RNA–Protein interactions for RNA: ENST00000430321.5

UBR3-204, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,411 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-204ENST00000430321 RPS29P62273 56 aaKnown RBP3.75□□□□□ -1.81
UBR3-204ENST00000430321 LINC00483Q53H64 154 aa3.74□□□□□ -1.81
UBR3-204ENST00000430321 CSPG4Q6UVK1 2322 aa3.74□□□□□ -1.81
UBR3-204ENST00000430321 FAM218AQ96MZ4 157 aa3.74□□□□□ -1.81
UBR3-204ENST00000430321 MED13LQ71F56 2210 aa3.73□□□□□ -1.81
UBR3-204ENST00000430321 BDP1A6H8Y1 2624 aa3.73□□□□□ -1.81
UBR3-204ENST00000430321 SPRR1BP22528 89 aa3.73□□□□□ -1.81
UBR3-204ENST00000430321 RPS28P62857 69 aaKnown RBP3.73□□□□□ -1.81
UBR3-204ENST00000430321 LINC01600Q96MT4 127 aa3.73□□□□□ -1.81
UBR3-204ENST00000430321 IGF2RP11717 2491 aa3.72□□□□□ -1.81
UBR3-204ENST00000430321 ARHGAP32A7KAX9 2087 aa3.72□□□□□ -1.81
UBR3-204ENST00000430321 COA5Q86WW8 74 aa3.72□□□□□ -1.81
UBR3-204ENST00000430321 ZCCHC13Q8WW36 166 aaKnown RBP3.72□□□□□ -1.81
UBR3-204ENST00000430321 PRR26Q8N8Z3 221 aa3.71□□□□□ -1.81
UBR3-204ENST00000430321 NOTCH3Q9UM47 2321 aa3.71□□□□□ -1.82
UBR3-204ENST00000430321 LRRK2Q5S007 2527 aa3.71□□□□□ -1.82
UBR3-204ENST00000430321 S4R3F8 94 aa3.7□□□□□ -1.82
UBR3-204ENST00000430321 CDC42SE1Q9NRR8 79 aa3.69□□□□□ -1.82
UBR3-204ENST00000430321 IGLV8-61A0A075B6I0 122 aa3.69□□□□□ -1.82
UBR3-204ENST00000430321 WNK1Q9H4A3 2382 aa3.69□□□□□ -1.82
UBR3-204ENST00000430321 DOPEY1Q5JWR5 2465 aa3.69□□□□□ -1.82
UBR3-204ENST00000430321 PSPHP1O15172 72 aa3.69□□□□□ -1.82
UBR3-204ENST00000430321 MIR22HGQ0VDD5 57 aa3.68□□□□□ -1.82
UBR3-204ENST00000430321 Q6ZR54 194 aa3.68□□□□□ -1.82
UBR3-204ENST00000430321 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.68□□□□□ -1.82
UBR3-204ENST00000430321 CAMK2N1Q7Z7J9 78 aa3.68□□□□□ -1.82
UBR3-204ENST00000430321 CCDC168Q8NDH2 2452 aa3.67□□□□□ -1.82
UBR3-204ENST00000430321 SPRR1AP35321 89 aa3.67□□□□□ -1.82
UBR3-204ENST00000430321 SONP18583 2426 aaKnown RBP3.67□□□□□ -1.82
UBR3-204ENST00000430321 KRTAP17-1Q9BYP8 105 aa3.66□□□□□ -1.82
UBR3-204ENST00000430321 PRO0461Q9UI25 63 aa3.65□□□□□ -1.82
UBR3-204ENST00000430321 ZNF462Q96JM2 2506 aa3.65□□□□□ -1.83
UBR3-204ENST00000430321 DSCAML1Q8TD84 2053 aa3.65□□□□□ -1.83
UBR3-204ENST00000430321 KLKP1Q107X0 134 aa3.64□□□□□ -1.83
UBR3-204ENST00000430321 DMAC1Q96GE9 116 aa3.64□□□□□ -1.83
UBR3-204ENST00000430321 A0A1W2PNM2 257 aa3.64□□□□□ -1.83
UBR3-204ENST00000430321 SPINT4Q6UDR6 99 aa3.64□□□□□ -1.83
UBR3-204ENST00000430321 PLXNB1O43157 2135 aa3.63□□□□□ -1.83
UBR3-204ENST00000430321 PRO0628Q9UI54 55 aa3.63□□□□□ -1.83
UBR3-204ENST00000430321 ANKRD17O75179 2603 aaKnown RBP3.63□□□□□ -1.83
UBR3-204ENST00000430321 PLAC4Q8WY50 150 aa3.62□□□□□ -1.83
UBR3-204ENST00000430321 SMCPP49901 116 aaPredicted RBP3.62□□□□□ -1.83
UBR3-204ENST00000430321 KRTAP10-1P60331 282 aa3.62□□□□□ -1.83
UBR3-204ENST00000430321 ANAPC11Q9NYG5 84 aa3.61□□□□□ -1.83
UBR3-204ENST00000430321 ASB16-AS1Q495Z4 193 aa3.61□□□□□ -1.83
UBR3-204ENST00000430321 Q8N1X5 172 aa3.61□□□□□ -1.83
UBR3-204ENST00000430321 MUC4Q99102 2169 aa3.61□□□□□ -1.83
UBR3-204ENST00000430321 TLN1Q9Y490 2541 aaKnown RBP3.61□□□□□ -1.83
UBR3-204ENST00000430321 H7BZZ5 65 aa3.59□□□□□ -1.83
UBR3-204ENST00000430321 LINC01554Q52M75 96 aa3.59□□□□□ -1.83
UBR3-204ENST00000430321 LUZP6Q538Z0 58 aa3.59□□□□□ -1.84
UBR3-204ENST00000430321 A0A1B0GU33 70 aa3.58□□□□□ -1.84
UBR3-204ENST00000430321 R4GN34 69 aa3.57□□□□□ -1.84
UBR3-204ENST00000430321 C2CD3Q4AC94 2353 aa3.57□□□□□ -1.84
UBR3-204ENST00000430321 Q5XG85 94 aa3.57□□□□□ -1.84
UBR3-204ENST00000430321 SPINK7P58062 85 aa3.56□□□□□ -1.84
UBR3-204ENST00000430321 F8P00451 2351 aa3.56□□□□□ -1.84
UBR3-204ENST00000430321 CR1P17927 2039 aa3.56□□□□□ -1.84
UBR3-204ENST00000430321 MMP24-AS1A0A0U1RRL7 71 aa3.55□□□□□ -1.84
UBR3-204ENST00000430321 Q1T7F1 81 aa3.55□□□□□ -1.84
UBR3-204ENST00000430321 KRTAP10-2P60368 255 aa3.54□□□□□ -1.84
UBR3-204ENST00000430321 KRTAP26-1Q6PEX3 210 aa3.54□□□□□ -1.84
UBR3-204ENST00000430321 ABCA12Q86UK0 2595 aa3.54□□□□□ -1.84
UBR3-204ENST00000430321 PKD1L2Q7Z442 2459 aa3.54□□□□□ -1.84
UBR3-204ENST00000430321 Q75L30 129 aa3.53□□□□□ -1.84
UBR3-204ENST00000430321 LINC00472Q9H8W2 130 aa3.53□□□□□ -1.84
UBR3-204ENST00000430321 Q5W150 140 aa3.52□□□□□ -1.85
UBR3-204ENST00000430321 H1FX-AS1Q4G0G2 97 aa3.52□□□□□ -1.85
UBR3-204ENST00000430321 LCA10Q71F78 164 aa3.52□□□□□ -1.85
UBR3-204ENST00000430321 ANKRD11Q6UB99 2663 aaPredicted RBP3.52□□□□□ -1.85
UBR3-204ENST00000430321 KRTAP1-5Q9BYS1 174 aa3.51□□□□□ -1.85
UBR3-204ENST00000430321 A0A0D9SG42 100 aa3.51□□□□□ -1.85
UBR3-204ENST00000430321 OCR1Q9BZK8 76 aa3.5□□□□□ -1.85
UBR3-204ENST00000430321 JMJD1CQ15652 2540 aa3.5□□□□□ -1.85
UBR3-204ENST00000430321 PIEZO2Q9H5I5 2752 aa3.5□□□□□ -1.85
UBR3-204ENST00000430321 C4orf26Q17RF5 130 aa3.49□□□□□ -1.85
UBR3-204ENST00000430321 CHD8Q9HCK8 2581 aa3.49□□□□□ -1.85
UBR3-204ENST00000430321 Q6ZRN7 208 aaPredicted RBP3.48□□□□□ -1.85
UBR3-204ENST00000430321 MYO18BQ8IUG5 2567 aa3.48□□□□□ -1.85
UBR3-204ENST00000430321 RPL37P61927 97 aaKnown RBP3.48□□□□□ -1.85
UBR3-204ENST00000430321 LINC01558Q9Y6Z2 57 aa3.48□□□□□ -1.85
UBR3-204ENST00000430321 ZFYVE26Q68DK2 2539 aa3.48□□□□□ -1.85
UBR3-204ENST00000430321 MYO9AB2RTY4 2548 aa3.47□□□□□ -1.85
UBR3-204ENST00000430321 M0QZ58 72 aa3.46□□□□□ -1.85
UBR3-204ENST00000430321 EIF4EBP3O60516 100 aaPredicted RBP3.46□□□□□ -1.85
UBR3-204ENST00000430321 FN1P02751 2386 aaKnown RBP3.46□□□□□ -1.86
UBR3-204ENST00000430321 A0A0G2JQZ4 141 aa3.46□□□□□ -1.86
UBR3-204ENST00000430321 NOTCH2NLQ7Z3S9 236 aa3.45□□□□□ -1.86
UBR3-204ENST00000430321 USP9XQ93008 2570 aaPredicted RBP3.44□□□□□ -1.86
UBR3-204ENST00000430321 FASNP49327 2511 aaKnown RBP3.44□□□□□ -1.86
UBR3-204ENST00000430321 KTN1-AS1Q86SY8 53 aa3.43□□□□□ -1.86
UBR3-204ENST00000430321 MTORP42345 2549 aa3.43□□□□□ -1.86
UBR3-204ENST00000430321 KRTAP4-16G5E9R7 235 aaPredicted RBP3.43□□□□□ -1.86
UBR3-204ENST00000430321 PANO1I0J062 215 aa3.41□□□□□ -1.86
UBR3-204ENST00000430321 TLN2Q9Y4G6 2542 aa3.4□□□□□ -1.86
UBR3-204ENST00000430321 Q8N9P0 234 aaPredicted RBP3.4□□□□□ -1.87
UBR3-204ENST00000430321 ADM2Q7Z4H4 148 aa3.4□□□□□ -1.87
UBR3-204ENST00000430321 KRTAP29-1A8MX34 341 aaPredicted RBP3.39□□□□□ -1.87
UBR3-204ENST00000430321 CEP295Q9C0D2 2601 aa3.39□□□□□ -1.87
UBR3-204ENST00000430321 ROMO1P60602 79 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms