RNA–Protein interactions for RNA: ENST00000373163.5

TRAPPC3-203, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-203ENST00000373163 LINC00614P0C842 121 aa8.35□□□□□ -1.07
TRAPPC3-203ENST00000373163 PMVKQ15126 192 aa8.34□□□□□ -1.07
TRAPPC3-203ENST00000373163 MIEN1Q9BRT3 115 aa8.34□□□□□ -1.07
TRAPPC3-203ENST00000373163 CBY1Q9Y3M2 126 aa8.34□□□□□ -1.07
TRAPPC3-203ENST00000373163 IGLV6-57P01721 117 aa8.33□□□□□ -1.08
TRAPPC3-203ENST00000373163 NCR3O14931 201 aa8.32□□□□□ -1.08
TRAPPC3-203ENST00000373163 LINC00158P58513 81 aa8.32□□□□□ -1.08
TRAPPC3-203ENST00000373163 SNHG12Q9BXW3 62 aa8.32□□□□□ -1.08
TRAPPC3-203ENST00000373163 B5MCH6 92 aa8.31□□□□□ -1.08
TRAPPC3-203ENST00000373163 SFTA2Q6UW10 78 aa8.31□□□□□ -1.08
TRAPPC3-203ENST00000373163 LIMD2Q9BT23 127 aa8.31□□□□□ -1.08
TRAPPC3-203ENST00000373163 IGLC3P0DOY3 106 aa8.3□□□□□ -1.08
TRAPPC3-203ENST00000373163 KRTAP19-1Q8IUB9 90 aa8.3□□□□□ -1.08
TRAPPC3-203ENST00000373163 VAMP8Q9BV40 100 aa8.3□□□□□ -1.08
TRAPPC3-203ENST00000373163 TRBV10-3A0A0K0K1G6 114 aa8.29□□□□□ -1.08
TRAPPC3-203ENST00000373163 C20orf202A1L168 122 aa8.29□□□□□ -1.08
TRAPPC3-203ENST00000373163 LINC01549A6NIU2 74 aa8.29□□□□□ -1.08
TRAPPC3-203ENST00000373163 DLEU1O43261 78 aa8.29□□□□□ -1.08
TRAPPC3-203ENST00000373163 ZNF22P17026 224 aaPredicted RBP8.29□□□□□ -1.08
TRAPPC3-203ENST00000373163 COL5A1-AS1Q5SY13 56 aa8.29□□□□□ -1.08
TRAPPC3-203ENST00000373163 BOD1L2Q8IYS8 172 aa8.29□□□□□ -1.08
TRAPPC3-203ENST00000373163 A0A0U1RRA0 63 aa8.28□□□□□ -1.08
TRAPPC3-203ENST00000373163 RPL37P61927 97 aaKnown RBP8.28□□□□□ -1.08
TRAPPC3-203ENST00000373163 BAGE3Q86Y29 109 aa8.28□□□□□ -1.08
TRAPPC3-203ENST00000373163 Q9BRP9 147 aa8.28□□□□□ -1.08
TRAPPC3-203ENST00000373163 KRTAP9-8Q9BYQ0 159 aa8.27□□□□□ -1.09
TRAPPC3-203ENST00000373163 UQCR10Q9UDW1 63 aa8.27□□□□□ -1.09
TRAPPC3-203ENST00000373163 PMCHL1Q16048 86 aa8.26□□□□□ -1.09
TRAPPC3-203ENST00000373163 HRCT1Q6UXD1 115 aa8.26□□□□□ -1.09
TRAPPC3-203ENST00000373163 Q6Q795 121 aa8.25□□□□□ -1.09
TRAPPC3-203ENST00000373163 SERF1AO75920 110 aa8.24□□□□□ -1.09
TRAPPC3-203ENST00000373163 Q6ZRX8 168 aa8.24□□□□□ -1.09
TRAPPC3-203ENST00000373163 MACF1Q9UPN3 7388 aaKnown RBP8.23□□□□□ -1.09
TRAPPC3-203ENST00000373163 KIAA1644Q3SXP7 199 aa8.23□□□□□ -1.09
TRAPPC3-203ENST00000373163 LINC01546A6NGU7 62 aa8.22□□□□□ -1.09
TRAPPC3-203ENST00000373163 SYNE2Q8WXH0 6885 aaKnown RBP8.22□□□□□ -1.09
TRAPPC3-203ENST00000373163 SMIM13P0DJ93 91 aa8.21□□□□□ -1.1
TRAPPC3-203ENST00000373163 TMEM170BQ5T4T1 132 aa8.2□□□□□ -1.1
TRAPPC3-203ENST00000373163 LINC00310P59036 64 aa8.19□□□□□ -1.1
TRAPPC3-203ENST00000373163 SPATA45Q537H7 98 aa8.19□□□□□ -1.1
TRAPPC3-203ENST00000373163 PET117Q6UWS5 81 aa8.19□□□□□ -1.1
TRAPPC3-203ENST00000373163 MIR7-3HGQ8N6C7 128 aa8.19□□□□□ -1.1
TRAPPC3-203ENST00000373163 PAM16Q9Y3D7 125 aa8.19□□□□□ -1.1
TRAPPC3-203ENST00000373163 C11orf86A6NJI1 115 aa8.18□□□□□ -1.1
TRAPPC3-203ENST00000373163 KRTDAPP60985 99 aa8.18□□□□□ -1.1
TRAPPC3-203ENST00000373163 ST20-AS1Q8NBB2 130 aa8.18□□□□□ -1.1
TRAPPC3-203ENST00000373163 MEIG1Q5JSS6 88 aa8.17□□□□□ -1.1
TRAPPC3-203ENST00000373163 LCE2BO14633 110 aa8.15□□□□□ -1.1
TRAPPC3-203ENST00000373163 HSBP1O75506 76 aa8.15□□□□□ -1.1
TRAPPC3-203ENST00000373163 FA2HQ7L5A8 372 aa8.15□□□□□ -1.1
TRAPPC3-203ENST00000373163 CHCHD1Q96BP2 118 aaKnown RBP8.14□□□□□ -1.11
TRAPPC3-203ENST00000373163 C3orf79P0CE67 100 aa8.13□□□□□ -1.11
TRAPPC3-203ENST00000373163 BATFQ16520 125 aa8.13□□□□□ -1.11
TRAPPC3-203ENST00000373163 TRBV10-2A0A0K0K1G8 114 aa8.12□□□□□ -1.11
TRAPPC3-203ENST00000373163 UBE2V1Q13404 147 aa8.12□□□□□ -1.11
TRAPPC3-203ENST00000373163 C18orf32Q8TCD1 76 aa8.12□□□□□ -1.11
TRAPPC3-203ENST00000373163 PMCHL2Q9BQD1 86 aa8.12□□□□□ -1.11
TRAPPC3-203ENST00000373163 HSBP1L1C9JCN9 74 aa8.11□□□□□ -1.11
TRAPPC3-203ENST00000373163 H7C2G1 150 aa8.11□□□□□ -1.11
TRAPPC3-203ENST00000373163 CD164Q04900 197 aa8.11□□□□□ -1.11
TRAPPC3-203ENST00000373163 C1orf195Q5TG92 126 aa8.11□□□□□ -1.11
TRAPPC3-203ENST00000373163 SLC25A34Q6PIV7 304 aa8.11□□□□□ -1.11
TRAPPC3-203ENST00000373163 HERV-K104P63124 156 aa8.1□□□□□ -1.11
TRAPPC3-203ENST00000373163 A0A096LNJ9 63 aa8.09□□□□□ -1.11
TRAPPC3-203ENST00000373163 TMEM223A0PJW6 202 aa8.09□□□□□ -1.11
TRAPPC3-203ENST00000373163 SPRR1BP22528 89 aa8.09□□□□□ -1.11
TRAPPC3-203ENST00000373163 LAMTOR3Q9UHA4 124 aa8.09□□□□□ -1.11
TRAPPC3-203ENST00000373163 CHTOPQ9Y3Y2 248 aaKnown RBP8.09□□□□□ -1.11
TRAPPC3-203ENST00000373163 TRAV23DV6A0A075B6W5 121 aa8.08□□□□□ -1.12
TRAPPC3-203ENST00000373163 MT2AP02795 61 aa8.08□□□□□ -1.12
TRAPPC3-203ENST00000373163 PCP4P48539 62 aa8.08□□□□□ -1.12
TRAPPC3-203ENST00000373163 ANKRD39Q53RE8 183 aa8.08□□□□□ -1.12
TRAPPC3-203ENST00000373163 S100A7L2Q5SY68 101 aa8.08□□□□□ -1.12
TRAPPC3-203ENST00000373163 Q5XG85 94 aa8.08□□□□□ -1.12
TRAPPC3-203ENST00000373163 MAP1LC3CQ9BXW4 147 aa8.08□□□□□ -1.12
TRAPPC3-203ENST00000373163 SPANXB1Q9NS25 103 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC3-203ENST00000373163 HSPB8Q9UJY1 196 aa8.08□□□□□ -1.12
TRAPPC3-203ENST00000373163 ZNF73O43830 326 aaPredicted RBP8.06□□□□□ -1.12
TRAPPC3-203ENST00000373163 LOC107984156A0A0G2JMH3 177 aa8.05□□□□□ -1.12
TRAPPC3-203ENST00000373163 ARL17AQ8IVW1 177 aa8.05□□□□□ -1.12
TRAPPC3-203ENST00000373163 LINC00846Q9NV44 126 aa8.05□□□□□ -1.12
TRAPPC3-203ENST00000373163 SYS1-DBNDD2H3BUS1 97 aa8.04□□□□□ -1.12
TRAPPC3-203ENST00000373163 LEPROTL1O95214 131 aa8.04□□□□□ -1.12
TRAPPC3-203ENST00000373163 HBDP02042 147 aa8.04□□□□□ -1.12
TRAPPC3-203ENST00000373163 MT1FP04733 61 aa8.03□□□□□ -1.12
TRAPPC3-203ENST00000373163 HINT1P49773 126 aaPredicted RBP8.03□□□□□ -1.12
TRAPPC3-203ENST00000373163 ATP11AUNQ6ZP68 121 aa8.03□□□□□ -1.12
TRAPPC3-203ENST00000373163 SMIM29Q86T20 159 aa8.03□□□□□ -1.12
TRAPPC3-203ENST00000373163 KRTAP9-3Q9BYQ3 159 aa8.03□□□□□ -1.12
TRAPPC3-203ENST00000373163 VAMP3Q15836 100 aa8.02□□□□□ -1.13
TRAPPC3-203ENST00000373163 KRTAP6-3Q3LI67 103 aa8.02□□□□□ -1.13
TRAPPC3-203ENST00000373163 MYMXA0A1B0GTQ4 84 aa8.01□□□□□ -1.13
TRAPPC3-203ENST00000373163 Q1RN00 199 aa8.01□□□□□ -1.13
TRAPPC3-203ENST00000373163 K7ERU9 68 aa8□□□□□ -1.13
TRAPPC3-203ENST00000373163 BVES-AS1Q5T3Y7 98 aa8□□□□□ -1.13
TRAPPC3-203ENST00000373163 NDUFC2O95298 119 aa7.99□□□□□ -1.13
TRAPPC3-203ENST00000373163 LINC01545Q5VT33 79 aa7.99□□□□□ -1.13
TRAPPC3-203ENST00000373163 GTF2H5Q6ZYL4 71 aa7.99□□□□□ -1.13
TRAPPC3-203ENST00000373163 URB1-AS1Q96HZ7 61 aa7.99□□□□□ -1.13
TRAPPC3-203ENST00000373163 A6NDN8 102 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms