RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 CPSF4LA6NMK7 179 aaKnown RBP-0.33□□□□□ -2.46
RNU6-40P-201ENST00000384254 MT-ATP8P03928 68 aa-0.33□□□□□ -2.46
RNU6-40P-201ENST00000384254 CEP250Q9BV73 2442 aa-0.33□□□□□ -2.46
RNU6-40P-201ENST00000384254 CFAP54Q96N23 3096 aa-0.33□□□□□ -2.46
RNU6-40P-201ENST00000384254 KNDC1Q76NI1 1749 aa-0.33□□□□□ -2.46
RNU6-40P-201ENST00000384254 MUC3AQ02505 3323 aa-0.33□□□□□ -2.46
RNU6-40P-201ENST00000384254 DNAH12Q6ZR08 3092 aa-0.34□□□□□ -2.46
RNU6-40P-201ENST00000384254 FLGP20930 4061 aaPredicted RBP-0.34□□□□□ -2.46
RNU6-40P-201ENST00000384254 KRTAP19-8Q3LI54 63 aa-0.34□□□□□ -2.46
RNU6-40P-201ENST00000384254 ACBD7Q8N6N7 88 aa-0.34□□□□□ -2.46
RNU6-40P-201ENST00000384254 APLNQ9ULZ1 77 aa-0.34□□□□□ -2.46
RNU6-40P-201ENST00000384254 H7BZZ5 65 aa-0.35□□□□□ -2.47
RNU6-40P-201ENST00000384254 SERP2Q8N6R1 65 aa-0.35□□□□□ -2.47
RNU6-40P-201ENST00000384254 CHD7Q9P2D1 2997 aa-0.35□□□□□ -2.47
RNU6-40P-201ENST00000384254 SPTAN1Q13813 2472 aaKnown RBP-0.36□□□□□ -2.47
RNU6-40P-201ENST00000384254 CRYBG3Q68DQ2 2970 aa-0.36□□□□□ -2.47
RNU6-40P-201ENST00000384254 EDC4Q6P2E9 1401 aaKnown RBP-0.36□□□□□ -2.47
RNU6-40P-201ENST00000384254 COL14A1Q05707 1796 aaKnown RBP-0.36□□□□□ -2.47
RNU6-40P-201ENST00000384254 PAPPA2Q9BXP8 1791 aa-0.36□□□□□ -2.47
RNU6-40P-201ENST00000384254 I3L3M4 83 aa-0.36□□□□□ -2.47
RNU6-40P-201ENST00000384254 SPRR2FQ96RM1 72 aa-0.36□□□□□ -2.47
RNU6-40P-201ENST00000384254 DPY30Q9C005 99 aa-0.36□□□□□ -2.47
RNU6-40P-201ENST00000384254 TRIOO75962 3097 aa-0.36□□□□□ -2.47
RNU6-40P-201ENST00000384254 ANKRD36BQ8N2N9 1353 aa-0.36□□□□□ -2.47
RNU6-40P-201ENST00000384254 FYCO1Q9BQS8 1478 aa-0.36□□□□□ -2.47
RNU6-40P-201ENST00000384254 SZT2Q5T011 3432 aa-0.36□□□□□ -2.47
RNU6-40P-201ENST00000384254 CNTLNQ9NXG0 1405 aa-0.37□□□□□ -2.47
RNU6-40P-201ENST00000384254 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.37□□□□□ -2.47
RNU6-40P-201ENST00000384254 ABCC2Q92887 1545 aa-0.37□□□□□ -2.47
RNU6-40P-201ENST00000384254 ARMS2P0C7Q2 107 aa-0.37□□□□□ -2.47
RNU6-40P-201ENST00000384254 COL5A1-AS1Q5SY13 56 aa-0.37□□□□□ -2.47
RNU6-40P-201ENST00000384254 ANKRD36A6QL64 1941 aa-0.37□□□□□ -2.47
RNU6-40P-201ENST00000384254 FRYQ5TBA9 3013 aa-0.37□□□□□ -2.47
RNU6-40P-201ENST00000384254 ACACAQ13085 2346 aa-0.38□□□□□ -2.47
RNU6-40P-201ENST00000384254 ALMS1Q8TCU4 4167 aa-0.38□□□□□ -2.47
RNU6-40P-201ENST00000384254 RAPGEF2Q9Y4G8 1499 aa-0.38□□□□□ -2.47
RNU6-40P-201ENST00000384254 VPS13BQ7Z7G8 4022 aa-0.38□□□□□ -2.47
RNU6-40P-201ENST00000384254 CENPEQ02224 2701 aa-0.38□□□□□ -2.47
RNU6-40P-201ENST00000384254 DNAJC13O75165 2243 aa-0.38□□□□□ -2.47
RNU6-40P-201ENST00000384254 FAT2Q9NYQ8 4349 aa-0.39□□□□□ -2.47
RNU6-40P-201ENST00000384254 MARF1Q9Y4F3 1742 aaKnown RBP-0.39□□□□□ -2.47
RNU6-40P-201ENST00000384254 SACSQ9NZJ4 4579 aa-0.4□□□□□ -2.47
RNU6-40P-201ENST00000384254 SHPRHQ149N8 1683 aa-0.4□□□□□ -2.47
RNU6-40P-201ENST00000384254 TEX14Q8IWB6 1497 aa-0.4□□□□□ -2.47
RNU6-40P-201ENST00000384254 RANBP2P49792 3224 aaKnown RBP-0.4□□□□□ -2.47
RNU6-40P-201ENST00000384254 TARBP1Q13395 1621 aaKnown RBP-0.4□□□□□ -2.47
RNU6-40P-201ENST00000384254 UQCRHLA0A096LP55 91 aa-0.41□□□□□ -2.48
RNU6-40P-201ENST00000384254 M0R2T5 61 aa-0.41□□□□□ -2.48
RNU6-40P-201ENST00000384254 RELNP78509 3460 aa-0.41□□□□□ -2.48
RNU6-40P-201ENST00000384254 ATMQ13315 3056 aa-0.41□□□□□ -2.48
RNU6-40P-201ENST00000384254 FAUP35544 74 aaKnown RBP-0.42□□□□□ -2.48
RNU6-40P-201ENST00000384254 HMGN3Q15651 99 aa-0.42□□□□□ -2.48
RNU6-40P-201ENST00000384254 ZNF720Q7Z2F6 126 aa-0.42□□□□□ -2.48
RNU6-40P-201ENST00000384254 LRRC37AA6NMS7 1700 aa-0.42□□□□□ -2.48
RNU6-40P-201ENST00000384254 PKD1P98161 4303 aa-0.42□□□□□ -2.48
RNU6-40P-201ENST00000384254 DMXL1Q9Y485 3027 aa-0.43□□□□□ -2.48
RNU6-40P-201ENST00000384254 CDH23Q9H251 3354 aa-0.43□□□□□ -2.48
RNU6-40P-201ENST00000384254 DNAH3Q8TD57 4116 aa-0.43□□□□□ -2.48
RNU6-40P-201ENST00000384254 ALKAL2Q6UX46 152 aa-0.43□□□□□ -2.48
RNU6-40P-201ENST00000384254 WDFY3Q8IZQ1 3526 aa-0.43□□□□□ -2.48
RNU6-40P-201ENST00000384254 PLECQ15149 4684 aaKnown RBP-0.43□□□□□ -2.48
RNU6-40P-201ENST00000384254 CENPFP49454 3210 aa-0.43□□□□□ -2.48
RNU6-40P-201ENST00000384254 MON2Q7Z3U7 1717 aa-0.44□□□□□ -2.48
RNU6-40P-201ENST00000384254 M0R143 59 aa-0.44□□□□□ -2.48
RNU6-40P-201ENST00000384254 ETDBQ3ZM63 59 aa-0.44□□□□□ -2.48
RNU6-40P-201ENST00000384254 NKTRP30414 1462 aaKnown RBP-0.44□□□□□ -2.48
RNU6-40P-201ENST00000384254 DNAH5Q8TE73 4624 aa-0.44□□□□□ -2.48
RNU6-40P-201ENST00000384254 VPS13CQ709C8 3753 aa-0.45□□□□□ -2.48
RNU6-40P-201ENST00000384254 PKHD1P08F94 4074 aa-0.45□□□□□ -2.48
RNU6-40P-201ENST00000384254 IQSEC2Q5JU85 1478 aa-0.45□□□□□ -2.48
RNU6-40P-201ENST00000384254 PDE4DIPQ5VU43 2346 aa-0.46□□□□□ -2.48
RNU6-40P-201ENST00000384254 FRYLO94915 3013 aa-0.46□□□□□ -2.48
RNU6-40P-201ENST00000384254 PKHD1L1Q86WI1 4243 aa-0.46□□□□□ -2.48
RNU6-40P-201ENST00000384254 APOBP04114 4563 aaKnown RBP-0.46□□□□□ -2.48
RNU6-40P-201ENST00000384254 BRCA2P51587 3418 aa-0.46□□□□□ -2.48
RNU6-40P-201ENST00000384254 ZZEF1O43149 2961 aa-0.46□□□□□ -2.48
RNU6-40P-201ENST00000384254 NCMAPQ5T1S8 102 aa-0.46□□□□□ -2.48
RNU6-40P-201ENST00000384254 C5P01031 1676 aa-0.46□□□□□ -2.48
RNU6-40P-201ENST00000384254 PRUNE2Q8WUY3 3088 aa-0.47□□□□□ -2.48
RNU6-40P-201ENST00000384254 D6R8Y8 96 aa-0.47□□□□□ -2.48
RNU6-40P-201ENST00000384254 LEPROTL1O95214 131 aa-0.47□□□□□ -2.48
RNU6-40P-201ENST00000384254 MUSTN1Q8IVN3 82 aa-0.47□□□□□ -2.48
RNU6-40P-201ENST00000384254 HTTP42858 3142 aa-0.47□□□□□ -2.49
RNU6-40P-201ENST00000384254 USP34Q70CQ2 3546 aa-0.47□□□□□ -2.49
RNU6-40P-201ENST00000384254 KIAA1551Q9HCM1 1747 aa-0.48□□□□□ -2.49
RNU6-40P-201ENST00000384254 ASPMQ8IZT6 3477 aa-0.48□□□□□ -2.49
RNU6-40P-201ENST00000384254 MUC17Q685J3 4493 aa-0.48□□□□□ -2.49
RNU6-40P-201ENST00000384254 CLTCQ00610 1675 aaKnown RBP-0.49□□□□□ -2.49
RNU6-40P-201ENST00000384254 DNAH6Q9C0G6 4158 aa-0.49□□□□□ -2.49
RNU6-40P-201ENST00000384254 TRBV7-7A0A0K0K1E9 115 aa-0.49□□□□□ -2.49
RNU6-40P-201ENST00000384254 SPTY2D1-AS1A0A0U1RR47 76 aa-0.49□□□□□ -2.49
RNU6-40P-201ENST00000384254 H1FX-AS1Q4G0G2 97 aa-0.49□□□□□ -2.49
RNU6-40P-201ENST00000384254 NRXN1Q9ULB1 1477 aa-0.49□□□□□ -2.49
RNU6-40P-201ENST00000384254 UTRNP46939 3433 aa-0.5□□□□□ -2.49
RNU6-40P-201ENST00000384254 KIF20BQ96Q89 1820 aa-0.5□□□□□ -2.49
RNU6-40P-201ENST00000384254 VPS13AQ96RL7 3174 aa-0.51□□□□□ -2.49
RNU6-40P-201ENST00000384254 CMYA5Q8N3K9 4069 aa-0.51□□□□□ -2.49
RNU6-40P-201ENST00000384254 CCL22O00626 93 aa-0.51□□□□□ -2.49
RNU6-40P-201ENST00000384254 SLIT1O75093 1534 aa-0.51□□□□□ -2.49
RNU6-40P-201ENST00000384254 SMR3BP02814 79 aaPredicted RBP-0.51□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms