RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 KNDC1Q76NI1 1749 aa-1.29□□□□□ -2.62
CMC1-202ENST00000396610 CC2D2AQ9P2K1 1620 aa-1.29□□□□□ -2.62
CMC1-202ENST00000396610 DEFA5Q01523 94 aa-1.3□□□□□ -2.62
CMC1-202ENST00000396610 LRRC37AA6NMS7 1700 aa-1.3□□□□□ -2.62
CMC1-202ENST00000396610 TROQ12816 1431 aaPredicted RBP-1.31□□□□□ -2.62
CMC1-202ENST00000396610 NCOA3Q9Y6Q9 1424 aa-1.31□□□□□ -2.62
CMC1-202ENST00000396610 PMCHL2Q9BQD1 86 aa-1.31□□□□□ -2.62
CMC1-202ENST00000396610 AP4S1Q9Y587 144 aa-1.31□□□□□ -2.62
CMC1-202ENST00000396610 TMEM218A2RU14 115 aa-1.32□□□□□ -2.62
CMC1-202ENST00000396610 PSENENQ9NZ42 101 aa-1.32□□□□□ -2.62
CMC1-202ENST00000396610 ITPR1Q14643 2758 aa-1.33□□□□□ -2.62
CMC1-202ENST00000396610 HMGN3Q15651 99 aa-1.33□□□□□ -2.62
CMC1-202ENST00000396610 SERP2Q8N6R1 65 aa-1.33□□□□□ -2.62
CMC1-202ENST00000396610 TARBP1Q13395 1621 aaKnown RBP-1.33□□□□□ -2.62
CMC1-202ENST00000396610 PRDM15P57071 1507 aaPredicted RBP-1.34□□□□□ -2.62
CMC1-202ENST00000396610 ATOX1O00244 68 aa-1.34□□□□□ -2.62
CMC1-202ENST00000396610 MT-ATP8P03928 68 aa-1.34□□□□□ -2.62
CMC1-202ENST00000396610 IGLC2P0DOY2 106 aa-1.34□□□□□ -2.62
CMC1-202ENST00000396610 IGLC3P0DOY3 106 aa-1.34□□□□□ -2.62
CMC1-202ENST00000396610 ALKAL2Q6UX46 152 aa-1.34□□□□□ -2.62
CMC1-202ENST00000396610 FRYQ5TBA9 3013 aa-1.34□□□□□ -2.62
CMC1-202ENST00000396610 CEP295Q9C0D2 2601 aa-1.34□□□□□ -2.62
CMC1-202ENST00000396610 COL14A1Q05707 1796 aaKnown RBP-1.34□□□□□ -2.62
CMC1-202ENST00000396610 ADAMTS12P58397 1594 aa-1.34□□□□□ -2.62
CMC1-202ENST00000396610 ACACBO00763 2458 aa-1.34□□□□□ -2.62
CMC1-202ENST00000396610 PTPN23Q9H3S7 1636 aa-1.35□□□□□ -2.63
CMC1-202ENST00000396610 D6R8Y8 96 aa-1.35□□□□□ -2.63
CMC1-202ENST00000396610 MUSTN1Q8IVN3 82 aa-1.35□□□□□ -2.63
CMC1-202ENST00000396610 ANKRD36A6QL64 1941 aa-1.35□□□□□ -2.63
CMC1-202ENST00000396610 CHD1O14646 1710 aa-1.35□□□□□ -2.63
CMC1-202ENST00000396610 C5orf42Q9H799 3197 aa-1.35□□□□□ -2.63
CMC1-202ENST00000396610 TOPAZ1Q8N9V7 1692 aa-1.35□□□□□ -2.63
CMC1-202ENST00000396610 DYNC1H1Q14204 4646 aaKnown RBP-1.36□□□□□ -2.63
CMC1-202ENST00000396610 RAPGEF2Q9Y4G8 1499 aa-1.36□□□□□ -2.63
CMC1-202ENST00000396610 SAMD9Q5K651 1589 aa-1.36□□□□□ -2.63
CMC1-202ENST00000396610 FAM135AQ9P2D6 1515 aa-1.36□□□□□ -2.63
CMC1-202ENST00000396610 ANKRD36BQ8N2N9 1353 aa-1.36□□□□□ -2.63
CMC1-202ENST00000396610 SRCAPQ6ZRS2 3230 aa-1.37□□□□□ -2.63
CMC1-202ENST00000396610 LEPROTL1O95214 131 aa-1.37□□□□□ -2.63
CMC1-202ENST00000396610 MT1HP80294 61 aa-1.37□□□□□ -2.63
CMC1-202ENST00000396610 ETDBQ3ZM63 59 aa-1.37□□□□□ -2.63
CMC1-202ENST00000396610 NMSQ5H8A3 153 aa-1.37□□□□□ -2.63
CMC1-202ENST00000396610 ABCC2Q92887 1545 aa-1.37□□□□□ -2.63
CMC1-202ENST00000396610 COL12A1Q99715 3063 aa-1.37□□□□□ -2.63
CMC1-202ENST00000396610 NRXN1Q9ULB1 1477 aa-1.37□□□□□ -2.63
CMC1-202ENST00000396610 DNAH7Q8WXX0 4024 aa-1.37□□□□□ -2.63
CMC1-202ENST00000396610 CELSR3Q9NYQ7 3312 aa-1.38□□□□□ -2.63
CMC1-202ENST00000396610 S100A10P60903 97 aa-1.38□□□□□ -2.63
CMC1-202ENST00000396610 COL5A1-AS1Q5SY13 56 aa-1.38□□□□□ -2.63
CMC1-202ENST00000396610 ZNF720Q7Z2F6 126 aa-1.38□□□□□ -2.63
CMC1-202ENST00000396610 CHD7Q9P2D1 2997 aa-1.38□□□□□ -2.63
CMC1-202ENST00000396610 DNAH8Q96JB1 4490 aa-1.38□□□□□ -2.63
CMC1-202ENST00000396610 CUX1P39880 1505 aa-1.39□□□□□ -2.63
CMC1-202ENST00000396610 TRIOO75962 3097 aa-1.39□□□□□ -2.63
CMC1-202ENST00000396610 KIAA1551Q9HCM1 1747 aa-1.39□□□□□ -2.63
CMC1-202ENST00000396610 SHPRHQ149N8 1683 aa-1.39□□□□□ -2.63
CMC1-202ENST00000396610 ZFYVE16Q7Z3T8 1539 aa-1.4□□□□□ -2.63
CMC1-202ENST00000396610 MYO9AB2RTY4 2548 aa-1.4□□□□□ -2.63
CMC1-202ENST00000396610 F8WEM9 126 aa-1.4□□□□□ -2.63
CMC1-202ENST00000396610 TLN2Q9Y4G6 2542 aa-1.4□□□□□ -2.63
CMC1-202ENST00000396610 UQCRHLA0A096LP55 91 aa-1.41□□□□□ -2.64
CMC1-202ENST00000396610 LINC00032P0C843 101 aa-1.41□□□□□ -2.64
CMC1-202ENST00000396610 S100PP25815 95 aa-1.41□□□□□ -2.64
CMC1-202ENST00000396610 FAUP35544 74 aaKnown RBP-1.41□□□□□ -2.64
CMC1-202ENST00000396610 LRBAP50851 2863 aa-1.41□□□□□ -2.64
CMC1-202ENST00000396610 ABCA3Q99758 1704 aa-1.41□□□□□ -2.64
CMC1-202ENST00000396610 CFAP46Q8IYW2 2715 aa-1.41□□□□□ -2.64
CMC1-202ENST00000396610 ANKRD50Q9ULJ7 1429 aa-1.41□□□□□ -2.64
CMC1-202ENST00000396610 C9orf92A6NGG3 77 aa-1.42□□□□□ -2.64
CMC1-202ENST00000396610 CICQ96RK0 1608 aaPredicted RBP-1.42□□□□□ -2.64
CMC1-202ENST00000396610 COL6A5A8TX70 2615 aa-1.43□□□□□ -2.64
CMC1-202ENST00000396610 C14orf144Q96I85 54 aa-1.43□□□□□ -2.64
CMC1-202ENST00000396610 BPTFQ12830 3046 aa-1.43□□□□□ -2.64
CMC1-202ENST00000396610 H0YAA0 97 aa-1.44□□□□□ -2.64
CMC1-202ENST00000396610 MON2Q7Z3U7 1717 aa-1.44□□□□□ -2.64
CMC1-202ENST00000396610 COX7BP24311 80 aa-1.45□□□□□ -2.64
CMC1-202ENST00000396610 COX6B2Q6YFQ2 88 aa-1.45□□□□□ -2.64
CMC1-202ENST00000396610 DPY30Q9C005 99 aa-1.45□□□□□ -2.64
CMC1-202ENST00000396610 K7EP34 96 aa-1.46□□□□□ -2.64
CMC1-202ENST00000396610 DEFB1P60022 68 aa-1.46□□□□□ -2.64
CMC1-202ENST00000396610 TCEAL7Q9BRU2 100 aa-1.46□□□□□ -2.64
CMC1-202ENST00000396610 MAGI2Q86UL8 1455 aa-1.46□□□□□ -2.64
CMC1-202ENST00000396610 C5P01031 1676 aa-1.46□□□□□ -2.64
CMC1-202ENST00000396610 RANBP2P49792 3224 aaKnown RBP-1.47□□□□□ -2.64
CMC1-202ENST00000396610 SPTAN1Q13813 2472 aaKnown RBP-1.47□□□□□ -2.64
CMC1-202ENST00000396610 NDUFA3O95167 84 aa-1.47□□□□□ -2.64
CMC1-202ENST00000396610 UBE2D4Q9Y2X8 147 aa-1.47□□□□□ -2.64
CMC1-202ENST00000396610 RGPD2P0DJD1 1756 aa-1.49□□□□□ -2.65
CMC1-202ENST00000396610 BCORQ6W2J9 1755 aa-1.49□□□□□ -2.65
CMC1-202ENST00000396610 RPL38P63173 70 aaKnown RBP-1.49□□□□□ -2.65
CMC1-202ENST00000396610 DEFB110Q30KQ9 67 aa-1.49□□□□□ -2.65
CMC1-202ENST00000396610 S4R3F8 94 aa-1.49□□□□□ -2.65
CMC1-202ENST00000396610 SPTBN5Q9NRC6 3674 aaKnown RBP-1.5□□□□□ -2.65
CMC1-202ENST00000396610 TEX14Q8IWB6 1497 aa-1.5□□□□□ -2.65
CMC1-202ENST00000396610 ATP6V1G2-DDX39BF2Z307 99 aa-1.5□□□□□ -2.65
CMC1-202ENST00000396610 KIF20BQ96Q89 1820 aa-1.5□□□□□ -2.65
CMC1-202ENST00000396610 FYCO1Q9BQS8 1478 aa-1.5□□□□□ -2.65
CMC1-202ENST00000396610 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.51□□□□□ -2.65
CMC1-202ENST00000396610 CSMD1Q96PZ7 3565 aa-1.51□□□□□ -2.65
CMC1-202ENST00000396610 MT1XP80297 61 aa-1.51□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms