RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 TLX1NBP0CAT3 122 aa7.83□□□□□ -1.16
VCPKMT-201ENST00000395859 CFC1BP0CG36 223 aa7.83□□□□□ -1.16
VCPKMT-201ENST00000395859 HINT1P49773 126 aaPredicted RBP7.83□□□□□ -1.16
VCPKMT-201ENST00000395859 RPL24P83731 157 aaKnown RBP7.83□□□□□ -1.16
VCPKMT-201ENST00000395859 FAM19A5Q7Z5A7 132 aaPredicted RBP7.83□□□□□ -1.16
VCPKMT-201ENST00000395859 ZNF625Q96I27 306 aaPredicted RBP7.83□□□□□ -1.16
VCPKMT-201ENST00000395859 PRSS2P07478 247 aa7.82□□□□□ -1.16
VCPKMT-201ENST00000395859 KRTAP10-6P60371 365 aaPredicted RBP7.82□□□□□ -1.16
VCPKMT-201ENST00000395859 TTTY13Q9BZ97 58 aa7.82□□□□□ -1.16
VCPKMT-201ENST00000395859 USH2AO75445 5202 aa7.81□□□□□ -1.16
VCPKMT-201ENST00000395859 A0A1B0GWB2 263 aa7.81□□□□□ -1.16
VCPKMT-201ENST00000395859 COX17Q14061 63 aa7.81□□□□□ -1.16
VCPKMT-201ENST00000395859 FLGP20930 4061 aaPredicted RBP7.81□□□□□ -1.16
VCPKMT-201ENST00000395859 M0QXV9 152 aa7.8□□□□□ -1.16
VCPKMT-201ENST00000395859 SMIM13P0DJ93 91 aa7.8□□□□□ -1.16
VCPKMT-201ENST00000395859 BATFQ16520 125 aa7.8□□□□□ -1.16
VCPKMT-201ENST00000395859 C6orf226Q5I0X4 101 aa7.8□□□□□ -1.16
VCPKMT-201ENST00000395859 UBE2BP63146 152 aa7.79□□□□□ -1.16
VCPKMT-201ENST00000395859 KRTAP13-3Q3SY46 172 aa7.79□□□□□ -1.16
VCPKMT-201ENST00000395859 LINC00304Q8N9R0 145 aa7.79□□□□□ -1.16
VCPKMT-201ENST00000395859 CKS1BP61024 79 aa7.77□□□□□ -1.17
VCPKMT-201ENST00000395859 C10orf25Q5T742 122 aa7.77□□□□□ -1.17
VCPKMT-201ENST00000395859 LITAFQ99732 161 aa7.77□□□□□ -1.17
VCPKMT-201ENST00000395859 A0A0B4J2C4 111 aa7.76□□□□□ -1.17
VCPKMT-201ENST00000395859 MEIG1Q5JSS6 88 aa7.76□□□□□ -1.17
VCPKMT-201ENST00000395859 ANAPC11Q9NYG5 84 aa7.76□□□□□ -1.17
VCPKMT-201ENST00000395859 TRBV30A0A0K0K1B3 111 aa7.75□□□□□ -1.17
VCPKMT-201ENST00000395859 FXYD2P54710 66 aa7.75□□□□□ -1.17
VCPKMT-201ENST00000395859 UNQ6190/PRO20217Q6UXQ8 127 aa7.75□□□□□ -1.17
VCPKMT-201ENST00000395859 FCGBPQ9Y6R7 5405 aaPredicted RBP7.75□□□□□ -1.17
VCPKMT-201ENST00000395859 LOC107984156A0A0G2JMH3 177 aa7.74□□□□□ -1.17
VCPKMT-201ENST00000395859 C9orf118A6NHY6 69 aa7.74□□□□□ -1.17
VCPKMT-201ENST00000395859 SEC61BP60468 96 aaKnown RBP7.74□□□□□ -1.17
VCPKMT-201ENST00000395859 KIAA0087Q14695 138 aa7.74□□□□□ -1.17
VCPKMT-201ENST00000395859 C9orf129Q5T035 196 aaKnown RBP7.74□□□□□ -1.17
VCPKMT-201ENST00000395859 LYRM7Q5U5X0 104 aa7.74□□□□□ -1.17
VCPKMT-201ENST00000395859 ARL17AQ8IVW1 177 aa7.74□□□□□ -1.17
VCPKMT-201ENST00000395859 TOMM7Q9P0U1 55 aa7.74□□□□□ -1.17
VCPKMT-201ENST00000395859 C6orf48Q9UBA6 75 aa7.74□□□□□ -1.17
VCPKMT-201ENST00000395859 TAX1BP3O14907 124 aa7.73□□□□□ -1.17
VCPKMT-201ENST00000395859 GAGE2EQ4V326 116 aa7.73□□□□□ -1.17
VCPKMT-201ENST00000395859 NHP2Q9NX24 153 aaKnown RBP7.73□□□□□ -1.17
VCPKMT-201ENST00000395859 GAGE2DQ9UEU5 116 aa7.73□□□□□ -1.17
VCPKMT-201ENST00000395859 FAM229BQ4G0N7 80 aa7.72□□□□□ -1.17
VCPKMT-201ENST00000395859 FP248Q71RG6 208 aaPredicted RBP7.72□□□□□ -1.17
VCPKMT-201ENST00000395859 MUSTN1Q8IVN3 82 aa7.72□□□□□ -1.17
VCPKMT-201ENST00000395859 PRO1854Q9UHT4 67 aa7.72□□□□□ -1.17
VCPKMT-201ENST00000395859 ERG28Q9UKR5 140 aa7.72□□□□□ -1.17
VCPKMT-201ENST00000395859 NDUFC2-KCTD14E9PQ53 114 aa7.71□□□□□ -1.18
VCPKMT-201ENST00000395859 ADAMTSL4-AS1Q5T5F5 129 aa7.71□□□□□ -1.18
VCPKMT-201ENST00000395859 LINC00308Q8TCZ7 52 aa7.71□□□□□ -1.18
VCPKMT-201ENST00000395859 A4D1N5 150 aa7.7□□□□□ -1.18
VCPKMT-201ENST00000395859 LINC00337Q8N6G1 96 aa7.7□□□□□ -1.18
VCPKMT-201ENST00000395859 RAB37Q96AX2 223 aa7.7□□□□□ -1.18
VCPKMT-201ENST00000395859 NDUFC2O95298 119 aa7.69□□□□□ -1.18
VCPKMT-201ENST00000395859 CFC1P0CG37 223 aa7.69□□□□□ -1.18
VCPKMT-201ENST00000395859 RPL28P46779 137 aaKnown RBP7.69□□□□□ -1.18
VCPKMT-201ENST00000395859 LINC00158P58513 81 aa7.69□□□□□ -1.18
VCPKMT-201ENST00000395859 GTF2H5Q6ZYL4 71 aa7.69□□□□□ -1.18
VCPKMT-201ENST00000395859 FABP2P12104 132 aa7.68□□□□□ -1.18
VCPKMT-201ENST00000395859 C2orf82Q6UX34 121 aa7.68□□□□□ -1.18
VCPKMT-201ENST00000395859 KRTAP13-1Q8IUC0 172 aa7.68□□□□□ -1.18
VCPKMT-201ENST00000395859 SYNE2Q8WXH0 6885 aaKnown RBP7.67□□□□□ -1.18
VCPKMT-201ENST00000395859 TRAV13-2A0A0B4J235 113 aa7.67□□□□□ -1.18
VCPKMT-201ENST00000395859 A0A1B0GV90 55 aa7.67□□□□□ -1.18
VCPKMT-201ENST00000395859 A0A1W2PPM0 123 aa7.67□□□□□ -1.18
VCPKMT-201ENST00000395859 BCE1O60756 84 aa7.67□□□□□ -1.18
VCPKMT-201ENST00000395859 MIR7-3HGQ8N6C7 128 aa7.67□□□□□ -1.18
VCPKMT-201ENST00000395859 TRBV20-1A0A075B6N2 111 aa7.66□□□□□ -1.18
VCPKMT-201ENST00000395859 C22orf24Q9Y442 160 aa7.66□□□□□ -1.18
VCPKMT-201ENST00000395859 COX6CP09669 75 aa7.65□□□□□ -1.18
VCPKMT-201ENST00000395859 SND1-IT1Q9HBX3 110 aa7.65□□□□□ -1.18
VCPKMT-201ENST00000395859 CBY1Q9Y3M2 126 aa7.65□□□□□ -1.18
VCPKMT-201ENST00000395859 MACF1Q9UPN3 7388 aaKnown RBP7.64□□□□□ -1.19
VCPKMT-201ENST00000395859 H3BUT2 72 aa7.64□□□□□ -1.19
VCPKMT-201ENST00000395859 UBE2V1Q13404 147 aa7.64□□□□□ -1.19
VCPKMT-201ENST00000395859 VAMP3Q15836 100 aa7.64□□□□□ -1.19
VCPKMT-201ENST00000395859 C4orf48Q5BLP8 95 aa7.64□□□□□ -1.19
VCPKMT-201ENST00000395859 PFN2P35080 140 aa7.63□□□□□ -1.19
VCPKMT-201ENST00000395859 TRBV10-2A0A0K0K1G8 114 aa7.62□□□□□ -1.19
VCPKMT-201ENST00000395859 GAGE10A6NGK3 116 aa7.62□□□□□ -1.19
VCPKMT-201ENST00000395859 K7ERJ3 54 aa7.62□□□□□ -1.19
VCPKMT-201ENST00000395859 XP32Q5T750 250 aa7.62□□□□□ -1.19
VCPKMT-201ENST00000395859 K7EP34 96 aa7.61□□□□□ -1.19
VCPKMT-201ENST00000395859 SOSTDC1Q6X4U4 206 aa7.61□□□□□ -1.19
VCPKMT-201ENST00000395859 DAND5Q8N907 189 aa7.61□□□□□ -1.19
VCPKMT-201ENST00000395859 SPCS1Q9Y6A9 102 aa7.6□□□□□ -1.19
VCPKMT-201ENST00000395859 A0A0U1RRA0 63 aa7.59□□□□□ -1.19
VCPKMT-201ENST00000395859 TMEM126AQ9H061 195 aa7.59□□□□□ -1.19
VCPKMT-201ENST00000395859 XAGE1AQ9HD64 81 aa7.59□□□□□ -1.19
VCPKMT-201ENST00000395859 PSMB2P49721 201 aa7.58□□□□□ -1.2
VCPKMT-201ENST00000395859 Q1RN00 199 aa7.58□□□□□ -1.2
VCPKMT-201ENST00000395859 SPAG11AQ6PDA7 123 aa7.58□□□□□ -1.2
VCPKMT-201ENST00000395859 C3orf22Q8N5N4 141 aa7.58□□□□□ -1.2
VCPKMT-201ENST00000395859 MRPL55Q7Z7F7 128 aaKnown RBP7.57□□□□□ -1.2
VCPKMT-201ENST00000395859 F8W1H4 67 aa7.56□□□□□ -1.2
VCPKMT-201ENST00000395859 H0YGX0 51 aa7.56□□□□□ -1.2
VCPKMT-201ENST00000395859 SCGB1C2P0DMR2 95 aa7.56□□□□□ -1.2
VCPKMT-201ENST00000395859 NPC2P61916 151 aa7.56□□□□□ -1.2
VCPKMT-201ENST00000395859 IGKV2-28A0A075B6P5 120 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms