RNA–Protein interactions for RNA: ENST00000410473.1

RNU4-65P-201, Transcript of RNA, U4 small nuclear 65, pseudogene, humanhuman

BASIC

Gene RNU4-65P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-65P-201ENST00000410473 MRPL34Q9BQ48 92 aaKnown RBP1.2□□□□□ -2.22
RNU4-65P-201ENST00000410473 C4AP0C0L4 1744 aa1.2□□□□□ -2.22
RNU4-65P-201ENST00000410473 C4BP0C0L5 1744 aa1.2□□□□□ -2.22
RNU4-65P-201ENST00000410473 ROS1P08922 2347 aa1.2□□□□□ -2.22
RNU4-65P-201ENST00000410473 COL6A6A6NMZ7 2263 aa1.19□□□□□ -2.22
RNU4-65P-201ENST00000410473 SPINK9Q5DT21 86 aa1.19□□□□□ -2.22
RNU4-65P-201ENST00000410473 CNFNQ9BYD5 112 aa1.19□□□□□ -2.22
RNU4-65P-201ENST00000410473 MUC19Q7Z5P9 8384 aa1.18□□□□□ -2.22
RNU4-65P-201ENST00000410473 COX6A2Q02221 97 aa1.18□□□□□ -2.22
RNU4-65P-201ENST00000410473 PIGYQ3MUY2 71 aa1.18□□□□□ -2.22
RNU4-65P-201ENST00000410473 LELP1Q5T871 98 aa1.18□□□□□ -2.22
RNU4-65P-201ENST00000410473 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.17□□□□□ -2.22
RNU4-65P-201ENST00000410473 IQGAP1P46940 1657 aa1.17□□□□□ -2.22
RNU4-65P-201ENST00000410473 DEFB131BA0A096LNP1 70 aa1.17□□□□□ -2.22
RNU4-65P-201ENST00000410473 I3L3M4 83 aa1.17□□□□□ -2.22
RNU4-65P-201ENST00000410473 CRIP1P50238 77 aa1.17□□□□□ -2.22
RNU4-65P-201ENST00000410473 KRTAP21-3Q3LHN1 58 aa1.17□□□□□ -2.22
RNU4-65P-201ENST00000410473 PRO0255Q9UI72 69 aa1.17□□□□□ -2.22
RNU4-65P-201ENST00000410473 CACNA1EQ15878 2313 aa1.17□□□□□ -2.22
RNU4-65P-201ENST00000410473 GOLGA4Q13439 2230 aaKnown RBP1.16□□□□□ -2.22
RNU4-65P-201ENST00000410473 PRB3Q04118 309 aaPredicted RBP1.16□□□□□ -2.22
RNU4-65P-201ENST00000410473 USMG5Q96IX5 58 aa1.16□□□□□ -2.22
RNU4-65P-201ENST00000410473 PRO3102Q9H379 93 aa1.16□□□□□ -2.22
RNU4-65P-201ENST00000410473 PRH1P02810 166 aa1.15□□□□□ -2.23
RNU4-65P-201ENST00000410473 NMES1Q9C002 83 aa1.15□□□□□ -2.23
RNU4-65P-201ENST00000410473 CMC2Q9NRP2 79 aa1.15□□□□□ -2.23
RNU4-65P-201ENST00000410473 BPTFQ12830 3046 aa1.14□□□□□ -2.23
RNU4-65P-201ENST00000410473 LOC730098B7Z3J9 87 aa1.14□□□□□ -2.23
RNU4-65P-201ENST00000410473 COX6B1P14854 86 aa1.14□□□□□ -2.23
RNU4-65P-201ENST00000410473 Q8IZM0 81 aa1.14□□□□□ -2.23
RNU4-65P-201ENST00000410473 TOMM5Q8N4H5 51 aa1.14□□□□□ -2.23
RNU4-65P-201ENST00000410473 DEPDC5O75140 1603 aa1.14□□□□□ -2.23
RNU4-65P-201ENST00000410473 ASH1LQ9NR48 2969 aaKnown RBP1.14□□□□□ -2.23
RNU4-65P-201ENST00000410473 NDUFA3O95167 84 aa1.13□□□□□ -2.23
RNU4-65P-201ENST00000410473 CDKN2A-AS1Q9UH64 79 aa1.13□□□□□ -2.23
RNU4-65P-201ENST00000410473 DDX60Q8IY21 1712 aaKnown RBP1.12□□□□□ -2.23
RNU4-65P-201ENST00000410473 CNOT1A5YKK6 2376 aaKnown RBP1.12□□□□□ -2.23
RNU4-65P-201ENST00000410473 H0YAA0 97 aa1.12□□□□□ -2.23
RNU4-65P-201ENST00000410473 SPRR1AP35321 89 aa1.12□□□□□ -2.23
RNU4-65P-201ENST00000410473 PIEZO2Q9H5I5 2752 aa1.12□□□□□ -2.23
RNU4-65P-201ENST00000410473 MRPL33O75394 65 aaKnown RBP1.11□□□□□ -2.23
RNU4-65P-201ENST00000410473 PLNP26678 52 aa1.11□□□□□ -2.23
RNU4-65P-201ENST00000410473 CDC42BPAQ5VT25 1732 aa1.11□□□□□ -2.23
RNU4-65P-201ENST00000410473 CCL22O00626 93 aa1.1□□□□□ -2.23
RNU4-65P-201ENST00000410473 SERF2P84101 59 aa1.1□□□□□ -2.23
RNU4-65P-201ENST00000410473 Q5VSD8 79 aa1.1□□□□□ -2.23
RNU4-65P-201ENST00000410473 DOPEY2Q9Y3R5 2298 aa1.1□□□□□ -2.23
RNU4-65P-201ENST00000410473 TRPM2O94759 1503 aa1.1□□□□□ -2.23
RNU4-65P-201ENST00000410473 PLCE1Q9P212 2302 aa1.09□□□□□ -2.23
RNU4-65P-201ENST00000410473 SMIM27A0A1W2PRY6 76 aa1.09□□□□□ -2.23
RNU4-65P-201ENST00000410473 H1FX-AS1Q4G0G2 97 aa1.09□□□□□ -2.23
RNU4-65P-201ENST00000410473 COX6B2Q6YFQ2 88 aa1.09□□□□□ -2.23
RNU4-65P-201ENST00000410473 ABRACLQ9P1F3 81 aa1.09□□□□□ -2.23
RNU4-65P-201ENST00000410473 LMO7Q8WWI1 1683 aa1.09□□□□□ -2.24
RNU4-65P-201ENST00000410473 USF3Q68DE3 2245 aa1.08□□□□□ -2.24
RNU4-65P-201ENST00000410473 LINC01546A6NGU7 62 aa1.07□□□□□ -2.24
RNU4-65P-201ENST00000410473 KRTAP5-8O75690 187 aa1.07□□□□□ -2.24
RNU4-65P-201ENST00000410473 SPRR1BP22528 89 aa1.07□□□□□ -2.24
RNU4-65P-201ENST00000410473 LINC00158P58513 81 aa1.07□□□□□ -2.24
RNU4-65P-201ENST00000410473 DEFB105AQ8NG35 78 aa1.07□□□□□ -2.24
RNU4-65P-201ENST00000410473 APLNQ9ULZ1 77 aa1.07□□□□□ -2.24
RNU4-65P-201ENST00000410473 PTPRZ1P23471 2315 aaPredicted RBP1.06□□□□□ -2.24
RNU4-65P-201ENST00000410473 NFAT5O94916 1531 aa1.06□□□□□ -2.24
RNU4-65P-201ENST00000410473 ATP7AQ04656 1500 aa1.06□□□□□ -2.24
RNU4-65P-201ENST00000410473 KRTAP21-2Q3LI59 83 aa1.05□□□□□ -2.24
RNU4-65P-201ENST00000410473 KIF21BO75037 1637 aa1.04□□□□□ -2.24
RNU4-65P-201ENST00000410473 PTPRQQ9UMZ3 2332 aa1.04□□□□□ -2.24
RNU4-65P-201ENST00000410473 ZNF462Q96JM2 2506 aa1.04□□□□□ -2.24
RNU4-65P-201ENST00000410473 LYNX1G3V0Z9 82 aa1.04□□□□□ -2.24
RNU4-65P-201ENST00000410473 KLK9Q2XQG4 91 aa1.04□□□□□ -2.24
RNU4-65P-201ENST00000410473 HELZ2Q9BYK8 2649 aaKnown RBP1.04□□□□□ -2.24
RNU4-65P-201ENST00000410473 MEGF8Q7Z7M0 2845 aa1.04□□□□□ -2.24
RNU4-65P-201ENST00000410473 ANK2Q01484 3957 aa1.03□□□□□ -2.24
RNU4-65P-201ENST00000410473 CACNA1HO95180 2353 aa1.03□□□□□ -2.24
RNU4-65P-201ENST00000410473 C2CD3Q4AC94 2353 aa1.03□□□□□ -2.24
RNU4-65P-201ENST00000410473 WFDC13Q8IUB5 93 aa1.03□□□□□ -2.24
RNU4-65P-201ENST00000410473 TIMM8BQ9Y5J9 83 aaPredicted RBP1.03□□□□□ -2.24
RNU4-65P-201ENST00000410473 H0YGX0 51 aa1.02□□□□□ -2.25
RNU4-65P-201ENST00000410473 SPINK4O60575 86 aa1.02□□□□□ -2.25
RNU4-65P-201ENST00000410473 LINC00308Q8TCZ7 52 aa1□□□□□ -2.25
RNU4-65P-201ENST00000410473 DEFB130BP0DP73 79 aa0.99□□□□□ -2.25
RNU4-65P-201ENST00000410473 DEFB130AP0DP74 79 aa0.99□□□□□ -2.25
RNU4-65P-201ENST00000410473 IAPPP10997 89 aa0.99□□□□□ -2.25
RNU4-65P-201ENST00000410473 MINOS1Q5TGZ0 78 aa0.99□□□□□ -2.25
RNU4-65P-201ENST00000410473 TTC28Q96AY4 2481 aa0.98□□□□□ -2.25
RNU4-65P-201ENST00000410473 FRAS1Q86XX4 4008 aa0.98□□□□□ -2.25
RNU4-65P-201ENST00000410473 RPS27P42677 84 aaKnown RBP0.98□□□□□ -2.25
RNU4-65P-201ENST00000410473 RPS27LQ71UM5 84 aaKnown RBP0.98□□□□□ -2.25
RNU4-65P-201ENST00000410473 TMEM167BQ9NRX6 74 aa0.98□□□□□ -2.25
RNU4-65P-201ENST00000410473 REV3LO60673 3130 aa0.98□□□□□ -2.25
RNU4-65P-201ENST00000410473 SAMD9LQ8IVG5 1584 aa0.97□□□□□ -2.25
RNU4-65P-201ENST00000410473 TFF3Q07654 80 aa0.97□□□□□ -2.25
RNU4-65P-201ENST00000410473 C6orf48Q9UBA6 75 aa0.97□□□□□ -2.25
RNU4-65P-201ENST00000410473 CSMD3Q7Z407 3707 aa0.96□□□□□ -2.26
RNU4-65P-201ENST00000410473 SPTBN2O15020 2390 aa0.96□□□□□ -2.26
RNU4-65P-201ENST00000410473 CRCT1Q9UGL9 99 aa0.95□□□□□ -2.26
RNU4-65P-201ENST00000410473 PRKDCP78527 4128 aaKnown RBP0.94□□□□□ -2.26
RNU4-65P-201ENST00000410473 POLQO75417 2590 aa0.94□□□□□ -2.26
RNU4-65P-201ENST00000410473 SPTBN1Q01082 2364 aaKnown RBP0.92□□□□□ -2.26
RNU4-65P-201ENST00000410473 ZNF292O60281 2723 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms