RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 LRCOL1A6NCL2 159 aa9.81□□□□□ -0.84
VPS9D1-201ENST00000389386 ZNF73O43830 326 aaPredicted RBP9.79□□□□□ -0.84
VPS9D1-201ENST00000389386 LINC00612Q8N6U2 182 aa9.79□□□□□ -0.84
VPS9D1-201ENST00000389386 A0A0J9YWU9 116 aa9.79□□□□□ -0.84
VPS9D1-201ENST00000389386 IGHV4-30-4P0DP06 118 aa9.79□□□□□ -0.84
VPS9D1-201ENST00000389386 ELOF1P60002 83 aaKnown RBP9.78□□□□□ -0.84
VPS9D1-201ENST00000389386 C1orf64Q8NEQ6 169 aa9.78□□□□□ -0.84
VPS9D1-201ENST00000389386 DEFB130BP0DP73 79 aa9.78□□□□□ -0.84
VPS9D1-201ENST00000389386 DEFB130AP0DP74 79 aa9.78□□□□□ -0.84
VPS9D1-201ENST00000389386 MRPL55Q7Z7F7 128 aaKnown RBP9.78□□□□□ -0.84
VPS9D1-201ENST00000389386 LCE6AA0A183 80 aa9.77□□□□□ -0.84
VPS9D1-201ENST00000389386 A0A096LPF7 62 aa9.77□□□□□ -0.85
VPS9D1-201ENST00000389386 CELA1Q9UNI1 258 aa9.77□□□□□ -0.85
VPS9D1-201ENST00000389386 REG3AQ06141 175 aa9.76□□□□□ -0.85
VPS9D1-201ENST00000389386 SPAG11BQ08648 103 aa9.76□□□□□ -0.85
VPS9D1-201ENST00000389386 PKD1L1Q8TDX9 2849 aa9.76□□□□□ -0.85
VPS9D1-201ENST00000389386 FAM30AQ9NZY2 134 aa9.76□□□□□ -0.85
VPS9D1-201ENST00000389386 KLK12Q9UKR0 248 aa9.75□□□□□ -0.85
VPS9D1-201ENST00000389386 ANGP03950 147 aaKnown RBP9.75□□□□□ -0.85
VPS9D1-201ENST00000389386 SMIM29Q86T20 159 aa9.74□□□□□ -0.85
VPS9D1-201ENST00000389386 PSPHP1O15172 72 aa9.73□□□□□ -0.85
VPS9D1-201ENST00000389386 CMC4P56277 68 aaPredicted RBP9.73□□□□□ -0.85
VPS9D1-201ENST00000389386 HIGD2BQ4VC39 106 aa9.73□□□□□ -0.85
VPS9D1-201ENST00000389386 XAGE1AQ9HD64 81 aa9.73□□□□□ -0.85
VPS9D1-201ENST00000389386 TRAV22A0A0B4J277 110 aa9.72□□□□□ -0.85
VPS9D1-201ENST00000389386 C4orf48Q5BLP8 95 aa9.72□□□□□ -0.85
VPS9D1-201ENST00000389386 ZCCHC13Q8WW36 166 aaKnown RBP9.72□□□□□ -0.85
VPS9D1-201ENST00000389386 C3orf84H3BNL1 204 aa9.72□□□□□ -0.85
VPS9D1-201ENST00000389386 RBM12B-AS1Q9P1G2 102 aa9.72□□□□□ -0.85
VPS9D1-201ENST00000389386 DEFB4AO15263 64 aa9.71□□□□□ -0.86
VPS9D1-201ENST00000389386 PRO0255Q9UI72 69 aa9.7□□□□□ -0.86
VPS9D1-201ENST00000389386 GVQW2A0A096LPI5 108 aaPredicted RBP9.7□□□□□ -0.86
VPS9D1-201ENST00000389386 KRTAP24-1Q3LI83 254 aa9.7□□□□□ -0.86
VPS9D1-201ENST00000389386 LINC00528Q8N1L1 170 aa9.7□□□□□ -0.86
VPS9D1-201ENST00000389386 C6orf48Q9UBA6 75 aa9.68□□□□□ -0.86
VPS9D1-201ENST00000389386 A8MU10 97 aa9.67□□□□□ -0.86
VPS9D1-201ENST00000389386 CYP4F30PQ9H0H9 118 aa9.67□□□□□ -0.86
VPS9D1-201ENST00000389386 VPREB1P12018 145 aa9.66□□□□□ -0.86
VPS9D1-201ENST00000389386 PSCAO43653 123 aa9.65□□□□□ -0.86
VPS9D1-201ENST00000389386 DEFB135Q30KP9 77 aa9.64□□□□□ -0.87
VPS9D1-201ENST00000389386 NOTCH1P46531 2555 aa9.64□□□□□ -0.87
VPS9D1-201ENST00000389386 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.64□□□□□ -0.87
VPS9D1-201ENST00000389386 KTN1-AS1Q86SY8 53 aa9.64□□□□□ -0.87
VPS9D1-201ENST00000389386 ETDCA0A1B0GVM5 59 aa9.63□□□□□ -0.87
VPS9D1-201ENST00000389386 A8MUN3 132 aa9.63□□□□□ -0.87
VPS9D1-201ENST00000389386 M0R378 163 aa9.63□□□□□ -0.87
VPS9D1-201ENST00000389386 SYCNQ0VAF6 134 aa9.62□□□□□ -0.87
VPS9D1-201ENST00000389386 C11orf45Q8TAV5 145 aa9.62□□□□□ -0.87
VPS9D1-201ENST00000389386 IGLV5-48A0A075B6I7 105 aa9.62□□□□□ -0.87
VPS9D1-201ENST00000389386 PRR4Q16378 134 aa9.62□□□□□ -0.87
VPS9D1-201ENST00000389386 X6R8D5 127 aa9.62□□□□□ -0.87
VPS9D1-201ENST00000389386 KPRPQ5T749 579 aaPredicted RBP9.61□□□□□ -0.87
VPS9D1-201ENST00000389386 LINC00588Q9Y4M8 146 aa9.6□□□□□ -0.87
VPS9D1-201ENST00000389386 Q8N377 158 aa9.6□□□□□ -0.87
VPS9D1-201ENST00000389386 ST20-AS1Q8NBB2 130 aa9.59□□□□□ -0.87
VPS9D1-201ENST00000389386 A0A1B0GW54 56 aa9.59□□□□□ -0.87
VPS9D1-201ENST00000389386 A0A1W2PNM2 257 aa9.59□□□□□ -0.87
VPS9D1-201ENST00000389386 Q5VV11 94 aa9.59□□□□□ -0.87
VPS9D1-201ENST00000389386 DEFB105AQ8NG35 78 aa9.59□□□□□ -0.87
VPS9D1-201ENST00000389386 PRR34Q9NV39 138 aa9.58□□□□□ -0.88
VPS9D1-201ENST00000389386 DSCR10P59022 87 aa9.57□□□□□ -0.88
VPS9D1-201ENST00000389386 NBEAL1Q6ZS30 2694 aa9.56□□□□□ -0.88
VPS9D1-201ENST00000389386 OXLD1Q5BKU9 147 aa9.55□□□□□ -0.88
VPS9D1-201ENST00000389386 UBE2BP63146 152 aa9.55□□□□□ -0.88
VPS9D1-201ENST00000389386 HTN3P15516 51 aa9.54□□□□□ -0.88
VPS9D1-201ENST00000389386 APOC4P55056 127 aa9.54□□□□□ -0.88
VPS9D1-201ENST00000389386 MGAM2Q2M2H8 2515 aa9.54□□□□□ -0.88
VPS9D1-201ENST00000389386 K7EQZ3 153 aa9.54□□□□□ -0.88
VPS9D1-201ENST00000389386 PRB2P02812 416 aaPredicted RBP9.54□□□□□ -0.88
VPS9D1-201ENST00000389386 LYRM9A8MSI8 78 aa9.54□□□□□ -0.88
VPS9D1-201ENST00000389386 NDUFB1O75438 58 aa9.53□□□□□ -0.88
VPS9D1-201ENST00000389386 EGFEM1PQ0D2K5 195 aa9.53□□□□□ -0.88
VPS9D1-201ENST00000389386 TENM3Q9P273 2699 aa9.52□□□□□ -0.89
VPS9D1-201ENST00000389386 CAMK2N2Q96S95 79 aa9.52□□□□□ -0.89
VPS9D1-201ENST00000389386 ANK2Q01484 3957 aa9.52□□□□□ -0.89
VPS9D1-201ENST00000389386 CMYA5Q8N3K9 4069 aa9.52□□□□□ -0.89
VPS9D1-201ENST00000389386 LELP1Q5T871 98 aa9.52□□□□□ -0.89
VPS9D1-201ENST00000389386 Q8NBF4 154 aa9.51□□□□□ -0.89
VPS9D1-201ENST00000389386 C16orf90A8MZG2 172 aa9.5□□□□□ -0.89
VPS9D1-201ENST00000389386 C1orf137Q5JT78 98 aa9.5□□□□□ -0.89
VPS9D1-201ENST00000389386 UBE2AP49459 152 aa9.5□□□□□ -0.89
VPS9D1-201ENST00000389386 TNP2Q05952 138 aa9.5□□□□□ -0.89
VPS9D1-201ENST00000389386 B9D2Q9BPU9 175 aa9.5□□□□□ -0.89
VPS9D1-201ENST00000389386 HCG22E2RYF7 251 aa9.49□□□□□ -0.89
VPS9D1-201ENST00000389386 CHKB-CPT1BH3BT56 60 aa9.49□□□□□ -0.89
VPS9D1-201ENST00000389386 Q8N9P0 234 aaPredicted RBP9.49□□□□□ -0.89
VPS9D1-201ENST00000389386 SPRR4Q96PI1 79 aa9.49□□□□□ -0.89
VPS9D1-201ENST00000389386 KCNQ1DNQ9H478 68 aa9.49□□□□□ -0.89
VPS9D1-201ENST00000389386 SPTSSBQ8NFR3 76 aa9.49□□□□□ -0.89
VPS9D1-201ENST00000389386 LIMD2Q9BT23 127 aa9.47□□□□□ -0.89
VPS9D1-201ENST00000389386 NDUFS5O43920 106 aa9.47□□□□□ -0.89
VPS9D1-201ENST00000389386 Q8NAQ8 132 aa9.46□□□□□ -0.89
VPS9D1-201ENST00000389386 MDFIQ99750 246 aa9.46□□□□□ -0.89
VPS9D1-201ENST00000389386 KRTAP10-11P60412 298 aa9.45□□□□□ -0.9
VPS9D1-201ENST00000389386 MP68P56378 58 aa9.44□□□□□ -0.9
VPS9D1-201ENST00000389386 PHF5AQ7RTV0 110 aaKnown RBP9.44□□□□□ -0.9
VPS9D1-201ENST00000389386 DHRS4-AS1Q9P1J3 65 aa9.44□□□□□ -0.9
VPS9D1-201ENST00000389386 LINC00208Q96KT6 92 aa9.43□□□□□ -0.9
VPS9D1-201ENST00000389386 PRR15LQ9BU68 103 aa9.43□□□□□ -0.9
VPS9D1-201ENST00000389386 KRTAP26-1Q6PEX3 210 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms