RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 ANAPC11Q9NYG5 84 aa6.8□□□□□ -1.32
COL4A6-203ENST00000394872 CEP295Q9C0D2 2601 aa6.8□□□□□ -1.32
COL4A6-203ENST00000394872 SETD2Q9BYW2 2564 aaPredicted RBP6.8□□□□□ -1.32
COL4A6-203ENST00000394872 C9orf163Q8N9P6 203 aa6.8□□□□□ -1.32
COL4A6-203ENST00000394872 A0A1B0GVX0 72 aa6.79□□□□□ -1.32
COL4A6-203ENST00000394872 IGLV7-43P04211 117 aa6.79□□□□□ -1.32
COL4A6-203ENST00000394872 APLNQ9ULZ1 77 aa6.79□□□□□ -1.32
COL4A6-203ENST00000394872 PRR15Q8IV56 129 aa6.79□□□□□ -1.32
COL4A6-203ENST00000394872 CYP4F30PQ9H0H9 118 aa6.78□□□□□ -1.32
COL4A6-203ENST00000394872 TLX1NBP0CAT3 122 aa6.78□□□□□ -1.32
COL4A6-203ENST00000394872 Q8N377 158 aa6.78□□□□□ -1.32
COL4A6-203ENST00000394872 USP9YO00507 2555 aaPredicted RBP6.78□□□□□ -1.32
COL4A6-203ENST00000394872 A0A0G2JQZ4 141 aa6.77□□□□□ -1.32
COL4A6-203ENST00000394872 A0A1W2PNN7 141 aa6.77□□□□□ -1.32
COL4A6-203ENST00000394872 PLA2G2DQ9UNK4 145 aa6.77□□□□□ -1.32
COL4A6-203ENST00000394872 CENPFP49454 3210 aa6.77□□□□□ -1.33
COL4A6-203ENST00000394872 ERC2-IT1O76042 136 aa6.77□□□□□ -1.33
COL4A6-203ENST00000394872 LINC00612Q8N6U2 182 aa6.77□□□□□ -1.33
COL4A6-203ENST00000394872 SPTBN4Q9H254 2564 aa6.77□□□□□ -1.33
COL4A6-203ENST00000394872 IGLV5-37A0A075B6J1 123 aa6.76□□□□□ -1.33
COL4A6-203ENST00000394872 PSORS1C2Q9UIG4 136 aa6.76□□□□□ -1.33
COL4A6-203ENST00000394872 PKD1L2Q7Z442 2459 aa6.76□□□□□ -1.33
COL4A6-203ENST00000394872 RBM12B-AS1Q9P1G2 102 aa6.75□□□□□ -1.33
COL4A6-203ENST00000394872 UQCR11O14957 56 aa6.75□□□□□ -1.33
COL4A6-203ENST00000394872 CASC10Q5T4H9 136 aa6.75□□□□□ -1.33
COL4A6-203ENST00000394872 CHD8Q9HCK8 2581 aa6.75□□□□□ -1.33
COL4A6-203ENST00000394872 EIF4EBP3O60516 100 aaPredicted RBP6.75□□□□□ -1.33
COL4A6-203ENST00000394872 KTN1-AS1Q86SY8 53 aa6.75□□□□□ -1.33
COL4A6-203ENST00000394872 ZNF575Q86XF7 245 aa6.74□□□□□ -1.33
COL4A6-203ENST00000394872 KRTAP1-3Q8IUG1 177 aa6.74□□□□□ -1.33
COL4A6-203ENST00000394872 LCA10Q71F78 164 aa6.72□□□□□ -1.33
COL4A6-203ENST00000394872 MTORP42345 2549 aa6.72□□□□□ -1.33
COL4A6-203ENST00000394872 SPRR4Q96PI1 79 aa6.72□□□□□ -1.33
COL4A6-203ENST00000394872 CNBPP62633 177 aaKnown RBP6.71□□□□□ -1.33
COL4A6-203ENST00000394872 MIR22HGQ0VDD5 57 aa6.7□□□□□ -1.34
COL4A6-203ENST00000394872 CRIPTQ9P021 101 aa6.7□□□□□ -1.34
COL4A6-203ENST00000394872 POLQO75417 2590 aa6.7□□□□□ -1.34
COL4A6-203ENST00000394872 ACANP16112 2415 aa6.7□□□□□ -1.34
COL4A6-203ENST00000394872 KRTAP1-1Q07627 177 aa6.69□□□□□ -1.34
COL4A6-203ENST00000394872 FASNP49327 2511 aaKnown RBP6.67□□□□□ -1.34
COL4A6-203ENST00000394872 F8P00451 2351 aa6.67□□□□□ -1.34
COL4A6-203ENST00000394872 LINC01554Q52M75 96 aa6.67□□□□□ -1.34
COL4A6-203ENST00000394872 KLKP1Q107X0 134 aa6.66□□□□□ -1.34
COL4A6-203ENST00000394872 TNP2Q05952 138 aa6.65□□□□□ -1.34
COL4A6-203ENST00000394872 H7BZZ5 65 aa6.64□□□□□ -1.35
COL4A6-203ENST00000394872 Q8N1X5 172 aa6.64□□□□□ -1.35
COL4A6-203ENST00000394872 GOLGB1Q14789 3259 aaKnown RBP6.63□□□□□ -1.35
COL4A6-203ENST00000394872 IGLV5-48A0A075B6I7 105 aa6.63□□□□□ -1.35
COL4A6-203ENST00000394872 A0A1W2PNM2 257 aa6.62□□□□□ -1.35
COL4A6-203ENST00000394872 A0A0D9SG42 100 aa6.62□□□□□ -1.35
COL4A6-203ENST00000394872 Q6ZSA8 131 aa6.61□□□□□ -1.35
COL4A6-203ENST00000394872 FAM104AQ969W3 186 aa6.6□□□□□ -1.35
COL4A6-203ENST00000394872 IGLV7-46A0A075B6I9 117 aa6.58□□□□□ -1.36
COL4A6-203ENST00000394872 WIPF1O43516 503 aa6.57□□□□□ -1.36
COL4A6-203ENST00000394872 PRR26Q8N8Z3 221 aa6.57□□□□□ -1.36
COL4A6-203ENST00000394872 CDC42SE1Q9NRR8 79 aa6.56□□□□□ -1.36
COL4A6-203ENST00000394872 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.56□□□□□ -1.36
COL4A6-203ENST00000394872 SPANXA2-OT1Q8N9U9 137 aa6.55□□□□□ -1.36
COL4A6-203ENST00000394872 M0R2T5 61 aa6.54□□□□□ -1.36
COL4A6-203ENST00000394872 H3BS24 57 aa6.52□□□□□ -1.37
COL4A6-203ENST00000394872 Q1T7F1 81 aa6.48□□□□□ -1.37
COL4A6-203ENST00000394872 FAM229BQ4G0N7 80 aa6.47□□□□□ -1.37
COL4A6-203ENST00000394872 CAMK2N1Q7Z7J9 78 aa6.46□□□□□ -1.38
COL4A6-203ENST00000394872 PLAC8Q9NZF1 115 aa6.45□□□□□ -1.38
COL4A6-203ENST00000394872 EPG5Q9HCE0 2579 aa6.45□□□□□ -1.38
COL4A6-203ENST00000394872 CR1P17927 2039 aa6.44□□□□□ -1.38
COL4A6-203ENST00000394872 HECTD1Q9ULT8 2610 aa6.43□□□□□ -1.38
COL4A6-203ENST00000394872 LUZP6Q538Z0 58 aa6.43□□□□□ -1.38
COL4A6-203ENST00000394872 OCR1Q9BZK8 76 aa6.43□□□□□ -1.38
COL4A6-203ENST00000394872 HRES1P13985 223 aa6.42□□□□□ -1.38
COL4A6-203ENST00000394872 Q5XG85 94 aa6.41□□□□□ -1.38
COL4A6-203ENST00000394872 A0A1B0GU33 70 aa6.4□□□□□ -1.38
COL4A6-203ENST00000394872 ZCCHC13Q8WW36 166 aaKnown RBP6.4□□□□□ -1.38
COL4A6-203ENST00000394872 S4R3F8 94 aa6.4□□□□□ -1.39
COL4A6-203ENST00000394872 USP24Q9UPU5 2620 aa6.39□□□□□ -1.39
COL4A6-203ENST00000394872 DNAH12Q6ZR08 3092 aa6.38□□□□□ -1.39
COL4A6-203ENST00000394872 Q75L30 129 aa6.38□□□□□ -1.39
COL4A6-203ENST00000394872 MGAM2Q2M2H8 2515 aa6.37□□□□□ -1.39
COL4A6-203ENST00000394872 LINC00483Q53H64 154 aa6.37□□□□□ -1.39
COL4A6-203ENST00000394872 Q5VSD8 79 aa6.37□□□□□ -1.39
COL4A6-203ENST00000394872 CSAG1Q6PB30 78 aa6.37□□□□□ -1.39
COL4A6-203ENST00000394872 PRAC1Q96KF2 57 aa6.36□□□□□ -1.39
COL4A6-203ENST00000394872 MMP24-AS1A0A0U1RRL7 71 aa6.36□□□□□ -1.39
COL4A6-203ENST00000394872 FLNBO75369 2602 aaKnown RBP6.35□□□□□ -1.39
COL4A6-203ENST00000394872 BPTFQ12830 3046 aa6.35□□□□□ -1.39
COL4A6-203ENST00000394872 SPRR1AP35321 89 aa6.33□□□□□ -1.4
COL4A6-203ENST00000394872 Q8N9P0 234 aaPredicted RBP6.33□□□□□ -1.4
COL4A6-203ENST00000394872 SEC61BP60468 96 aaKnown RBP6.32□□□□□ -1.4
COL4A6-203ENST00000394872 Q8NDZ9 215 aa6.32□□□□□ -1.4
COL4A6-203ENST00000394872 UTRNP46939 3433 aa6.32□□□□□ -1.4
COL4A6-203ENST00000394872 LCE6AA0A183 80 aa6.32□□□□□ -1.4
COL4A6-203ENST00000394872 FP248Q71RG6 208 aaPredicted RBP6.31□□□□□ -1.4
COL4A6-203ENST00000394872 KRTAP1-5Q9BYS1 174 aa6.3□□□□□ -1.4
COL4A6-203ENST00000394872 FLNAP21333 2647 aaKnown RBP6.3□□□□□ -1.4
COL4A6-203ENST00000394872 DMAC1Q96GE9 116 aa6.3□□□□□ -1.4
COL4A6-203ENST00000394872 Q5W150 140 aa6.3□□□□□ -1.4
COL4A6-203ENST00000394872 KRTAP10-1P60331 282 aa6.29□□□□□ -1.4
COL4A6-203ENST00000394872 SPINK7P58062 85 aa6.29□□□□□ -1.4
COL4A6-203ENST00000394872 ITPR3Q14573 2671 aa6.28□□□□□ -1.4
COL4A6-203ENST00000394872 CYSTM1Q9H1C7 97 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms