RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 A0A0B4J2C4 111 aa6.41□□□□□ -1.38
NEDD8-202ENST00000396828 CFC1BP0CG36 223 aa6.41□□□□□ -1.38
NEDD8-202ENST00000396828 CFC1P0CG37 223 aa6.41□□□□□ -1.38
NEDD8-202ENST00000396828 NKAPP1Q8N9T2 125 aa6.41□□□□□ -1.38
NEDD8-202ENST00000396828 C7orf33Q8WU49 177 aa6.41□□□□□ -1.38
NEDD8-202ENST00000396828 TRBV10-2A0A0K0K1G8 114 aa6.4□□□□□ -1.38
NEDD8-202ENST00000396828 A0A1B0GWB2 263 aa6.4□□□□□ -1.38
NEDD8-202ENST00000396828 NCR3O14931 201 aa6.4□□□□□ -1.38
NEDD8-202ENST00000396828 OR13C6PQ8NH95 151 aa6.4□□□□□ -1.38
NEDD8-202ENST00000396828 PRO1854Q9UHT4 67 aa6.4□□□□□ -1.38
NEDD8-202ENST00000396828 VPREB1P12018 145 aa6.39□□□□□ -1.39
NEDD8-202ENST00000396828 KRTAP10-8P60410 259 aa6.39□□□□□ -1.39
NEDD8-202ENST00000396828 COL5A1-AS1Q5SY13 56 aa6.39□□□□□ -1.39
NEDD8-202ENST00000396828 S100A7L2Q5SY68 101 aa6.39□□□□□ -1.39
NEDD8-202ENST00000396828 IGLV5-37A0A075B6J1 123 aa6.38□□□□□ -1.39
NEDD8-202ENST00000396828 IGKV2-28A0A075B6P5 120 aa6.38□□□□□ -1.39
NEDD8-202ENST00000396828 FAM168BA1KXE4 195 aa6.38□□□□□ -1.39
NEDD8-202ENST00000396828 K7ERJ3 54 aa6.38□□□□□ -1.39
NEDD8-202ENST00000396828 M0R378 163 aa6.38□□□□□ -1.39
NEDD8-202ENST00000396828 IGKV2D-28P01615 120 aa6.38□□□□□ -1.39
NEDD8-202ENST00000396828 FAM19A5Q7Z5A7 132 aaPredicted RBP6.38□□□□□ -1.39
NEDD8-202ENST00000396828 TMEM126AQ9H061 195 aa6.38□□□□□ -1.39
NEDD8-202ENST00000396828 RPL13AP40429 203 aaKnown RBP6.37□□□□□ -1.39
NEDD8-202ENST00000396828 Q1RN00 199 aa6.37□□□□□ -1.39
NEDD8-202ENST00000396828 LBHQ53QV2 105 aaPredicted RBP6.37□□□□□ -1.39
NEDD8-202ENST00000396828 LINC00337Q8N6G1 96 aa6.37□□□□□ -1.39
NEDD8-202ENST00000396828 Q8NDZ9 215 aa6.37□□□□□ -1.39
NEDD8-202ENST00000396828 CBY1Q9Y3M2 126 aa6.37□□□□□ -1.39
NEDD8-202ENST00000396828 H7C2G1 150 aa6.36□□□□□ -1.39
NEDD8-202ENST00000396828 M0QXV9 152 aa6.36□□□□□ -1.39
NEDD8-202ENST00000396828 MRPL55Q7Z7F7 128 aaKnown RBP6.36□□□□□ -1.39
NEDD8-202ENST00000396828 C22orf24Q9Y442 160 aa6.36□□□□□ -1.39
NEDD8-202ENST00000396828 A0A1W2PNN7 141 aa6.35□□□□□ -1.39
NEDD8-202ENST00000396828 SPINK6Q6UWN8 80 aa6.35□□□□□ -1.39
NEDD8-202ENST00000396828 GAGE10A6NGK3 116 aa6.34□□□□□ -1.39
NEDD8-202ENST00000396828 IGLV6-57P01721 117 aa6.34□□□□□ -1.39
NEDD8-202ENST00000396828 TRBV10-3A0A0K0K1G6 114 aa6.33□□□□□ -1.4
NEDD8-202ENST00000396828 TSPAN13O95857 204 aa6.33□□□□□ -1.4
NEDD8-202ENST00000396828 PSMB2P49721 201 aa6.33□□□□□ -1.4
NEDD8-202ENST00000396828 KRTAP7-1Q8IUC3 87 aa6.33□□□□□ -1.4
NEDD8-202ENST00000396828 LINC00167Q96N53 147 aa6.33□□□□□ -1.4
NEDD8-202ENST00000396828 TRAV23DV6A0A075B6W5 121 aa6.32□□□□□ -1.4
NEDD8-202ENST00000396828 C9orf118A6NHY6 69 aa6.32□□□□□ -1.4
NEDD8-202ENST00000396828 TAX1BP3O14907 124 aa6.32□□□□□ -1.4
NEDD8-202ENST00000396828 COX6CP09669 75 aa6.32□□□□□ -1.4
NEDD8-202ENST00000396828 UBE2BP63146 152 aa6.32□□□□□ -1.4
NEDD8-202ENST00000396828 SMIM11BQ8TCY0 68 aa6.32□□□□□ -1.4
NEDD8-202ENST00000396828 IGLV1-50A0A075B6I6 118 aa6.31□□□□□ -1.4
NEDD8-202ENST00000396828 RPL37AP8A6NKH3 93 aa6.31□□□□□ -1.4
NEDD8-202ENST00000396828 RPL28P46779 137 aaKnown RBP6.31□□□□□ -1.4
NEDD8-202ENST00000396828 REG3GQ6UW15 175 aa6.31□□□□□ -1.4
NEDD8-202ENST00000396828 PHF5AQ7RTV0 110 aaKnown RBP6.31□□□□□ -1.4
NEDD8-202ENST00000396828 H3BUT2 72 aa6.3□□□□□ -1.4
NEDD8-202ENST00000396828 PRYO14603 147 aa6.3□□□□□ -1.4
NEDD8-202ENST00000396828 SCGB1C2P0DMR2 95 aa6.3□□□□□ -1.4
NEDD8-202ENST00000396828 VAMP3Q15836 100 aa6.3□□□□□ -1.4
NEDD8-202ENST00000396828 LYRM7Q5U5X0 104 aa6.3□□□□□ -1.4
NEDD8-202ENST00000396828 DIRC1Q969H9 104 aa6.3□□□□□ -1.4
NEDD8-202ENST00000396828 KCNQ1DNQ9H478 68 aa6.3□□□□□ -1.4
NEDD8-202ENST00000396828 PSORS1C2Q9UIG4 136 aa6.3□□□□□ -1.4
NEDD8-202ENST00000396828 ZNF73O43830 326 aaPredicted RBP6.29□□□□□ -1.4
NEDD8-202ENST00000396828 KRTAP11-1Q8IUC1 163 aa6.29□□□□□ -1.4
NEDD8-202ENST00000396828 TRIAP1O43715 76 aa6.28□□□□□ -1.4
NEDD8-202ENST00000396828 FABP2P12104 132 aa6.28□□□□□ -1.4
NEDD8-202ENST00000396828 C6orf99Q4VX62 202 aa6.28□□□□□ -1.4
NEDD8-202ENST00000396828 NAA38Q9BRA0 125 aaKnown RBP6.28□□□□□ -1.4
NEDD8-202ENST00000396828 MUC2Q02817 5179 aa6.28□□□□□ -1.4
NEDD8-202ENST00000396828 TRBV7-6A0A0J9YX20 115 aa6.27□□□□□ -1.41
NEDD8-202ENST00000396828 A0A1W2PPM0 123 aa6.27□□□□□ -1.41
NEDD8-202ENST00000396828 H0YGX0 51 aa6.27□□□□□ -1.41
NEDD8-202ENST00000396828 SNCGO76070 127 aa6.26□□□□□ -1.41
NEDD8-202ENST00000396828 C1orf137Q5JT78 98 aa6.26□□□□□ -1.41
NEDD8-202ENST00000396828 ETDCA0A1B0GVM5 59 aa6.25□□□□□ -1.41
NEDD8-202ENST00000396828 COX7BP24311 80 aa6.25□□□□□ -1.41
NEDD8-202ENST00000396828 PRR26Q8N8Z3 221 aa6.25□□□□□ -1.41
NEDD8-202ENST00000396828 TRBV20-1A0A075B6N2 111 aa6.24□□□□□ -1.41
NEDD8-202ENST00000396828 SPRR1AP35321 89 aa6.24□□□□□ -1.41
NEDD8-202ENST00000396828 SLC25A20O43772 301 aa6.23□□□□□ -1.41
NEDD8-202ENST00000396828 BCE1O60756 84 aa6.23□□□□□ -1.41
NEDD8-202ENST00000396828 ELOF1P60002 83 aaKnown RBP6.23□□□□□ -1.41
NEDD8-202ENST00000396828 FAM19A1Q7Z5A9 133 aa6.23□□□□□ -1.41
NEDD8-202ENST00000396828 SPCS1Q9Y6A9 102 aa6.23□□□□□ -1.41
NEDD8-202ENST00000396828 B5MCH6 92 aa6.22□□□□□ -1.41
NEDD8-202ENST00000396828 KRTAP4-16G5E9R7 235 aaPredicted RBP6.22□□□□□ -1.41
NEDD8-202ENST00000396828 IGLV7-43P04211 117 aa6.22□□□□□ -1.41
NEDD8-202ENST00000396828 ATXN8Q156A1 80 aa6.22□□□□□ -1.41
NEDD8-202ENST00000396828 Q6ZRX8 168 aa6.22□□□□□ -1.41
NEDD8-202ENST00000396828 GTF2H5Q6ZYL4 71 aa6.22□□□□□ -1.41
NEDD8-202ENST00000396828 CLEC2BQ92478 149 aa6.22□□□□□ -1.41
NEDD8-202ENST00000396828 A0A1B0GX51 115 aa6.21□□□□□ -1.42
NEDD8-202ENST00000396828 TCL1BO95988 128 aa6.21□□□□□ -1.42
NEDD8-202ENST00000396828 UBE2AP49459 152 aa6.21□□□□□ -1.42
NEDD8-202ENST00000396828 LINC00575Q6W349 94 aa6.21□□□□□ -1.42
NEDD8-202ENST00000396828 DHRS4-AS1Q9P1J3 65 aa6.21□□□□□ -1.42
NEDD8-202ENST00000396828 A0A1B0GV90 55 aa6.2□□□□□ -1.42
NEDD8-202ENST00000396828 hADV29S1A0JD25 119 aa6.2□□□□□ -1.42
NEDD8-202ENST00000396828 H0Y9J4 135 aa6.2□□□□□ -1.42
NEDD8-202ENST00000396828 K7EP34 96 aa6.2□□□□□ -1.42
NEDD8-202ENST00000396828 LST1O00453 97 aa6.2□□□□□ -1.42
NEDD8-202ENST00000396828 DNAL4O96015 105 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms