RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 FGF23Q9GZV9 251 aaPredicted RBP3.7□□□□□ -1.82
ECHDC1-206ENST00000417628 DSCAML1Q8TD84 2053 aa3.7□□□□□ -1.82
ECHDC1-206ENST00000417628 A8MUN3 132 aa3.69□□□□□ -1.82
ECHDC1-206ENST00000417628 H0YGX0 51 aa3.69□□□□□ -1.82
ECHDC1-206ENST00000417628 H3BRN7 92 aa3.69□□□□□ -1.82
ECHDC1-206ENST00000417628 H7C2G1 150 aa3.69□□□□□ -1.82
ECHDC1-206ENST00000417628 CIRBPQ14011 172 aaKnown RBP3.69□□□□□ -1.82
ECHDC1-206ENST00000417628 NDUFA4L2Q9NRX3 87 aa3.69□□□□□ -1.82
ECHDC1-206ENST00000417628 F6UB75 175 aa3.68□□□□□ -1.82
ECHDC1-206ENST00000417628 FAM229BQ4G0N7 80 aa3.68□□□□□ -1.82
ECHDC1-206ENST00000417628 ADAMTSL4-AS1Q5T5F5 129 aa3.68□□□□□ -1.82
ECHDC1-206ENST00000417628 LCE1AQ5T7P2 110 aa3.68□□□□□ -1.82
ECHDC1-206ENST00000417628 SPANXN1Q5VSR9 72 aa3.68□□□□□ -1.82
ECHDC1-206ENST00000417628 Q6ZRP5 223 aa3.68□□□□□ -1.82
ECHDC1-206ENST00000417628 TMEM254Q8TBM7 123 aa3.68□□□□□ -1.82
ECHDC1-206ENST00000417628 TMEM167AQ8TBQ9 72 aa3.68□□□□□ -1.82
ECHDC1-206ENST00000417628 LINC00167Q96N53 147 aa3.68□□□□□ -1.82
ECHDC1-206ENST00000417628 MRPL36Q9P0J6 103 aaKnown RBP3.68□□□□□ -1.82
ECHDC1-206ENST00000417628 TRAV23DV6A0A075B6W5 121 aa3.67□□□□□ -1.82
ECHDC1-206ENST00000417628 TRBV6-5A0A0K0K1A5 114 aa3.67□□□□□ -1.82
ECHDC1-206ENST00000417628 SAA1P0DJI8 122 aaPredicted RBP3.67□□□□□ -1.82
ECHDC1-206ENST00000417628 MT1HL1P0DM35 61 aa3.67□□□□□ -1.82
ECHDC1-206ENST00000417628 SYCNQ0VAF6 134 aa3.67□□□□□ -1.82
ECHDC1-206ENST00000417628 DEFB114Q30KQ6 69 aa3.67□□□□□ -1.82
ECHDC1-206ENST00000417628 RMI2Q96E14 147 aa3.67□□□□□ -1.82
ECHDC1-206ENST00000417628 LIMD2Q9BT23 127 aa3.67□□□□□ -1.82
ECHDC1-206ENST00000417628 LENEPQ9Y5L5 61 aa3.67□□□□□ -1.82
ECHDC1-206ENST00000417628 KLLNB2CW77 178 aa3.66□□□□□ -1.82
ECHDC1-206ENST00000417628 H3BQ85 93 aa3.66□□□□□ -1.82
ECHDC1-206ENST00000417628 PDE6GP18545 87 aa3.66□□□□□ -1.82
ECHDC1-206ENST00000417628 C15orf32Q32M92 178 aa3.66□□□□□ -1.82
ECHDC1-206ENST00000417628 NOTCH2NLQ7Z3S9 236 aa3.66□□□□□ -1.82
ECHDC1-206ENST00000417628 IGHV3-72A0A0B4J1Y9 119 aa3.65□□□□□ -1.83
ECHDC1-206ENST00000417628 TRAV22A0A0B4J277 110 aa3.65□□□□□ -1.83
ECHDC1-206ENST00000417628 IGHV7-4-1A0A0J9YVY3 117 aa3.65□□□□□ -1.83
ECHDC1-206ENST00000417628 H0Y9J4 135 aa3.65□□□□□ -1.83
ECHDC1-206ENST00000417628 NDUFA1O15239 70 aa3.65□□□□□ -1.83
ECHDC1-206ENST00000417628 GNRH2O43555 120 aa3.65□□□□□ -1.83
ECHDC1-206ENST00000417628 CTSGP08311 255 aa3.65□□□□□ -1.83
ECHDC1-206ENST00000417628 SOSTDC1Q6X4U4 206 aa3.65□□□□□ -1.83
ECHDC1-206ENST00000417628 LINC00269Q8N2A0 174 aa3.65□□□□□ -1.83
ECHDC1-206ENST00000417628 Q8NAQ8 132 aa3.65□□□□□ -1.83
ECHDC1-206ENST00000417628 LINC00574Q9H8X3 128 aa3.65□□□□□ -1.83
ECHDC1-206ENST00000417628 LRP1Q07954 4544 aaKnown RBP3.65□□□□□ -1.83
ECHDC1-206ENST00000417628 LOC110117498A0A087WWA1 95 aa3.64□□□□□ -1.83
ECHDC1-206ENST00000417628 IGHV3OR16-9A0A0B4J2B5 98 aa3.64□□□□□ -1.83
ECHDC1-206ENST00000417628 IGHV3-30-3P0DP02 117 aa3.64□□□□□ -1.83
ECHDC1-206ENST00000417628 POLR2KP53803 58 aaKnown RBP3.64□□□□□ -1.83
ECHDC1-206ENST00000417628 ELOF1P60002 83 aaKnown RBP3.64□□□□□ -1.83
ECHDC1-206ENST00000417628 NREPQ16612 68 aa3.64□□□□□ -1.83
ECHDC1-206ENST00000417628 LINC01554Q52M75 96 aa3.64□□□□□ -1.83
ECHDC1-206ENST00000417628 CDC42SE1Q9NRR8 79 aa3.64□□□□□ -1.83
ECHDC1-206ENST00000417628 NDUFA12Q9UI09 145 aa3.64□□□□□ -1.83
ECHDC1-206ENST00000417628 TRBV6-8A0A0A6YYG3 113 aa3.63□□□□□ -1.83
ECHDC1-206ENST00000417628 IGHV7-81A0A0B4J1V7 117 aa3.63□□□□□ -1.83
ECHDC1-206ENST00000417628 IGHV1-3A0A0C4DH29 117 aa3.63□□□□□ -1.83
ECHDC1-206ENST00000417628 TRGV3P03979 118 aa3.63□□□□□ -1.83
ECHDC1-206ENST00000417628 S100A4P26447 101 aaKnown RBP3.63□□□□□ -1.83
ECHDC1-206ENST00000417628 Q5VV11 94 aa3.63□□□□□ -1.83
ECHDC1-206ENST00000417628 ENHOQ6UWT2 76 aa3.63□□□□□ -1.83
ECHDC1-206ENST00000417628 CLEC19AQ6UXS0 136 aa3.63□□□□□ -1.83
ECHDC1-206ENST00000417628 C14orf132Q9NPU4 83 aa3.63□□□□□ -1.83
ECHDC1-206ENST00000417628 SNURFQ9Y675 71 aa3.63□□□□□ -1.83
ECHDC1-206ENST00000417628 KIF25-AS1Q9Y6Z4 181 aa3.63□□□□□ -1.83
ECHDC1-206ENST00000417628 A0A087WYN8 130 aa3.62□□□□□ -1.83
ECHDC1-206ENST00000417628 LOC101927531A0A1B0GV80 90 aa3.62□□□□□ -1.83
ECHDC1-206ENST00000417628 MP68P56378 58 aa3.62□□□□□ -1.83
ECHDC1-206ENST00000417628 KRTAP10-4P60372 401 aaPredicted RBP3.62□□□□□ -1.83
ECHDC1-206ENST00000417628 GPHB5Q86YW7 130 aa3.62□□□□□ -1.83
ECHDC1-206ENST00000417628 LINC00308Q8TCZ7 52 aa3.62□□□□□ -1.83
ECHDC1-206ENST00000417628 CELA1Q9UNI1 258 aa3.62□□□□□ -1.83
ECHDC1-206ENST00000417628 PSCAO43653 123 aa3.61□□□□□ -1.83
ECHDC1-206ENST00000417628 CRPP02741 224 aa3.61□□□□□ -1.83
ECHDC1-206ENST00000417628 SAA2P0DJI9 122 aaPredicted RBP3.61□□□□□ -1.83
ECHDC1-206ENST00000417628 CGB3P0DN86 165 aa3.61□□□□□ -1.83
ECHDC1-206ENST00000417628 CGB7P0DN87 165 aa3.61□□□□□ -1.83
ECHDC1-206ENST00000417628 NDPQ00604 133 aa3.61□□□□□ -1.83
ECHDC1-206ENST00000417628 ZNF625Q96I27 306 aaPredicted RBP3.61□□□□□ -1.83
ECHDC1-206ENST00000417628 Q9BRP9 147 aa3.61□□□□□ -1.83
ECHDC1-206ENST00000417628 KRTAP1-5Q9BYS1 174 aa3.61□□□□□ -1.83
ECHDC1-206ENST00000417628 ORMDL1Q9P0S3 153 aa3.61□□□□□ -1.83
ECHDC1-206ENST00000417628 IGKV3D-20A0A0C4DH25 116 aa3.6□□□□□ -1.83
ECHDC1-206ENST00000417628 K7EQD1 137 aa3.6□□□□□ -1.83
ECHDC1-206ENST00000417628 NDUFB1O75438 58 aa3.6□□□□□ -1.83
ECHDC1-206ENST00000417628 LINC00313P59037 77 aa3.6□□□□□ -1.83
ECHDC1-206ENST00000417628 WT1-ASQ06250 92 aa3.6□□□□□ -1.83
ECHDC1-206ENST00000417628 RPL39P5Q59GN2 51 aa3.6□□□□□ -1.83
ECHDC1-206ENST00000417628 FAM19A3Q7Z5A8 133 aa3.6□□□□□ -1.83
ECHDC1-206ENST00000417628 OCR1Q9BZK8 76 aa3.6□□□□□ -1.83
ECHDC1-206ENST00000417628 TRAV12-3A0A0B4J271 114 aa3.59□□□□□ -1.83
ECHDC1-206ENST00000417628 A0A1B0GW54 56 aa3.59□□□□□ -1.83
ECHDC1-206ENST00000417628 PSPHP1O15172 72 aa3.59□□□□□ -1.83
ECHDC1-206ENST00000417628 LYZP61626 148 aa3.59□□□□□ -1.83
ECHDC1-206ENST00000417628 ZCCHC13Q8WW36 166 aaKnown RBP3.59□□□□□ -1.83
ECHDC1-206ENST00000417628 LEAP2Q969E1 77 aa3.59□□□□□ -1.83
ECHDC1-206ENST00000417628 IGLV4-3A0A075B6K6 122 aa3.58□□□□□ -1.84
ECHDC1-206ENST00000417628 HCG22E2RYF7 251 aa3.58□□□□□ -1.84
ECHDC1-206ENST00000417628 H3BUA1 57 aa3.58□□□□□ -1.84
ECHDC1-206ENST00000417628 IGKV1-17P01599 117 aa3.58□□□□□ -1.84
ECHDC1-206ENST00000417628 MIR7-3HGQ8N6C7 128 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms