RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 LINC00528Q8N1L1 170 aa5.63□□□□□ -1.51
SCN9A-203ENST00000409672 LINC01561Q8N1V8 128 aa5.62□□□□□ -1.51
SCN9A-203ENST00000409672 PRUNE2Q8WUY3 3088 aa5.62□□□□□ -1.51
SCN9A-203ENST00000409672 Q8N1X5 172 aa5.62□□□□□ -1.51
SCN9A-203ENST00000409672 TRBV7-4A0A0J9YYF1 115 aa5.61□□□□□ -1.51
SCN9A-203ENST00000409672 KRTAP10-3P60369 221 aa5.61□□□□□ -1.51
SCN9A-203ENST00000409672 CRIPTQ9P021 101 aa5.61□□□□□ -1.51
SCN9A-203ENST00000409672 FREM2Q5SZK8 3169 aa5.6□□□□□ -1.51
SCN9A-203ENST00000409672 A0A087WTM6 91 aa5.6□□□□□ -1.51
SCN9A-203ENST00000409672 A0A096LNJ9 63 aa5.6□□□□□ -1.51
SCN9A-203ENST00000409672 LINC00310P59036 64 aa5.6□□□□□ -1.51
SCN9A-203ENST00000409672 C4orf26Q17RF5 130 aa5.6□□□□□ -1.51
SCN9A-203ENST00000409672 MRPL34Q9BQ48 92 aaKnown RBP5.59□□□□□ -1.51
SCN9A-203ENST00000409672 GVQW2A0A096LPI5 108 aaPredicted RBP5.58□□□□□ -1.52
SCN9A-203ENST00000409672 H3BNG1 76 aa5.58□□□□□ -1.52
SCN9A-203ENST00000409672 IGLV5-48A0A075B6I7 105 aa5.58□□□□□ -1.52
SCN9A-203ENST00000409672 IGLV5-45A0A087WSX0 123 aa5.57□□□□□ -1.52
SCN9A-203ENST00000409672 Q6ZQT0 140 aa5.57□□□□□ -1.52
SCN9A-203ENST00000409672 PLA2G2DQ9UNK4 145 aa5.57□□□□□ -1.52
SCN9A-203ENST00000409672 Q6ZSA8 131 aa5.57□□□□□ -1.52
SCN9A-203ENST00000409672 ZNF861PO60384 105 aa5.57□□□□□ -1.52
SCN9A-203ENST00000409672 C8orf87E5RJ46 101 aa5.57□□□□□ -1.52
SCN9A-203ENST00000409672 A8MWP4 228 aa5.56□□□□□ -1.52
SCN9A-203ENST00000409672 CASC10Q5T4H9 136 aa5.56□□□□□ -1.52
SCN9A-203ENST00000409672 PSORS1C2Q9UIG4 136 aa5.55□□□□□ -1.52
SCN9A-203ENST00000409672 FLG2Q5D862 2391 aaPredicted RBP5.55□□□□□ -1.52
SCN9A-203ENST00000409672 IGFL1Q6UW32 110 aa5.54□□□□□ -1.52
SCN9A-203ENST00000409672 COA5Q86WW8 74 aa5.54□□□□□ -1.52
SCN9A-203ENST00000409672 USP9YO00507 2555 aaPredicted RBP5.54□□□□□ -1.52
SCN9A-203ENST00000409672 TRIOO75962 3097 aa5.53□□□□□ -1.52
SCN9A-203ENST00000409672 TNP2Q05952 138 aa5.53□□□□□ -1.52
SCN9A-203ENST00000409672 RANBP2P49792 3224 aaKnown RBP5.53□□□□□ -1.52
SCN9A-203ENST00000409672 IGLV7-43P04211 117 aa5.52□□□□□ -1.53
SCN9A-203ENST00000409672 CAMK2N1Q7Z7J9 78 aa5.52□□□□□ -1.53
SCN9A-203ENST00000409672 VPREB1P12018 145 aa5.52□□□□□ -1.53
SCN9A-203ENST00000409672 A0A0C4DFX4 3053 aa5.52□□□□□ -1.53
SCN9A-203ENST00000409672 LINC00336Q6ZUF6 198 aa5.51□□□□□ -1.53
SCN9A-203ENST00000409672 IGLV7-46A0A075B6I9 117 aa5.5□□□□□ -1.53
SCN9A-203ENST00000409672 PRR26Q8N8Z3 221 aa5.5□□□□□ -1.53
SCN9A-203ENST00000409672 MIR22HGQ0VDD5 57 aa5.5□□□□□ -1.53
SCN9A-203ENST00000409672 C8orf17Q9NRJ1 99 aa5.5□□□□□ -1.53
SCN9A-203ENST00000409672 LOC101927531A0A1B0GV80 90 aa5.49□□□□□ -1.53
SCN9A-203ENST00000409672 UNC80Q8N2C7 3258 aa5.49□□□□□ -1.53
SCN9A-203ENST00000409672 VCANP13611 3396 aa5.49□□□□□ -1.53
SCN9A-203ENST00000409672 COX8CQ7Z4L0 72 aa5.49□□□□□ -1.53
SCN9A-203ENST00000409672 A0A1B0GVX0 72 aa5.48□□□□□ -1.53
SCN9A-203ENST00000409672 A8MUN3 132 aa5.48□□□□□ -1.53
SCN9A-203ENST00000409672 PRR15Q8IV56 129 aa5.48□□□□□ -1.53
SCN9A-203ENST00000409672 UQCR11O14957 56 aa5.47□□□□□ -1.53
SCN9A-203ENST00000409672 VPS13AQ96RL7 3174 aa5.46□□□□□ -1.54
SCN9A-203ENST00000409672 SPEGQ15772 3267 aa5.46□□□□□ -1.54
SCN9A-203ENST00000409672 Q5VSD8 79 aa5.45□□□□□ -1.54
SCN9A-203ENST00000409672 LINC00612Q8N6U2 182 aa5.45□□□□□ -1.54
SCN9A-203ENST00000409672 C19orf73Q9NVV2 129 aa5.45□□□□□ -1.54
SCN9A-203ENST00000409672 Q8N377 158 aa5.45□□□□□ -1.54
SCN9A-203ENST00000409672 ERC2-IT1O76042 136 aa5.44□□□□□ -1.54
SCN9A-203ENST00000409672 LOC110117498A0A087WWA1 95 aa5.44□□□□□ -1.54
SCN9A-203ENST00000409672 SMCPP49901 116 aaPredicted RBP5.44□□□□□ -1.54
SCN9A-203ENST00000409672 CEP295Q9C0D2 2601 aa5.43□□□□□ -1.54
SCN9A-203ENST00000409672 COL6A3P12111 3177 aa5.43□□□□□ -1.54
SCN9A-203ENST00000409672 EPG5Q9HCE0 2579 aa5.42□□□□□ -1.54
SCN9A-203ENST00000409672 C9orf163Q8N9P6 203 aa5.41□□□□□ -1.54
SCN9A-203ENST00000409672 MGAM2Q2M2H8 2515 aa5.41□□□□□ -1.54
SCN9A-203ENST00000409672 KCNQ1DNQ9H478 68 aa5.41□□□□□ -1.54
SCN9A-203ENST00000409672 USP34Q70CQ2 3546 aa5.4□□□□□ -1.54
SCN9A-203ENST00000409672 H3BPC8 53 aa5.4□□□□□ -1.54
SCN9A-203ENST00000409672 LUZP6Q538Z0 58 aa5.4□□□□□ -1.54
SCN9A-203ENST00000409672 CDC42SE1Q9NRR8 79 aa5.4□□□□□ -1.54
SCN9A-203ENST00000409672 EIF4EBP3O60516 100 aaPredicted RBP5.39□□□□□ -1.55
SCN9A-203ENST00000409672 SPRR4Q96PI1 79 aa5.39□□□□□ -1.55
SCN9A-203ENST00000409672 MYO15AQ9UKN7 3530 aa5.39□□□□□ -1.55
SCN9A-203ENST00000409672 WIPF1O43516 503 aa5.38□□□□□ -1.55
SCN9A-203ENST00000409672 TLX1NBP0CAT3 122 aa5.38□□□□□ -1.55
SCN9A-203ENST00000409672 FAM104AQ969W3 186 aa5.38□□□□□ -1.55
SCN9A-203ENST00000409672 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.38□□□□□ -1.55
SCN9A-203ENST00000409672 LINC01546A6NGU7 62 aa5.38□□□□□ -1.55
SCN9A-203ENST00000409672 CFAP47Q6ZTR5 3102 aa5.37□□□□□ -1.55
SCN9A-203ENST00000409672 GIG44P09565 113 aaPredicted RBP5.37□□□□□ -1.55
SCN9A-203ENST00000409672 C10orf142B7Z368 130 aa5.36□□□□□ -1.55
SCN9A-203ENST00000409672 SPTBN5Q9NRC6 3674 aaKnown RBP5.36□□□□□ -1.55
SCN9A-203ENST00000409672 CFAP46Q8IYW2 2715 aa5.36□□□□□ -1.55
SCN9A-203ENST00000409672 PRO0628Q9UI54 55 aa5.36□□□□□ -1.55
SCN9A-203ENST00000409672 EYSQ5T1H1 3165 aa5.35□□□□□ -1.55
SCN9A-203ENST00000409672 LINC00483Q53H64 154 aa5.35□□□□□ -1.55
SCN9A-203ENST00000409672 HECTD1Q9ULT8 2610 aa5.34□□□□□ -1.55
SCN9A-203ENST00000409672 WDFY4Q6ZS81 3184 aa5.34□□□□□ -1.55
SCN9A-203ENST00000409672 S4R3F8 94 aa5.34□□□□□ -1.55
SCN9A-203ENST00000409672 AKAP13Q12802 2813 aa5.34□□□□□ -1.55
SCN9A-203ENST00000409672 A0A1B0GW54 56 aa5.33□□□□□ -1.56
SCN9A-203ENST00000409672 PRR34Q9NV39 138 aa5.32□□□□□ -1.56
SCN9A-203ENST00000409672 CRYBG3Q68DQ2 2970 aa5.32□□□□□ -1.56
SCN9A-203ENST00000409672 LITAFQ99732 161 aa5.32□□□□□ -1.56
SCN9A-203ENST00000409672 FLNBO75369 2602 aaKnown RBP5.32□□□□□ -1.56
SCN9A-203ENST00000409672 KRTAP1-3Q8IUG1 177 aa5.32□□□□□ -1.56
SCN9A-203ENST00000409672 ATRQ13535 2644 aa5.3□□□□□ -1.56
SCN9A-203ENST00000409672 HTTP42858 3142 aa5.3□□□□□ -1.56
SCN9A-203ENST00000409672 CD164Q04900 197 aa5.3□□□□□ -1.56
SCN9A-203ENST00000409672 ITPR3Q14573 2671 aa5.28□□□□□ -1.56
SCN9A-203ENST00000409672 A0A096LNT2 108 aa5.28□□□□□ -1.56
SCN9A-203ENST00000409672 RPS28P62857 69 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms