□□□□□ -0.61
PTPRA-207ENST00000431048 MACF1Q9UPN3 7388 aaKnown RBP11.25□□□□□ -0.61
PTPRA-207ENST00000431048 MT2AP02795 61 aa11.25□□□□□ -0.61
PTPRA-207ENST00000431048 SYNE2Q8WXH0 6885 aaKnown RBP11.24□□□□□ -0.61
PTPRA-207ENST00000431048 A4D1N5 150 aa11.24□□□□□ -0.61
PTPRA-207ENST00000431048 LCE2BO14633 110 aa11.24□□□□□ -0.61
PTPRA-207ENST00000431048 NDUFA5Q16718 116 aa11.24□□□□□ -0.61
PTPRA-207ENST00000431048 TRGC2P03986 189 aa11.21□□□□□ -0.61
PTPRA-207ENST00000431048 NHP2Q9NX24 153 aaKnown RBP11.21□□□□□ -0.61
PTPRA-207ENST00000431048 TRBV20-1A0A075B6N2 111 aa11.19□□□□□ -0.62
PTPRA-207ENST00000431048 TRBV7-7A0A0K0K1E9 115 aa11.19□□□□□ -0.62
PTPRA-207ENST00000431048 ZNF815PA8K554 130 aa11.19□□□□□ -0.62
PTPRA-207ENST00000431048 F8WEM9 126 aa11.18□□□□□ -0.62
PTPRA-207ENST00000431048 KRTAP9-3Q9BYQ3 159 aa11.18□□□□□ -0.62
PTPRA-207ENST00000431048 Q6JHZ5 121 aa11.17□□□□□ -0.62
PTPRA-207ENST00000431048 MT1FP04733 61 aa11.15□□□□□ -0.62
PTPRA-207ENST00000431048 A6NDN8 102 aa11.14□□□□□ -0.63
PTPRA-207ENST00000431048 Q96NJ1 140 aa11.14□□□□□ -0.63
PTPRA-207ENST00000431048 C20orf166-AS1Q96NR2 134 aa11.14□□□□□ -0.63
PTPRA-207ENST00000431048 COPS9Q8WXC6 57 aa11.13□□□□□ -0.63
PTPRA-207ENST00000431048 CLEC2BQ92478 149 aa11.13□□□□□ -0.63
PTPRA-207ENST00000431048 SYS1-DBNDD2H3BUS1 97 aa11.12□□□□□ -0.63
PTPRA-207ENST00000431048 TTTY13Q9BZ97 58 aa11.12□□□□□ -0.63
PTPRA-207ENST00000431048 A8MUU9 505 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms