RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 LRRIQ1Q96JM4 1722 aa0.11□□□□□ -2.39
ATG4C-204ENST00000414558 ADIRFQ15847 76 aa0.11□□□□□ -2.39
ATG4C-204ENST00000414558 TDRG1Q3Y452 100 aa0.11□□□□□ -2.39
ATG4C-204ENST00000414558 ATP5EP2Q5VTU8 51 aa0.11□□□□□ -2.39
ATG4C-204ENST00000414558 GAFA1Q96PS6 74 aa0.11□□□□□ -2.39
ATG4C-204ENST00000414558 ST20Q9HBF5 79 aa0.11□□□□□ -2.39
ATG4C-204ENST00000414558 EIF2AK4Q9P2K8 1649 aaKnown RBP0.11□□□□□ -2.39
ATG4C-204ENST00000414558 CSPG4Q6UVK1 2322 aa0.11□□□□□ -2.39
ATG4C-204ENST00000414558 MAP3K1Q13233 1512 aa0.11□□□□□ -2.39
ATG4C-204ENST00000414558 RRBP1Q9P2E9 1410 aaKnown RBP0.11□□□□□ -2.39
ATG4C-204ENST00000414558 CELSR1Q9NYQ6 3014 aa0.11□□□□□ -2.39
ATG4C-204ENST00000414558 ABCA8O94911 1581 aa0.11□□□□□ -2.39
ATG4C-204ENST00000414558 THOC2Q8NI27 1593 aaKnown RBP0.11□□□□□ -2.39
ATG4C-204ENST00000414558 BSNQ9UPA5 3926 aa0.1□□□□□ -2.39
ATG4C-204ENST00000414558 TNXBP22105 4242 aa0.1□□□□□ -2.39
ATG4C-204ENST00000414558 ATRQ13535 2644 aa0.1□□□□□ -2.39
ATG4C-204ENST00000414558 ALMS1Q8TCU4 4167 aa0.1□□□□□ -2.39
ATG4C-204ENST00000414558 COX6B2Q6YFQ2 88 aa0.1□□□□□ -2.39
ATG4C-204ENST00000414558 WFDC9Q8NEX5 89 aa0.1□□□□□ -2.39
ATG4C-204ENST00000414558 APLNQ9ULZ1 77 aa0.1□□□□□ -2.39
ATG4C-204ENST00000414558 CNOT1A5YKK6 2376 aaKnown RBP0.1□□□□□ -2.39
ATG4C-204ENST00000414558 PARP4Q9UKK3 1724 aaKnown RBP0.1□□□□□ -2.39
ATG4C-204ENST00000414558 LPAP08519 4548 aa0.1□□□□□ -2.39
ATG4C-204ENST00000414558 NCOA2Q15596 1464 aa0.1□□□□□ -2.39
ATG4C-204ENST00000414558 CICQ96RK0 1608 aaPredicted RBP0.09□□□□□ -2.39
ATG4C-204ENST00000414558 CACNA1AO00555 2505 aa0.09□□□□□ -2.39
ATG4C-204ENST00000414558 TRAV21A0A0B4J279 112 aa0.09□□□□□ -2.4
ATG4C-204ENST00000414558 LOC730098B7Z3J9 87 aa0.09□□□□□ -2.4
ATG4C-204ENST00000414558 KLK9Q2XQG4 91 aa0.09□□□□□ -2.4
ATG4C-204ENST00000414558 H1FX-AS1Q4G0G2 97 aa0.09□□□□□ -2.4
ATG4C-204ENST00000414558 CDKN2A-AS1Q9UH64 79 aa0.09□□□□□ -2.4
ATG4C-204ENST00000414558 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.09□□□□□ -2.42e-12■■■■■ 46.8
ATG4C-204ENST00000414558 HMCN2Q8NDA2 5059 aa0.08□□□□□ -2.4
ATG4C-204ENST00000414558 REV3LO60673 3130 aa0.08□□□□□ -2.4
ATG4C-204ENST00000414558 ITSN1Q15811 1721 aa0.08□□□□□ -2.4
ATG4C-204ENST00000414558 RICTORQ6R327 1708 aa0.08□□□□□ -2.4
ATG4C-204ENST00000414558 MYO5CQ9NQX4 1742 aa0.08□□□□□ -2.4
ATG4C-204ENST00000414558 PLXNC1O60486 1568 aa0.08□□□□□ -2.4
ATG4C-204ENST00000414558 ADAMTS12P58397 1594 aa0.08□□□□□ -2.4
ATG4C-204ENST00000414558 ANKARQ7Z5J8 1434 aa0.08□□□□□ -2.4
ATG4C-204ENST00000414558 HMGA1P17096 107 aaKnown RBP0.08□□□□□ -2.4
ATG4C-204ENST00000414558 SPRR2DP22532 72 aa0.08□□□□□ -2.4
ATG4C-204ENST00000414558 DEFB121Q5J5C9 76 aa0.08□□□□□ -2.4
ATG4C-204ENST00000414558 HEPN1Q6WQI6 88 aa0.08□□□□□ -2.4
ATG4C-204ENST00000414558 FLNCQ14315 2725 aa0.08□□□□□ -2.4
ATG4C-204ENST00000414558 EP300Q09472 2414 aaPredicted RBP0.08□□□□□ -2.4
ATG4C-204ENST00000414558 DMBT1Q9UGM3 2413 aaPredicted RBP0.08□□□□□ -2.4
ATG4C-204ENST00000414558 COL7A1Q02388 2944 aa0.08□□□□□ -2.4
ATG4C-204ENST00000414558 WIZO95785 1651 aa0.08□□□□□ -2.4
ATG4C-204ENST00000414558 NHSQ6T4R5 1651 aa0.08□□□□□ -2.4
ATG4C-204ENST00000414558 ANKRD50Q9ULJ7 1429 aa0.07□□□□□ -2.4
ATG4C-204ENST00000414558 DEPDC5O75140 1603 aa0.07□□□□□ -2.4
ATG4C-204ENST00000414558 IQGAP3Q86VI3 1631 aa0.07□□□□□ -2.4
ATG4C-204ENST00000414558 UMAD1C9J7I0 102 aa0.07□□□□□ -2.4
ATG4C-204ENST00000414558 H3BUT2 72 aa0.07□□□□□ -2.4
ATG4C-204ENST00000414558 M0R2T5 61 aa0.07□□□□□ -2.4
ATG4C-204ENST00000414558 PRM1P04553 51 aa0.07□□□□□ -2.4
ATG4C-204ENST00000414558 BVES-AS1Q5T3Y7 98 aa0.07□□□□□ -2.4
ATG4C-204ENST00000414558 HECTD4Q9Y4D8 3996 aa0.07□□□□□ -2.4
ATG4C-204ENST00000414558 RNF17Q9BXT8 1623 aaKnown RBP0.06□□□□□ -2.4
ATG4C-204ENST00000414558 DCHS2Q6V1P9 2916 aa0.06□□□□□ -2.4
ATG4C-204ENST00000414558 LCE6AA0A183 80 aa0.06□□□□□ -2.4
ATG4C-204ENST00000414558 IFI27P40305 119 aaPredicted RBP0.06□□□□□ -2.4
ATG4C-204ENST00000414558 CHD8Q9HCK8 2581 aa0.06□□□□□ -2.4
ATG4C-204ENST00000414558 TJP1Q07157 1748 aa0.06□□□□□ -2.4
ATG4C-204ENST00000414558 NRAPQ86VF7 1730 aa0.06□□□□□ -2.4
ATG4C-204ENST00000414558 WNK1Q9H4A3 2382 aa0.06□□□□□ -2.4
ATG4C-204ENST00000414558 SSPOA2VEC9 5147 aa0.05□□□□□ -2.4
ATG4C-204ENST00000414558 ZC3H13Q5T200 1668 aaKnown RBP0.05□□□□□ -2.4
ATG4C-204ENST00000414558 SETXQ7Z333 2677 aaKnown RBP0.05□□□□□ -2.4
ATG4C-204ENST00000414558 TRANK1O15050 2925 aa0.05□□□□□ -2.4
ATG4C-204ENST00000414558 CD163L1Q9NR16 1453 aa0.05□□□□□ -2.4
ATG4C-204ENST00000414558 LMTK2Q8IWU2 1503 aa0.05□□□□□ -2.4
ATG4C-204ENST00000414558 A0A087WXM4 84 aa0.05□□□□□ -2.4
ATG4C-204ENST00000414558 IFI6P09912 130 aa0.05□□□□□ -2.4
ATG4C-204ENST00000414558 NREPQ16612 68 aa0.05□□□□□ -2.4
ATG4C-204ENST00000414558 DEFB135Q30KP9 77 aa0.05□□□□□ -2.4
ATG4C-204ENST00000414558 WFDC13Q8IUB5 93 aa0.05□□□□□ -2.4
ATG4C-204ENST00000414558 C18orf32Q8TCD1 76 aa0.05□□□□□ -2.4
ATG4C-204ENST00000414558 HSPG2P98160 4391 aa0.05□□□□□ -2.4
ATG4C-204ENST00000414558 APC2O95996 2303 aa0.05□□□□□ -2.4
ATG4C-204ENST00000414558 KNL1Q8NG31 2342 aa0.05□□□□□ -2.4
ATG4C-204ENST00000414558 FLNAP21333 2647 aaKnown RBP0.05□□□□□ -2.4
ATG4C-204ENST00000414558 HFM1A2PYH4 1435 aa0.04□□□□□ -2.4
ATG4C-204ENST00000414558 RALGAPBQ86X10 1494 aa0.04□□□□□ -2.4
ATG4C-204ENST00000414558 UGGT2Q9NYU1 1516 aa0.04□□□□□ -2.4
ATG4C-204ENST00000414558 MAP1BP46821 2468 aaKnown RBP0.04□□□□□ -2.4
ATG4C-204ENST00000414558 NDUFA4O00483 81 aa0.04□□□□□ -2.4
ATG4C-204ENST00000414558 NDUFA3O95167 84 aa0.04□□□□□ -2.4
ATG4C-204ENST00000414558 C3orf79P0CE67 100 aa0.04□□□□□ -2.4
ATG4C-204ENST00000414558 SMIM13P0DJ93 91 aa0.04□□□□□ -2.4
ATG4C-204ENST00000414558 SPRR2BP35325 72 aa0.04□□□□□ -2.4
ATG4C-204ENST00000414558 LELP1Q5T871 98 aa0.04□□□□□ -2.4
ATG4C-204ENST00000414558 SPRR2GQ9BYE4 73 aa0.04□□□□□ -2.4
ATG4C-204ENST00000414558 FLNBO75369 2602 aaKnown RBP0.04□□□□□ -2.4
ATG4C-204ENST00000414558 C3P01024 1663 aa0.04□□□□□ -2.4
ATG4C-204ENST00000414558 MACF1Q9UPN3 7388 aaKnown RBP0.03□□□□□ -2.4
ATG4C-204ENST00000414558 BPTFQ12830 3046 aa0.03□□□□□ -2.4
ATG4C-204ENST00000414558 INO80Q9ULG1 1556 aaPredicted RBP0.03□□□□□ -2.4
ATG4C-204ENST00000414558 COL6A3P12111 3177 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms