RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 A0A087WTM6 91 aa11.75□□□□□ -0.53
ARHGEF28-203ENST00000426542 SMR3BP02814 79 aaPredicted RBP11.75□□□□□ -0.53
ARHGEF28-203ENST00000426542 CYP4F30PQ9H0H9 118 aa11.75□□□□□ -0.53
ARHGEF28-203ENST00000426542 ANAPC11Q9NYG5 84 aa11.75□□□□□ -0.53
ARHGEF28-203ENST00000426542 GIG44P09565 113 aaPredicted RBP11.73□□□□□ -0.53
ARHGEF28-203ENST00000426542 MIR22HGQ0VDD5 57 aa11.72□□□□□ -0.53
ARHGEF28-203ENST00000426542 ANKRD11Q6UB99 2663 aaPredicted RBP11.7□□□□□ -0.54
ARHGEF28-203ENST00000426542 SETD2Q9BYW2 2564 aaPredicted RBP11.7□□□□□ -0.54
ARHGEF28-203ENST00000426542 TLX1NBP0CAT3 122 aa11.69□□□□□ -0.54
ARHGEF28-203ENST00000426542 CRIPTQ9P021 101 aa11.69□□□□□ -0.54
ARHGEF28-203ENST00000426542 PLA2G2DQ9UNK4 145 aa11.69□□□□□ -0.54
ARHGEF28-203ENST00000426542 C9orf163Q8N9P6 203 aa11.67□□□□□ -0.54
ARHGEF28-203ENST00000426542 A0A096LNT2 108 aa11.67□□□□□ -0.54
ARHGEF28-203ENST00000426542 IGLV7-43P04211 117 aa11.66□□□□□ -0.54
ARHGEF28-203ENST00000426542 LINC00612Q8N6U2 182 aa11.66□□□□□ -0.54
ARHGEF28-203ENST00000426542 ZNF462Q96JM2 2506 aa11.65□□□□□ -0.54
ARHGEF28-203ENST00000426542 PKD1L2Q7Z442 2459 aa11.65□□□□□ -0.54
ARHGEF28-203ENST00000426542 IGLV5-37A0A075B6J1 123 aa11.64□□□□□ -0.55
ARHGEF28-203ENST00000426542 KLKP1Q107X0 134 aa11.63□□□□□ -0.55
ARHGEF28-203ENST00000426542 CASC10Q5T4H9 136 aa11.63□□□□□ -0.55
ARHGEF28-203ENST00000426542 PSORS1C2Q9UIG4 136 aa11.63□□□□□ -0.55
ARHGEF28-203ENST00000426542 USP9YO00507 2555 aaPredicted RBP11.62□□□□□ -0.55
ARHGEF28-203ENST00000426542 ANKRD17O75179 2603 aaKnown RBP11.61□□□□□ -0.55
ARHGEF28-203ENST00000426542 SPRR4Q96PI1 79 aa11.59□□□□□ -0.55
ARHGEF28-203ENST00000426542 CEP295Q9C0D2 2601 aa11.59□□□□□ -0.55
ARHGEF28-203ENST00000426542 RBM12B-AS1Q9P1G2 102 aa11.58□□□□□ -0.56
ARHGEF28-203ENST00000426542 LINC01554Q52M75 96 aa11.56□□□□□ -0.56
ARHGEF28-203ENST00000426542 CENPFP49454 3210 aa11.55□□□□□ -0.56
ARHGEF28-203ENST00000426542 H7BZZ5 65 aa11.54□□□□□ -0.56
ARHGEF28-203ENST00000426542 Q8N1X5 172 aa11.54□□□□□ -0.56
ARHGEF28-203ENST00000426542 A0A0D9SG42 100 aa11.54□□□□□ -0.56
ARHGEF28-203ENST00000426542 A0A1W2PNM2 257 aa11.54□□□□□ -0.56
ARHGEF28-203ENST00000426542 CNBPP62633 177 aaKnown RBP11.53□□□□□ -0.56
ARHGEF28-203ENST00000426542 ZNF575Q86XF7 245 aa11.53□□□□□ -0.56
ARHGEF28-203ENST00000426542 LINC00336Q6ZUF6 198 aa11.52□□□□□ -0.57
ARHGEF28-203ENST00000426542 IGLV5-48A0A075B6I7 105 aa11.51□□□□□ -0.57
ARHGEF28-203ENST00000426542 MTORP42345 2549 aa11.5□□□□□ -0.57
ARHGEF28-203ENST00000426542 FAM104AQ969W3 186 aa11.5□□□□□ -0.57
ARHGEF28-203ENST00000426542 CHD8Q9HCK8 2581 aa11.48□□□□□ -0.57
ARHGEF28-203ENST00000426542 SPTBN4Q9H254 2564 aa11.47□□□□□ -0.57
ARHGEF28-203ENST00000426542 POLQO75417 2590 aa11.46□□□□□ -0.58
ARHGEF28-203ENST00000426542 CDC42SE1Q9NRR8 79 aa11.44□□□□□ -0.58
ARHGEF28-203ENST00000426542 KRTAP1-3Q8IUG1 177 aa11.43□□□□□ -0.58
ARHGEF28-203ENST00000426542 SPANXA2-OT1Q8N9U9 137 aa11.42□□□□□ -0.58
ARHGEF28-203ENST00000426542 ACANP16112 2415 aa11.42□□□□□ -0.58
ARHGEF28-203ENST00000426542 F8P00451 2351 aa11.4□□□□□ -0.58
ARHGEF28-203ENST00000426542 KTN1-AS1Q86SY8 53 aa11.38□□□□□ -0.59
ARHGEF28-203ENST00000426542 KRTAP1-1Q07627 177 aa11.36□□□□□ -0.59
ARHGEF28-203ENST00000426542 TNP2Q05952 138 aa11.34□□□□□ -0.59
ARHGEF28-203ENST00000426542 LCA10Q71F78 164 aa11.33□□□□□ -0.59
ARHGEF28-203ENST00000426542 CD164Q04900 197 aa11.32□□□□□ -0.6
ARHGEF28-203ENST00000426542 Q6ZSA8 131 aa11.32□□□□□ -0.6
ARHGEF28-203ENST00000426542 PRR26Q8N8Z3 221 aa11.29□□□□□ -0.6
ARHGEF28-203ENST00000426542 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.27□□□□□ -0.6
ARHGEF28-203ENST00000426542 FASNP49327 2511 aaKnown RBP11.26□□□□□ -0.61
ARHGEF28-203ENST00000426542 OCR1Q9BZK8 76 aa11.26□□□□□ -0.61
ARHGEF28-203ENST00000426542 IGLV7-46A0A075B6I9 117 aa11.25□□□□□ -0.61
ARHGEF28-203ENST00000426542 HRES1P13985 223 aa11.19□□□□□ -0.62
ARHGEF28-203ENST00000426542 CAMK2N1Q7Z7J9 78 aa11.17□□□□□ -0.62
ARHGEF28-203ENST00000426542 Q1T7F1 81 aa11.17□□□□□ -0.62
ARHGEF28-203ENST00000426542 LUZP6Q538Z0 58 aa11.16□□□□□ -0.62
ARHGEF28-203ENST00000426542 A0A1B0GU33 70 aa11.16□□□□□ -0.62
ARHGEF28-203ENST00000426542 CR1P17927 2039 aa11.15□□□□□ -0.62
ARHGEF28-203ENST00000426542 M0R2T5 61 aa11.15□□□□□ -0.62
ARHGEF28-203ENST00000426542 FAM229BQ4G0N7 80 aa11.1□□□□□ -0.63
ARHGEF28-203ENST00000426542 GOLGB1Q14789 3259 aaKnown RBP11.09□□□□□ -0.63
ARHGEF28-203ENST00000426542 ZCCHC13Q8WW36 166 aaKnown RBP11.08□□□□□ -0.64
ARHGEF28-203ENST00000426542 MMP24-AS1A0A0U1RRL7 71 aa11.07□□□□□ -0.64
ARHGEF28-203ENST00000426542 PLAC8Q9NZF1 115 aa11.07□□□□□ -0.64
ARHGEF28-203ENST00000426542 LINC00483Q53H64 154 aa11.05□□□□□ -0.64
ARHGEF28-203ENST00000426542 S4R3F8 94 aa11.05□□□□□ -0.64
ARHGEF28-203ENST00000426542 Q8N9P0 234 aaPredicted RBP11.04□□□□□ -0.64
ARHGEF28-203ENST00000426542 Q75L30 129 aa11.04□□□□□ -0.64
ARHGEF28-203ENST00000426542 Q8NDZ9 215 aa11.02□□□□□ -0.65
ARHGEF28-203ENST00000426542 CSAG1Q6PB30 78 aa10.99□□□□□ -0.65
ARHGEF28-203ENST00000426542 SPRR1AP35321 89 aa10.97□□□□□ -0.65
ARHGEF28-203ENST00000426542 WIPF1O43516 503 aa10.96□□□□□ -0.65
ARHGEF28-203ENST00000426542 LINC01558Q9Y6Z2 57 aa10.96□□□□□ -0.66
ARHGEF28-203ENST00000426542 DMAC1Q96GE9 116 aa10.96□□□□□ -0.66
ARHGEF28-203ENST00000426542 Q5W150 140 aa10.95□□□□□ -0.66
ARHGEF28-203ENST00000426542 USP24Q9UPU5 2620 aa10.94□□□□□ -0.66
ARHGEF28-203ENST00000426542 HECTD1Q9ULT8 2610 aa10.9□□□□□ -0.66
ARHGEF28-203ENST00000426542 EPG5Q9HCE0 2579 aa10.89□□□□□ -0.67
ARHGEF28-203ENST00000426542 MGAM2Q2M2H8 2515 aa10.89□□□□□ -0.67
ARHGEF28-203ENST00000426542 LINC00472Q9H8W2 130 aa10.88□□□□□ -0.67
ARHGEF28-203ENST00000426542 SPINK7P58062 85 aa10.88□□□□□ -0.67
ARHGEF28-203ENST00000426542 BPTFQ12830 3046 aa10.86□□□□□ -0.67
ARHGEF28-203ENST00000426542 SPRR1BP22528 89 aa10.85□□□□□ -0.67
ARHGEF28-203ENST00000426542 PRAC1Q96KF2 57 aa10.84□□□□□ -0.67
ARHGEF28-203ENST00000426542 CYSTM1Q9H1C7 97 aa10.83□□□□□ -0.68
ARHGEF28-203ENST00000426542 Q5XG85 94 aa10.83□□□□□ -0.68
ARHGEF28-203ENST00000426542 R4GN34 69 aa10.83□□□□□ -0.68
ARHGEF28-203ENST00000426542 KRTAP1-5Q9BYS1 174 aa10.82□□□□□ -0.68
ARHGEF28-203ENST00000426542 Q5VSD8 79 aa10.81□□□□□ -0.68
ARHGEF28-203ENST00000426542 DNAH12Q6ZR08 3092 aa10.79□□□□□ -0.68
ARHGEF28-203ENST00000426542 Q5VV11 94 aa10.79□□□□□ -0.68
ARHGEF28-203ENST00000426542 FP248Q71RG6 208 aaPredicted RBP10.78□□□□□ -0.68
ARHGEF28-203ENST00000426542 FLNBO75369 2602 aaKnown RBP10.78□□□□□ -0.68
ARHGEF28-203ENST00000426542 SEC61BP60468 96 aaKnown RBP10.77□□□□□ -0.68
ARHGEF28-203ENST00000426542 KRTAP26-1Q6PEX3 210 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms