RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 FN1P02751 2386 aaKnown RBP11.84□□□□□ -0.51
SNX27-202ENST00000368841 ZNF575Q86XF7 245 aa11.84□□□□□ -0.51
SNX27-202ENST00000368841 IGLV5-48A0A075B6I7 105 aa11.82□□□□□ -0.52
SNX27-202ENST00000368841 ERC2-IT1O76042 136 aa11.82□□□□□ -0.52
SNX27-202ENST00000368841 PSORS1C2Q9UIG4 136 aa11.81□□□□□ -0.52
SNX27-202ENST00000368841 JMJD1CQ15652 2540 aa11.81□□□□□ -0.52
SNX27-202ENST00000368841 RPS28P62857 69 aaKnown RBP11.8□□□□□ -0.52
SNX27-202ENST00000368841 IGLV7-43P04211 117 aa11.79□□□□□ -0.52
SNX27-202ENST00000368841 RBM12B-AS1Q9P1G2 102 aa11.78□□□□□ -0.52
SNX27-202ENST00000368841 GIG44P09565 113 aaPredicted RBP11.77□□□□□ -0.53
SNX27-202ENST00000368841 C19orf73Q9NVV2 129 aa11.77□□□□□ -0.53
SNX27-202ENST00000368841 ABCA12Q86UK0 2595 aa11.74□□□□□ -0.53
SNX27-202ENST00000368841 MYO9AB2RTY4 2548 aa11.73□□□□□ -0.53
SNX27-202ENST00000368841 TLN1Q9Y490 2541 aaKnown RBP11.72□□□□□ -0.53
SNX27-202ENST00000368841 PRR34Q9NV39 138 aa11.7□□□□□ -0.54
SNX27-202ENST00000368841 ZFYVE26Q68DK2 2539 aa11.67□□□□□ -0.54
SNX27-202ENST00000368841 SPRR4Q96PI1 79 aa11.66□□□□□ -0.54
SNX27-202ENST00000368841 CYP4F30PQ9H0H9 118 aa11.66□□□□□ -0.54
SNX27-202ENST00000368841 C9orf163Q8N9P6 203 aa11.65□□□□□ -0.55
SNX27-202ENST00000368841 M0R2T5 61 aa11.64□□□□□ -0.55
SNX27-202ENST00000368841 FAM104AQ969W3 186 aa11.64□□□□□ -0.55
SNX27-202ENST00000368841 CDC42SE1Q9NRR8 79 aa11.63□□□□□ -0.55
SNX27-202ENST00000368841 LINC00336Q6ZUF6 198 aa11.61□□□□□ -0.55
SNX27-202ENST00000368841 TLN2Q9Y4G6 2542 aa11.6□□□□□ -0.55
SNX27-202ENST00000368841 A0A1W2PNM2 257 aa11.6□□□□□ -0.55
SNX27-202ENST00000368841 TNP2Q05952 138 aa11.6□□□□□ -0.55
SNX27-202ENST00000368841 DNAH12Q6ZR08 3092 aa11.6□□□□□ -0.55
SNX27-202ENST00000368841 ANKRD17O75179 2603 aaKnown RBP11.6□□□□□ -0.55
SNX27-202ENST00000368841 LINC00612Q8N6U2 182 aa11.59□□□□□ -0.55
SNX27-202ENST00000368841 PRR26Q8N8Z3 221 aa11.59□□□□□ -0.55
SNX27-202ENST00000368841 A0A096LNT2 108 aa11.58□□□□□ -0.56
SNX27-202ENST00000368841 H7BZZ5 65 aa11.58□□□□□ -0.56
SNX27-202ENST00000368841 TLX1NBP0CAT3 122 aa11.57□□□□□ -0.56
SNX27-202ENST00000368841 Q6ZSA8 131 aa11.57□□□□□ -0.56
SNX27-202ENST00000368841 PLA2G2DQ9UNK4 145 aa11.55□□□□□ -0.56
SNX27-202ENST00000368841 KLK9Q2XQG4 91 aa11.53□□□□□ -0.56
SNX27-202ENST00000368841 PCNTO95613 3336 aa11.52□□□□□ -0.57
SNX27-202ENST00000368841 KLKP1Q107X0 134 aa11.52□□□□□ -0.57
SNX27-202ENST00000368841 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.5□□□□□ -0.57
SNX27-202ENST00000368841 SETD2Q9BYW2 2564 aaPredicted RBP11.49□□□□□ -0.57
SNX27-202ENST00000368841 KTN1-AS1Q86SY8 53 aa11.48□□□□□ -0.57
SNX27-202ENST00000368841 CAMK2N1Q7Z7J9 78 aa11.48□□□□□ -0.57
SNX27-202ENST00000368841 IGLV7-46A0A075B6I9 117 aa11.47□□□□□ -0.57
SNX27-202ENST00000368841 KRTAP1-3Q8IUG1 177 aa11.47□□□□□ -0.57
SNX27-202ENST00000368841 CD164Q04900 197 aa11.47□□□□□ -0.57
SNX27-202ENST00000368841 CNBPP62633 177 aaKnown RBP11.46□□□□□ -0.57
SNX27-202ENST00000368841 ZNF462Q96JM2 2506 aa11.44□□□□□ -0.58
SNX27-202ENST00000368841 USP9XQ93008 2570 aaPredicted RBP11.42□□□□□ -0.58
SNX27-202ENST00000368841 C5orf42Q9H799 3197 aa11.41□□□□□ -0.58
SNX27-202ENST00000368841 ANKRD11Q6UB99 2663 aaPredicted RBP11.41□□□□□ -0.58
SNX27-202ENST00000368841 LCA10Q71F78 164 aa11.4□□□□□ -0.58
SNX27-202ENST00000368841 WIPF1O43516 503 aa11.38□□□□□ -0.59
SNX27-202ENST00000368841 LUZP6Q538Z0 58 aa11.38□□□□□ -0.59
SNX27-202ENST00000368841 CR1P17927 2039 aa11.38□□□□□ -0.59
SNX27-202ENST00000368841 KRTAP1-1Q07627 177 aa11.37□□□□□ -0.59
SNX27-202ENST00000368841 PIEZO1Q92508 2521 aa11.37□□□□□ -0.59
SNX27-202ENST00000368841 POLQO75417 2590 aa11.36□□□□□ -0.59
SNX27-202ENST00000368841 HRES1P13985 223 aa11.34□□□□□ -0.59
SNX27-202ENST00000368841 PKD1L2Q7Z442 2459 aa11.32□□□□□ -0.6
SNX27-202ENST00000368841 S4R3F8 94 aa11.31□□□□□ -0.6
SNX27-202ENST00000368841 A0A1B0GU33 70 aa11.3□□□□□ -0.6
SNX27-202ENST00000368841 FAM229BQ4G0N7 80 aa11.3□□□□□ -0.6
SNX27-202ENST00000368841 SPANXA2-OT1Q8N9U9 137 aa11.3□□□□□ -0.6
SNX27-202ENST00000368841 ACANP16112 2415 aa11.29□□□□□ -0.6
SNX27-202ENST00000368841 Q1T7F1 81 aa11.28□□□□□ -0.6
SNX27-202ENST00000368841 LINC00483Q53H64 154 aa11.27□□□□□ -0.6
SNX27-202ENST00000368841 SPTBN4Q9H254 2564 aa11.27□□□□□ -0.61
SNX27-202ENST00000368841 Q8N9P0 234 aaPredicted RBP11.26□□□□□ -0.61
SNX27-202ENST00000368841 OCR1Q9BZK8 76 aa11.24□□□□□ -0.61
SNX27-202ENST00000368841 CHD8Q9HCK8 2581 aa11.23□□□□□ -0.61
SNX27-202ENST00000368841 PRAC1Q96KF2 57 aa11.22□□□□□ -0.61
SNX27-202ENST00000368841 MTORP42345 2549 aa11.21□□□□□ -0.61
SNX27-202ENST00000368841 F8P00451 2351 aa11.21□□□□□ -0.61
SNX27-202ENST00000368841 CEP295Q9C0D2 2601 aa11.2□□□□□ -0.62
SNX27-202ENST00000368841 Q8NDZ9 215 aa11.18□□□□□ -0.62
SNX27-202ENST00000368841 XIRP2A4UGR9 3374 aa11.18□□□□□ -0.62
SNX27-202ENST00000368841 USP9YO00507 2555 aaPredicted RBP11.17□□□□□ -0.62
SNX27-202ENST00000368841 ZCCHC13Q8WW36 166 aaKnown RBP11.17□□□□□ -0.62
SNX27-202ENST00000368841 BPTFQ12830 3046 aa11.12□□□□□ -0.63
SNX27-202ENST00000368841 MMP24-AS1A0A0U1RRL7 71 aa11.12□□□□□ -0.63
SNX27-202ENST00000368841 FASNP49327 2511 aaKnown RBP11.12□□□□□ -0.63
SNX27-202ENST00000368841 Q5VSD8 79 aa11.09□□□□□ -0.63
SNX27-202ENST00000368841 CSAG1Q6PB30 78 aa11.08□□□□□ -0.63
SNX27-202ENST00000368841 Q5W150 140 aa11.08□□□□□ -0.64
SNX27-202ENST00000368841 CYSTM1Q9H1C7 97 aa11.06□□□□□ -0.64
SNX27-202ENST00000368841 PLAC8Q9NZF1 115 aa11.05□□□□□ -0.64
SNX27-202ENST00000368841 R4GN34 69 aa11.05□□□□□ -0.64
SNX27-202ENST00000368841 Q75L30 129 aa11.04□□□□□ -0.64
SNX27-202ENST00000368841 SPINK7P58062 85 aa11.03□□□□□ -0.64
SNX27-202ENST00000368841 CEP350Q5VT06 3117 aa11.01□□□□□ -0.65
SNX27-202ENST00000368841 DMAC1Q96GE9 116 aa11□□□□□ -0.65
SNX27-202ENST00000368841 KRTAP1-5Q9BYS1 174 aa10.98□□□□□ -0.65
SNX27-202ENST00000368841 KRTAP10-2P60368 255 aa10.98□□□□□ -0.65
SNX27-202ENST00000368841 KRTAP10-1P60331 282 aa10.95□□□□□ -0.66
SNX27-202ENST00000368841 MKI67P46013 3256 aaKnown RBP10.92□□□□□ -0.66
SNX27-202ENST00000368841 M0QZ58 72 aa10.92□□□□□ -0.66
SNX27-202ENST00000368841 LINC01558Q9Y6Z2 57 aa10.91□□□□□ -0.66
SNX27-202ENST00000368841 Q5XG85 94 aa10.91□□□□□ -0.66
SNX27-202ENST00000368841 Q5VV11 94 aa10.89□□□□□ -0.67
SNX27-202ENST00000368841 SPATA8Q6RVD6 105 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms