RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 IGLV5-37A0A075B6J1 123 aa9.26□□□□□ -0.93
SMPDL3A-201ENST00000368440 MRPL55Q7Z7F7 128 aaKnown RBP9.26□□□□□ -0.93
SMPDL3A-201ENST00000368440 FAT3Q8TDW7 4589 aa9.26□□□□□ -0.93
SMPDL3A-201ENST00000368440 RPL13AP40429 203 aaKnown RBP9.25□□□□□ -0.93
SMPDL3A-201ENST00000368440 VPREB1P12018 145 aa9.25□□□□□ -0.93
SMPDL3A-201ENST00000368440 LINC00167Q96N53 147 aa9.25□□□□□ -0.93
SMPDL3A-201ENST00000368440 LOC107984156A0A0G2JMH3 177 aa9.24□□□□□ -0.93
SMPDL3A-201ENST00000368440 A0A1W2PPM0 123 aa9.24□□□□□ -0.93
SMPDL3A-201ENST00000368440 GAGE10A6NGK3 116 aa9.24□□□□□ -0.93
SMPDL3A-201ENST00000368440 ARL17AQ8IVW1 177 aa9.24□□□□□ -0.93
SMPDL3A-201ENST00000368440 NKAPP1Q8N9T2 125 aa9.23□□□□□ -0.93
SMPDL3A-201ENST00000368440 IGKV2-28A0A075B6P5 120 aa9.23□□□□□ -0.93
SMPDL3A-201ENST00000368440 RPL37AP8A6NKH3 93 aa9.23□□□□□ -0.93
SMPDL3A-201ENST00000368440 KRTAP29-1A8MX34 341 aaPredicted RBP9.23□□□□□ -0.93
SMPDL3A-201ENST00000368440 IGKV2D-28P01615 120 aa9.23□□□□□ -0.93
SMPDL3A-201ENST00000368440 PSMB2P49721 201 aa9.23□□□□□ -0.93
SMPDL3A-201ENST00000368440 FABP2P12104 132 aa9.22□□□□□ -0.93
SMPDL3A-201ENST00000368440 NCR3O14931 201 aa9.21□□□□□ -0.93
SMPDL3A-201ENST00000368440 IGLV7-43P04211 117 aa9.21□□□□□ -0.93
SMPDL3A-201ENST00000368440 SPINK6Q6UWN8 80 aa9.21□□□□□ -0.93
SMPDL3A-201ENST00000368440 LINC00337Q8N6G1 96 aa9.21□□□□□ -0.93
SMPDL3A-201ENST00000368440 OR13C6PQ8NH95 151 aa9.21□□□□□ -0.93
SMPDL3A-201ENST00000368440 PPDPFQ9H3Y8 114 aa9.2□□□□□ -0.94
SMPDL3A-201ENST00000368440 SPCS1Q9Y6A9 102 aa9.2□□□□□ -0.94
SMPDL3A-201ENST00000368440 SCGB1C2P0DMR2 95 aa9.19□□□□□ -0.94
SMPDL3A-201ENST00000368440 OXTP01178 125 aa9.19□□□□□ -0.94
SMPDL3A-201ENST00000368440 TRAV13-2A0A0B4J235 113 aa9.18□□□□□ -0.94
SMPDL3A-201ENST00000368440 J3QL48 77 aa9.18□□□□□ -0.94
SMPDL3A-201ENST00000368440 TRIAP1O43715 76 aa9.17□□□□□ -0.94
SMPDL3A-201ENST00000368440 IGLV1-50A0A075B6I6 118 aa9.16□□□□□ -0.94
SMPDL3A-201ENST00000368440 DMBT1Q9UGM3 2413 aaPredicted RBP9.16□□□□□ -0.94
SMPDL3A-201ENST00000368440 K7EP34 96 aa9.15□□□□□ -0.94
SMPDL3A-201ENST00000368440 NDUFC2O95298 119 aa9.15□□□□□ -0.94
SMPDL3A-201ENST00000368440 BCE1O60756 84 aa9.15□□□□□ -0.95
SMPDL3A-201ENST00000368440 UBE2V1Q13404 147 aa9.15□□□□□ -0.95
SMPDL3A-201ENST00000368440 GTF2H5Q6ZYL4 71 aa9.15□□□□□ -0.95
SMPDL3A-201ENST00000368440 MT1HL1P0DM35 61 aa9.14□□□□□ -0.95
SMPDL3A-201ENST00000368440 S100A7L2Q5SY68 101 aa9.14□□□□□ -0.95
SMPDL3A-201ENST00000368440 M0R378 163 aa9.13□□□□□ -0.95
SMPDL3A-201ENST00000368440 HERC1Q15751 4861 aa9.13□□□□□ -0.95
SMPDL3A-201ENST00000368440 H0Y9J4 135 aa9.13□□□□□ -0.95
SMPDL3A-201ENST00000368440 H3BMG7 143 aa9.13□□□□□ -0.95
SMPDL3A-201ENST00000368440 REG3GQ6UW15 175 aa9.13□□□□□ -0.95
SMPDL3A-201ENST00000368440 SMIM11BQ8TCY0 68 aa9.13□□□□□ -0.95
SMPDL3A-201ENST00000368440 DIRC1Q969H9 104 aa9.13□□□□□ -0.95
SMPDL3A-201ENST00000368440 ZNF861PO60384 105 aa9.12□□□□□ -0.95
SMPDL3A-201ENST00000368440 TCL1BO95988 128 aa9.12□□□□□ -0.95
SMPDL3A-201ENST00000368440 LYRM7Q5U5X0 104 aa9.12□□□□□ -0.95
SMPDL3A-201ENST00000368440 CLEC2BQ92478 149 aa9.12□□□□□ -0.95
SMPDL3A-201ENST00000368440 TMEM126AQ9H061 195 aa9.12□□□□□ -0.95
SMPDL3A-201ENST00000368440 MTURNQ8N3F0 131 aa9.11□□□□□ -0.95
SMPDL3A-201ENST00000368440 LINC01600Q96MT4 127 aa9.11□□□□□ -0.95
SMPDL3A-201ENST00000368440 COX6CP09669 75 aa9.11□□□□□ -0.95
SMPDL3A-201ENST00000368440 KRTAP13-1Q8IUC0 172 aa9.1□□□□□ -0.95
SMPDL3A-201ENST00000368440 TRBV10-3A0A0K0K1G6 114 aa9.08□□□□□ -0.96
SMPDL3A-201ENST00000368440 RPL28P46779 137 aaKnown RBP9.08□□□□□ -0.96
SMPDL3A-201ENST00000368440 PRLHP81277 87 aa9.08□□□□□ -0.96
SMPDL3A-201ENST00000368440 KRTAP1-4P0C5Y4 121 aa9.07□□□□□ -0.96
SMPDL3A-201ENST00000368440 UBE2AP49459 152 aa9.07□□□□□ -0.96
SMPDL3A-201ENST00000368440 FAM19A1Q7Z5A9 133 aa9.07□□□□□ -0.96
SMPDL3A-201ENST00000368440 TRBV10-2A0A0K0K1G8 114 aa9.06□□□□□ -0.96
SMPDL3A-201ENST00000368440 TNXBP22105 4242 aa9.06□□□□□ -0.96
SMPDL3A-201ENST00000368440 TRBV20-1A0A075B6N2 111 aa9.06□□□□□ -0.96
SMPDL3A-201ENST00000368440 PRYO14603 147 aa9.06□□□□□ -0.96
SMPDL3A-201ENST00000368440 IGLV6-57P01721 117 aa9.05□□□□□ -0.96
SMPDL3A-201ENST00000368440 ATXN8Q156A1 80 aa9.05□□□□□ -0.96
SMPDL3A-201ENST00000368440 KCNQ1DNQ9H478 68 aa9.05□□□□□ -0.96
SMPDL3A-201ENST00000368440 KRTAP10-8P60410 259 aa9.04□□□□□ -0.96
SMPDL3A-201ENST00000368440 C6orf99Q4VX62 202 aa9.04□□□□□ -0.96
SMPDL3A-201ENST00000368440 TRAV23DV6A0A075B6W5 121 aa9.03□□□□□ -0.96
SMPDL3A-201ENST00000368440 SPRR1AP35321 89 aa9.03□□□□□ -0.96
SMPDL3A-201ENST00000368440 FAM218AQ96MZ4 157 aa9.03□□□□□ -0.96
SMPDL3A-201ENST00000368440 PRR26Q8N8Z3 221 aa9.02□□□□□ -0.96
SMPDL3A-201ENST00000368440 C9JAW5 83 aa9.02□□□□□ -0.97
SMPDL3A-201ENST00000368440 KRTAP4-16G5E9R7 235 aaPredicted RBP9.02□□□□□ -0.97
SMPDL3A-201ENST00000368440 LST1O00453 97 aa9.02□□□□□ -0.97
SMPDL3A-201ENST00000368440 ZNF73O43830 326 aaPredicted RBP8.99□□□□□ -0.97
SMPDL3A-201ENST00000368440 HIGD2AQ9BW72 106 aa8.99□□□□□ -0.97
SMPDL3A-201ENST00000368440 ETDCA0A1B0GVM5 59 aa8.98□□□□□ -0.97
SMPDL3A-201ENST00000368440 H0YGX0 51 aa8.98□□□□□ -0.97
SMPDL3A-201ENST00000368440 ANAPC11Q9NYG5 84 aa8.98□□□□□ -0.97
SMPDL3A-201ENST00000368440 PRO0461Q9UI25 63 aa8.98□□□□□ -0.97
SMPDL3A-201ENST00000368440 A0A087X002 238 aa8.96□□□□□ -0.97
SMPDL3A-201ENST00000368440 B5MCH6 92 aa8.96□□□□□ -0.97
SMPDL3A-201ENST00000368440 F8W1H4 67 aa8.96□□□□□ -0.97
SMPDL3A-201ENST00000368440 SLC25A20O43772 301 aa8.96□□□□□ -0.97
SMPDL3A-201ENST00000368440 SMCPP49901 116 aaPredicted RBP8.96□□□□□ -0.97
SMPDL3A-201ENST00000368440 SMCR5Q8TEV8 140 aa8.95□□□□□ -0.98
SMPDL3A-201ENST00000368440 DNAL4O96015 105 aa8.94□□□□□ -0.98
SMPDL3A-201ENST00000368440 COX7BP24311 80 aa8.94□□□□□ -0.98
SMPDL3A-201ENST00000368440 TRACP01848 142 aa8.94□□□□□ -0.98
SMPDL3A-201ENST00000368440 ETDBQ3ZM63 59 aa8.93□□□□□ -0.98
SMPDL3A-201ENST00000368440 Q6ZRX8 168 aa8.93□□□□□ -0.98
SMPDL3A-201ENST00000368440 Q9BRP9 147 aa8.93□□□□□ -0.98
SMPDL3A-201ENST00000368440 CBY1Q9Y3M2 126 aa8.92□□□□□ -0.98
SMPDL3A-201ENST00000368440 ERC2-IT1O76042 136 aa8.91□□□□□ -0.98
SMPDL3A-201ENST00000368440 LINC00575Q6W349 94 aa8.91□□□□□ -0.98
SMPDL3A-201ENST00000368440 ANKRD29Q8N6D5 301 aa8.91□□□□□ -0.98
SMPDL3A-201ENST00000368440 ELOF1P60002 83 aaKnown RBP8.91□□□□□ -0.98
SMPDL3A-201ENST00000368440 KRTAP13-2Q52LG2 175 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms