RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 KLK9Q2XQG4 91 aa8□□□□□ -1.13
CACNA1C-219ENST00000399649 SONP18583 2426 aaKnown RBP7.99□□□□□ -1.13
CACNA1C-219ENST00000399649 PSORS1C2Q9UIG4 136 aa7.99□□□□□ -1.13
CACNA1C-219ENST00000399649 CUL9Q8IWT3 2517 aa7.98□□□□□ -1.13
CACNA1C-219ENST00000399649 C9orf163Q8N9P6 203 aa7.98□□□□□ -1.13
CACNA1C-219ENST00000399649 BDP1A6H8Y1 2624 aa7.98□□□□□ -1.13
CACNA1C-219ENST00000399649 SPG11Q96JI7 2443 aa7.97□□□□□ -1.13
CACNA1C-219ENST00000399649 Q6ZSA8 131 aa7.96□□□□□ -1.14
CACNA1C-219ENST00000399649 CAMK2N1Q7Z7J9 78 aa7.95□□□□□ -1.14
CACNA1C-219ENST00000399649 Q1T7F1 81 aa7.95□□□□□ -1.14
CACNA1C-219ENST00000399649 EIF4EBP3O60516 100 aaPredicted RBP7.93□□□□□ -1.14
CACNA1C-219ENST00000399649 PRR26Q8N8Z3 221 aa7.92□□□□□ -1.14
CACNA1C-219ENST00000399649 CNBPP62633 177 aaKnown RBP7.91□□□□□ -1.14
CACNA1C-219ENST00000399649 A0A1W2PNM2 257 aa7.9□□□□□ -1.15
CACNA1C-219ENST00000399649 M0R2T5 61 aa7.89□□□□□ -1.15
CACNA1C-219ENST00000399649 ACACBO00763 2458 aa7.89□□□□□ -1.15
CACNA1C-219ENST00000399649 LINC00612Q8N6U2 182 aa7.88□□□□□ -1.15
CACNA1C-219ENST00000399649 KRTAP10-3P60369 221 aa7.88□□□□□ -1.15
CACNA1C-219ENST00000399649 CCDC168Q8NDH2 2452 aa7.87□□□□□ -1.15
CACNA1C-219ENST00000399649 PCSK5Q92824 1860 aa7.87□□□□□ -1.15
CACNA1C-219ENST00000399649 A0A1B0GU33 70 aa7.86□□□□□ -1.15
CACNA1C-219ENST00000399649 CASC10Q5T4H9 136 aa7.86□□□□□ -1.15
CACNA1C-219ENST00000399649 PCNTO95613 3336 aa7.86□□□□□ -1.15
CACNA1C-219ENST00000399649 ABCA2Q9BZC7 2435 aa7.85□□□□□ -1.15
CACNA1C-219ENST00000399649 GIG44P09565 113 aaPredicted RBP7.85□□□□□ -1.15
CACNA1C-219ENST00000399649 IGLV7-46A0A075B6I9 117 aa7.85□□□□□ -1.15
CACNA1C-219ENST00000399649 NAV2Q8IVL1 2488 aa7.83□□□□□ -1.16
CACNA1C-219ENST00000399649 HRES1P13985 223 aa7.83□□□□□ -1.16
CACNA1C-219ENST00000399649 S4R3F8 94 aa7.81□□□□□ -1.16
CACNA1C-219ENST00000399649 CENPFP49454 3210 aa7.78□□□□□ -1.16
CACNA1C-219ENST00000399649 DMAC1Q96GE9 116 aa7.77□□□□□ -1.17
CACNA1C-219ENST00000399649 Q75L30 129 aa7.77□□□□□ -1.17
CACNA1C-219ENST00000399649 OCR1Q9BZK8 76 aa7.76□□□□□ -1.17
CACNA1C-219ENST00000399649 C2CD3Q4AC94 2353 aa7.75□□□□□ -1.17
CACNA1C-219ENST00000399649 TTC28Q96AY4 2481 aa7.75□□□□□ -1.17
CACNA1C-219ENST00000399649 A0A0A0MQY5 61 aa7.75□□□□□ -1.17
CACNA1C-219ENST00000399649 A0A096LNT2 108 aa7.75□□□□□ -1.17
CACNA1C-219ENST00000399649 DOPEY1Q5JWR5 2465 aa7.74□□□□□ -1.17
CACNA1C-219ENST00000399649 CSAG1Q6PB30 78 aa7.73□□□□□ -1.17
CACNA1C-219ENST00000399649 DNAH12Q6ZR08 3092 aa7.73□□□□□ -1.17
CACNA1C-219ENST00000399649 TNP2Q05952 138 aa7.72□□□□□ -1.17
CACNA1C-219ENST00000399649 ZCCHC13Q8WW36 166 aaKnown RBP7.72□□□□□ -1.17
CACNA1C-219ENST00000399649 CACNA1AO00555 2505 aa7.7□□□□□ -1.18
CACNA1C-219ENST00000399649 FAM229BQ4G0N7 80 aa7.7□□□□□ -1.18
CACNA1C-219ENST00000399649 MYO18BQ8IUG5 2567 aa7.7□□□□□ -1.18
CACNA1C-219ENST00000399649 LRRK2Q5S007 2527 aa7.68□□□□□ -1.18
CACNA1C-219ENST00000399649 LINC01558Q9Y6Z2 57 aa7.68□□□□□ -1.18
CACNA1C-219ENST00000399649 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.67□□□□□ -1.18
CACNA1C-219ENST00000399649 KRTAP1-3Q8IUG1 177 aa7.65□□□□□ -1.18
CACNA1C-219ENST00000399649 SPINK7P58062 85 aa7.63□□□□□ -1.19
CACNA1C-219ENST00000399649 R4GN34 69 aa7.63□□□□□ -1.19
CACNA1C-219ENST00000399649 MMP24-AS1A0A0U1RRL7 71 aa7.63□□□□□ -1.19
CACNA1C-219ENST00000399649 H3BS24 57 aa7.62□□□□□ -1.19
CACNA1C-219ENST00000399649 IGF2RP11717 2491 aa7.62□□□□□ -1.19
CACNA1C-219ENST00000399649 PLAC4Q8WY50 150 aa7.62□□□□□ -1.19
CACNA1C-219ENST00000399649 NCOR2Q9Y618 2525 aa7.61□□□□□ -1.19
CACNA1C-219ENST00000399649 Q8N9P0 234 aaPredicted RBP7.61□□□□□ -1.19
CACNA1C-219ENST00000399649 PRAC1Q96KF2 57 aa7.6□□□□□ -1.19
CACNA1C-219ENST00000399649 KRTAP1-1Q07627 177 aa7.59□□□□□ -1.19
CACNA1C-219ENST00000399649 PIEZO1Q92508 2521 aa7.59□□□□□ -1.19
CACNA1C-219ENST00000399649 Q5W150 140 aa7.59□□□□□ -1.19
CACNA1C-219ENST00000399649 PLAC8Q9NZF1 115 aa7.59□□□□□ -1.19
CACNA1C-219ENST00000399649 SEC61BP60468 96 aaKnown RBP7.57□□□□□ -1.2
CACNA1C-219ENST00000399649 PIEZO2Q9H5I5 2752 aa7.56□□□□□ -1.2
CACNA1C-219ENST00000399649 ROMO1P60602 79 aa7.55□□□□□ -1.2
CACNA1C-219ENST00000399649 MYO9AB2RTY4 2548 aa7.55□□□□□ -1.2
CACNA1C-219ENST00000399649 CEP350Q5VT06 3117 aa7.54□□□□□ -1.2
CACNA1C-219ENST00000399649 Q5VV11 94 aa7.52□□□□□ -1.21
CACNA1C-219ENST00000399649 RPL37P61927 97 aaKnown RBP7.51□□□□□ -1.21
CACNA1C-219ENST00000399649 Q5XG85 94 aa7.51□□□□□ -1.21
CACNA1C-219ENST00000399649 CR1P17927 2039 aa7.5□□□□□ -1.21
CACNA1C-219ENST00000399649 FN1P02751 2386 aaKnown RBP7.5□□□□□ -1.21
CACNA1C-219ENST00000399649 H1FX-AS1Q4G0G2 97 aa7.49□□□□□ -1.21
CACNA1C-219ENST00000399649 M0QZ58 72 aa7.49□□□□□ -1.21
CACNA1C-219ENST00000399649 JMJD1CQ15652 2540 aa7.48□□□□□ -1.21
CACNA1C-219ENST00000399649 SPRR1AP35321 89 aa7.46□□□□□ -1.22
CACNA1C-219ENST00000399649 Q5VSD8 79 aa7.46□□□□□ -1.22
CACNA1C-219ENST00000399649 ZNF462Q96JM2 2506 aa7.45□□□□□ -1.22
CACNA1C-219ENST00000399649 LINC00472Q9H8W2 130 aa7.45□□□□□ -1.22
CACNA1C-219ENST00000399649 C5orf42Q9H799 3197 aa7.44□□□□□ -1.22
CACNA1C-219ENST00000399649 FP248Q71RG6 208 aaPredicted RBP7.44□□□□□ -1.22
CACNA1C-219ENST00000399649 BRCA2P51587 3418 aa7.43□□□□□ -1.22
CACNA1C-219ENST00000399649 ZFYVE26Q68DK2 2539 aa7.43□□□□□ -1.22
CACNA1C-219ENST00000399649 SPRR1BP22528 89 aa7.42□□□□□ -1.22
CACNA1C-219ENST00000399649 ADM2Q7Z4H4 148 aa7.41□□□□□ -1.22
CACNA1C-219ENST00000399649 ABCA12Q86UK0 2595 aa7.41□□□□□ -1.22
CACNA1C-219ENST00000399649 KRTAP26-1Q6PEX3 210 aa7.39□□□□□ -1.23
CACNA1C-219ENST00000399649 Q8NDZ9 215 aa7.38□□□□□ -1.23
CACNA1C-219ENST00000399649 WDR87Q6ZQQ6 2873 aa7.38□□□□□ -1.23
CACNA1C-219ENST00000399649 CYSTM1Q9H1C7 97 aa7.36□□□□□ -1.23
CACNA1C-219ENST00000399649 CHD8Q9HCK8 2581 aa7.36□□□□□ -1.23
CACNA1C-219ENST00000399649 F8P00451 2351 aa7.34□□□□□ -1.23
CACNA1C-219ENST00000399649 ANKRD17O75179 2603 aaKnown RBP7.33□□□□□ -1.24
CACNA1C-219ENST00000399649 OXTP01178 125 aa7.32□□□□□ -1.24
CACNA1C-219ENST00000399649 SPATA8Q6RVD6 105 aa7.32□□□□□ -1.24
CACNA1C-219ENST00000399649 BPTFQ12830 3046 aa7.32□□□□□ -1.24
CACNA1C-219ENST00000399649 TLN1Q9Y490 2541 aaKnown RBP7.32□□□□□ -1.24
CACNA1C-219ENST00000399649 MKI67P46013 3256 aaKnown RBP7.31□□□□□ -1.24
CACNA1C-219ENST00000399649 Q6ZR54 194 aa7.31□□□□□ -1.24
CACNA1C-219ENST00000399649 LAMA3Q16787 3333 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms