RNA–Protein interactions for RNA: ENST00000392869.6

GTDC1-204, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GTDC1, Length 10,514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-204ENST00000392869 Q8N377 158 aa4.05□□□□□ -1.76
GTDC1-204ENST00000392869 Q8NAQ8 132 aa4.05□□□□□ -1.76
GTDC1-204ENST00000392869 HIVEP3Q5T1R4 2406 aa4.04□□□□□ -1.76
GTDC1-204ENST00000392869 WDR87Q6ZQQ6 2873 aa4.04□□□□□ -1.76
GTDC1-204ENST00000392869 F8P00451 2351 aa4.04□□□□□ -1.76
GTDC1-204ENST00000392869 COL4A2P08572 1712 aa4.04□□□□□ -1.76
GTDC1-204ENST00000392869 LRRK2Q5S007 2527 aa4.03□□□□□ -1.76
GTDC1-204ENST00000392869 FAM229BQ4G0N7 80 aa4.02□□□□□ -1.77
GTDC1-204ENST00000392869 H3BS24 57 aa4.01□□□□□ -1.77
GTDC1-204ENST00000392869 KRTAP10-9P60411 292 aa4.01□□□□□ -1.77
GTDC1-204ENST00000392869 CACNA1AO00555 2505 aa4.01□□□□□ -1.77
GTDC1-204ENST00000392869 WWC2-AS2Q96NR7 200 aa4.01□□□□□ -1.77
GTDC1-204ENST00000392869 PIEZO2Q9H5I5 2752 aa4.01□□□□□ -1.77
GTDC1-204ENST00000392869 NCOR2Q9Y618 2525 aa4.01□□□□□ -1.77
GTDC1-204ENST00000392869 C2CD3Q4AC94 2353 aa4□□□□□ -1.77
GTDC1-204ENST00000392869 MYO9AB2RTY4 2548 aa4□□□□□ -1.77
GTDC1-204ENST00000392869 NAV2Q8IVL1 2488 aa3.99□□□□□ -1.77
GTDC1-204ENST00000392869 J3QL48 77 aa3.99□□□□□ -1.77
GTDC1-204ENST00000392869 DSCR10P59022 87 aa3.99□□□□□ -1.77
GTDC1-204ENST00000392869 LINC00612Q8N6U2 182 aa3.99□□□□□ -1.77
GTDC1-204ENST00000392869 PSORS1C2Q9UIG4 136 aa3.98□□□□□ -1.77
GTDC1-204ENST00000392869 Q8N9P0 234 aaPredicted RBP3.98□□□□□ -1.77
GTDC1-204ENST00000392869 NOTCH2Q04721 2471 aa3.98□□□□□ -1.77
GTDC1-204ENST00000392869 ROMO1P60602 79 aa3.97□□□□□ -1.77
GTDC1-204ENST00000392869 CSAG1Q6PB30 78 aa3.97□□□□□ -1.77
GTDC1-204ENST00000392869 KRTAP16-1A8MUX0 517 aa3.97□□□□□ -1.77
GTDC1-204ENST00000392869 A0A1W2PPR1 153 aa3.96□□□□□ -1.78
GTDC1-204ENST00000392869 CCDC168Q8NDH2 2452 aa3.96□□□□□ -1.78
GTDC1-204ENST00000392869 REV3LO60673 3130 aa3.96□□□□□ -1.78
GTDC1-204ENST00000392869 MYO18BQ8IUG5 2567 aa3.95□□□□□ -1.78
GTDC1-204ENST00000392869 ANKRD17O75179 2603 aaKnown RBP3.94□□□□□ -1.78
GTDC1-204ENST00000392869 IGF2RP11717 2491 aa3.94□□□□□ -1.78
GTDC1-204ENST00000392869 RPL37P61927 97 aaKnown RBP3.94□□□□□ -1.78
GTDC1-204ENST00000392869 Q6ZSA8 131 aa3.93□□□□□ -1.78
GTDC1-204ENST00000392869 Q5XG85 94 aa3.93□□□□□ -1.78
GTDC1-204ENST00000392869 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.93□□□□□ -1.78
GTDC1-204ENST00000392869 A0A1W2PNM2 257 aa3.92□□□□□ -1.78
GTDC1-204ENST00000392869 SPINK7P58062 85 aa3.92□□□□□ -1.78
GTDC1-204ENST00000392869 A0A087WTM6 91 aa3.92□□□□□ -1.78
GTDC1-204ENST00000392869 SZT2Q5T011 3432 aa3.91□□□□□ -1.78
GTDC1-204ENST00000392869 Q5VV11 94 aa3.91□□□□□ -1.78
GTDC1-204ENST00000392869 C19orf73Q9NVV2 129 aa3.91□□□□□ -1.78
GTDC1-204ENST00000392869 S4R3F8 94 aa3.91□□□□□ -1.78
GTDC1-204ENST00000392869 FAM168BA1KXE4 195 aa3.91□□□□□ -1.78
GTDC1-204ENST00000392869 SEC61BP60468 96 aaKnown RBP3.91□□□□□ -1.78
GTDC1-204ENST00000392869 A0A0D9SG42 100 aa3.9□□□□□ -1.78
GTDC1-204ENST00000392869 ZNF575Q86XF7 245 aa3.9□□□□□ -1.78
GTDC1-204ENST00000392869 EP400Q96L91 3159 aa3.9□□□□□ -1.78
GTDC1-204ENST00000392869 CR1P17927 2039 aa3.9□□□□□ -1.78
GTDC1-204ENST00000392869 ZCCHC13Q8WW36 166 aaKnown RBP3.9□□□□□ -1.79
GTDC1-204ENST00000392869 R4GN34 69 aa3.89□□□□□ -1.79
GTDC1-204ENST00000392869 SPRR1BP22528 89 aa3.89□□□□□ -1.79
GTDC1-204ENST00000392869 TLN1Q9Y490 2541 aaKnown RBP3.89□□□□□ -1.79
GTDC1-204ENST00000392869 ZFYVE26Q68DK2 2539 aa3.88□□□□□ -1.79
GTDC1-204ENST00000392869 ABCA12Q86UK0 2595 aa3.87□□□□□ -1.79
GTDC1-204ENST00000392869 FN1P02751 2386 aaKnown RBP3.86□□□□□ -1.79
GTDC1-204ENST00000392869 FP248Q71RG6 208 aaPredicted RBP3.86□□□□□ -1.79
GTDC1-204ENST00000392869 PRR26Q8N8Z3 221 aa3.86□□□□□ -1.79
GTDC1-204ENST00000392869 SPRR1AP35321 89 aa3.86□□□□□ -1.79
GTDC1-204ENST00000392869 CHD8Q9HCK8 2581 aa3.86□□□□□ -1.79
GTDC1-204ENST00000392869 ANKRD11Q6UB99 2663 aaPredicted RBP3.85□□□□□ -1.79
GTDC1-204ENST00000392869 Q6ZR54 194 aa3.85□□□□□ -1.79
GTDC1-204ENST00000392869 Q8N1X5 172 aa3.85□□□□□ -1.79
GTDC1-204ENST00000392869 MMP24-AS1A0A0U1RRL7 71 aa3.85□□□□□ -1.79
GTDC1-204ENST00000392869 C9orf92A6NGG3 77 aa3.85□□□□□ -1.79
GTDC1-204ENST00000392869 DOPEY1Q5JWR5 2465 aa3.85□□□□□ -1.79
GTDC1-204ENST00000392869 KRTAP24-1Q3LI83 254 aa3.84□□□□□ -1.79
GTDC1-204ENST00000392869 GIG44P09565 113 aaPredicted RBP3.84□□□□□ -1.8
GTDC1-204ENST00000392869 TLN2Q9Y4G6 2542 aa3.83□□□□□ -1.8
GTDC1-204ENST00000392869 LINC00472Q9H8W2 130 aa3.83□□□□□ -1.8
GTDC1-204ENST00000392869 SPTBN4Q9H254 2564 aa3.83□□□□□ -1.8
GTDC1-204ENST00000392869 SPATA8Q6RVD6 105 aa3.83□□□□□ -1.8
GTDC1-204ENST00000392869 H1FX-AS1Q4G0G2 97 aa3.83□□□□□ -1.8
GTDC1-204ENST00000392869 RPS29P62273 56 aaKnown RBP3.82□□□□□ -1.8
GTDC1-204ENST00000392869 SRCAPQ6ZRS2 3230 aa3.82□□□□□ -1.8
GTDC1-204ENST00000392869 M0QZ58 72 aa3.82□□□□□ -1.8
GTDC1-204ENST00000392869 PLAC8Q9NZF1 115 aa3.81□□□□□ -1.8
GTDC1-204ENST00000392869 PKD1L2Q7Z442 2459 aa3.8□□□□□ -1.8
GTDC1-204ENST00000392869 MTORP42345 2549 aa3.8□□□□□ -1.8
GTDC1-204ENST00000392869 JMJD1CQ15652 2540 aa3.8□□□□□ -1.8
GTDC1-204ENST00000392869 Q5W150 140 aa3.8□□□□□ -1.8
GTDC1-204ENST00000392869 ZNF462Q96JM2 2506 aa3.79□□□□□ -1.8
GTDC1-204ENST00000392869 FASNP49327 2511 aaKnown RBP3.79□□□□□ -1.8
GTDC1-204ENST00000392869 A0A1W2PNN7 141 aa3.78□□□□□ -1.8
GTDC1-204ENST00000392869 PLAC4Q8WY50 150 aa3.78□□□□□ -1.8
GTDC1-204ENST00000392869 USP34Q70CQ2 3546 aa3.78□□□□□ -1.8
GTDC1-204ENST00000392869 USP9XQ93008 2570 aaPredicted RBP3.78□□□□□ -1.8
GTDC1-204ENST00000392869 KRTAP25-1Q3LHN0 102 aa3.78□□□□□ -1.8
GTDC1-204ENST00000392869 PP632Q6XCG6 107 aa3.78□□□□□ -1.8
GTDC1-204ENST00000392869 KRTAP10-11P60412 298 aa3.77□□□□□ -1.81
GTDC1-204ENST00000392869 SETD2Q9BYW2 2564 aaPredicted RBP3.77□□□□□ -1.81
GTDC1-204ENST00000392869 M0R2T5 61 aa3.75□□□□□ -1.81
GTDC1-204ENST00000392869 FLG2Q5D862 2391 aaPredicted RBP3.75□□□□□ -1.81
GTDC1-204ENST00000392869 K7EIL1 84 aa3.75□□□□□ -1.81
GTDC1-204ENST00000392869 ANAPC11Q9NYG5 84 aa3.73□□□□□ -1.81
GTDC1-204ENST00000392869 ZFHX3Q15911 3703 aa3.73□□□□□ -1.81
GTDC1-204ENST00000392869 OXTP01178 125 aa3.73□□□□□ -1.81
GTDC1-204ENST00000392869 CEP295Q9C0D2 2601 aa3.73□□□□□ -1.81
GTDC1-204ENST00000392869 ACANP16112 2415 aa3.73□□□□□ -1.81
GTDC1-204ENST00000392869 CENPFP49454 3210 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms