RNA–Protein interactions for RNA: ENST00000426870.1

LINC01953-201, Transcript of long intergenic non-protein coding RNA 1953, humanhuman

TSL 5 BASIC

Gene LINC01953, Length 717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01953-201ENST00000426870 SMIM11BQ8TCY0 68 aa0.9□□□□□ -2.27
LINC01953-201ENST00000426870 DUOX1Q9NRD9 1551 aa0.9□□□□□ -2.27
LINC01953-201ENST00000426870 INTS1Q8N201 2190 aaKnown RBP0.9□□□□□ -2.27
LINC01953-201ENST00000426870 RTTNQ86VV8 2226 aa0.89□□□□□ -2.27
LINC01953-201ENST00000426870 LINC01546A6NGU7 62 aa0.89□□□□□ -2.27
LINC01953-201ENST00000426870 CPSF4LA6NMK7 179 aaKnown RBP0.89□□□□□ -2.27
LINC01953-201ENST00000426870 CRIP1P50238 77 aa0.89□□□□□ -2.27
LINC01953-201ENST00000426870 TFF3Q07654 80 aa0.89□□□□□ -2.27
LINC01953-201ENST00000426870 PLAC4Q8WY50 150 aa0.89□□□□□ -2.27
LINC01953-201ENST00000426870 KCNQ1DNQ9H478 68 aa0.89□□□□□ -2.27
LINC01953-201ENST00000426870 BRWD1Q9NSI6 2320 aa0.89□□□□□ -2.27
LINC01953-201ENST00000426870 LMO7Q8WWI1 1683 aa0.88□□□□□ -2.27
LINC01953-201ENST00000426870 SPTY2D1-AS1A0A0U1RR47 76 aa0.88□□□□□ -2.27
LINC01953-201ENST00000426870 RPL38P63173 70 aaKnown RBP0.88□□□□□ -2.27
LINC01953-201ENST00000426870 PRO3102Q9H379 93 aa0.88□□□□□ -2.27
LINC01953-201ENST00000426870 A0A0G2JMZ2 1700 aa0.88□□□□□ -2.27
LINC01953-201ENST00000426870 TNRC6CQ9HCJ0 1690 aaKnown RBP0.88□□□□□ -2.27
LINC01953-201ENST00000426870 LRRC37AA6NMS7 1700 aa0.87□□□□□ -2.27
LINC01953-201ENST00000426870 DEFB114Q30KQ6 69 aa0.87□□□□□ -2.27
LINC01953-201ENST00000426870 ALPK2Q86TB3 2170 aa0.87□□□□□ -2.27
LINC01953-201ENST00000426870 SPAG17Q6Q759 2223 aa0.87□□□□□ -2.27
LINC01953-201ENST00000426870 FREM1Q5H8C1 2179 aa0.86□□□□□ -2.27
LINC01953-201ENST00000426870 H0YGX0 51 aa0.86□□□□□ -2.27
LINC01953-201ENST00000426870 LINC00158P58513 81 aa0.86□□□□□ -2.27
LINC01953-201ENST00000426870 UBE2DNLQ8IWF7 75 aa0.86□□□□□ -2.27
LINC01953-201ENST00000426870 CDKN2A-AS1Q9UH64 79 aa0.86□□□□□ -2.27
LINC01953-201ENST00000426870 MED13LQ71F56 2210 aa0.85□□□□□ -2.27
LINC01953-201ENST00000426870 PIN1P1O15428 100 aa0.85□□□□□ -2.27
LINC01953-201ENST00000426870 RPL37P61927 97 aaKnown RBP0.85□□□□□ -2.27
LINC01953-201ENST00000426870 C10orf99Q6UWK7 81 aa0.85□□□□□ -2.27
LINC01953-201ENST00000426870 LINC00308Q8TCZ7 52 aa0.85□□□□□ -2.27
LINC01953-201ENST00000426870 TMEM167BQ9NRX6 74 aa0.85□□□□□ -2.27
LINC01953-201ENST00000426870 F5P12259 2224 aa0.84□□□□□ -2.27
LINC01953-201ENST00000426870 DEFB131BA0A096LNP1 70 aa0.84□□□□□ -2.27
LINC01953-201ENST00000426870 IAPPP10997 89 aa0.84□□□□□ -2.27
LINC01953-201ENST00000426870 LELP1Q5T871 98 aa0.84□□□□□ -2.27
LINC01953-201ENST00000426870 UNQ6190/PRO20217Q6UXQ8 127 aa0.84□□□□□ -2.27
LINC01953-201ENST00000426870 C10orf95Q9H7T3 257 aa0.84□□□□□ -2.27
LINC01953-201ENST00000426870 MRPL33O75394 65 aaKnown RBP0.83□□□□□ -2.28
LINC01953-201ENST00000426870 SPINK13Q1W4C9 94 aa0.83□□□□□ -2.28
LINC01953-201ENST00000426870 LINC00575Q6W349 94 aa0.83□□□□□ -2.28
LINC01953-201ENST00000426870 Q8IZM0 81 aa0.83□□□□□ -2.28
LINC01953-201ENST00000426870 MRPL34Q9BQ48 92 aaKnown RBP0.83□□□□□ -2.28
LINC01953-201ENST00000426870 TTTY10Q9BZA0 68 aa0.83□□□□□ -2.28
LINC01953-201ENST00000426870 ABCA1O95477 2261 aa0.83□□□□□ -2.28
LINC01953-201ENST00000426870 CADP27708 2225 aa0.83□□□□□ -2.28
LINC01953-201ENST00000426870 CACNA1CQ13936 2221 aa0.83□□□□□ -2.28
LINC01953-201ENST00000426870 AHNAK2Q8IVF2 5795 aa0.82□□□□□ -2.28
LINC01953-201ENST00000426870 TECTAO75443 2155 aa0.82□□□□□ -2.28
LINC01953-201ENST00000426870 I3L2K1 104 aa0.82□□□□□ -2.28
LINC01953-201ENST00000426870 SMIM2Q9BVW6 85 aa0.82□□□□□ -2.28
LINC01953-201ENST00000426870 H0YAA0 97 aa0.81□□□□□ -2.28
LINC01953-201ENST00000426870 K7EQZ3 153 aa0.81□□□□□ -2.28
LINC01953-201ENST00000426870 NDUFA1O15239 70 aa0.81□□□□□ -2.28
LINC01953-201ENST00000426870 MINOS1Q5TGZ0 78 aa0.81□□□□□ -2.28
LINC01953-201ENST00000426870 RPS27LQ71UM5 84 aaKnown RBP0.81□□□□□ -2.28
LINC01953-201ENST00000426870 TP53AIP1Q9HCN2 124 aa0.81□□□□□ -2.28
LINC01953-201ENST00000426870 TNCP24821 2201 aa0.8□□□□□ -2.28
LINC01953-201ENST00000426870 WFDC13Q8IUB5 93 aa0.8□□□□□ -2.28
LINC01953-201ENST00000426870 C6orf48Q9UBA6 75 aa0.79□□□□□ -2.28
LINC01953-201ENST00000426870 BPTFQ12830 3046 aa0.79□□□□□ -2.28
LINC01953-201ENST00000426870 H3BSH0 61 aa0.78□□□□□ -2.28
LINC01953-201ENST00000426870 COX6A2Q02221 97 aa0.78□□□□□ -2.28
LINC01953-201ENST00000426870 PIGYQ3MUY2 71 aa0.78□□□□□ -2.28
LINC01953-201ENST00000426870 WFDC10BQ8IUB3 73 aa0.78□□□□□ -2.28
LINC01953-201ENST00000426870 DEFB123Q8N688 67 aa0.78□□□□□ -2.28
LINC01953-201ENST00000426870 ARHGAP5-AS1Q96IT6 56 aa0.78□□□□□ -2.28
LINC01953-201ENST00000426870 USMG5Q96IX5 58 aa0.78□□□□□ -2.28
LINC01953-201ENST00000426870 PRO0255Q9UI72 69 aa0.78□□□□□ -2.28
LINC01953-201ENST00000426870 APLNQ9ULZ1 77 aa0.78□□□□□ -2.28
LINC01953-201ENST00000426870 URB1O60287 2271 aaKnown RBP0.77□□□□□ -2.29
LINC01953-201ENST00000426870 K7EIL1 84 aa0.77□□□□□ -2.29
LINC01953-201ENST00000426870 H1FX-AS1Q4G0G2 97 aa0.77□□□□□ -2.29
LINC01953-201ENST00000426870 CNFNQ9BYD5 112 aa0.77□□□□□ -2.29
LINC01953-201ENST00000426870 KAAG1Q9UBP8 84 aa0.77□□□□□ -2.29
LINC01953-201ENST00000426870 ASXL3Q9C0F0 2248 aa0.77□□□□□ -2.29
LINC01953-201ENST00000426870 ZNF469Q96JG9 3925 aaPredicted RBP0.77□□□□□ -2.29
LINC01953-201ENST00000426870 ROS1P08922 2347 aa0.76□□□□□ -2.29
LINC01953-201ENST00000426870 LYNX1G3V0Z9 82 aa0.76□□□□□ -2.29
LINC01953-201ENST00000426870 CCL22O00626 93 aa0.76□□□□□ -2.29
LINC01953-201ENST00000426870 DEFB130BP0DP73 79 aa0.76□□□□□ -2.29
LINC01953-201ENST00000426870 DEFB130AP0DP74 79 aa0.76□□□□□ -2.29
LINC01953-201ENST00000426870 RPS27P42677 84 aaKnown RBP0.76□□□□□ -2.29
LINC01953-201ENST00000426870 RPL39P62891 51 aaKnown RBP0.76□□□□□ -2.29
LINC01953-201ENST00000426870 KLK9Q2XQG4 91 aa0.76□□□□□ -2.29
LINC01953-201ENST00000426870 SPRR1AP35321 89 aa0.75□□□□□ -2.29
LINC01953-201ENST00000426870 SPINK9Q5DT21 86 aa0.75□□□□□ -2.29
LINC01953-201ENST00000426870 COX6B2Q6YFQ2 88 aa0.75□□□□□ -2.29
LINC01953-201ENST00000426870 DEFB105AQ8NG35 78 aa0.75□□□□□ -2.29
LINC01953-201ENST00000426870 LEAP2Q969E1 77 aa0.75□□□□□ -2.29
LINC01953-201ENST00000426870 RPL39LQ96EH5 51 aaKnown RBP0.75□□□□□ -2.29
LINC01953-201ENST00000426870 CACNA1BQ00975 2339 aa0.75□□□□□ -2.29
LINC01953-201ENST00000426870 ALMS1Q8TCU4 4167 aa0.74□□□□□ -2.29
LINC01953-201ENST00000426870 KNTC1P50748 2209 aa0.73□□□□□ -2.29
LINC01953-201ENST00000426870 ANKRD17O75179 2603 aaKnown RBP0.73□□□□□ -2.29
LINC01953-201ENST00000426870 GOLGA4Q13439 2230 aaKnown RBP0.73□□□□□ -2.29
LINC01953-201ENST00000426870 SPRR1BP22528 89 aa0.72□□□□□ -2.29
LINC01953-201ENST00000426870 PRLHP81277 87 aa0.72□□□□□ -2.29
LINC01953-201ENST00000426870 LINC01590Q5TEZ4 76 aa0.72□□□□□ -2.29
LINC01953-201ENST00000426870 CACNA1EQ15878 2313 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms