RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 C7orf65Q6ZTY9 151 aa7.68□□□□□ -1.18
SYNE1-204ENST00000367248 TEX15Q9BXT5 2789 aa7.68□□□□□ -1.18
SYNE1-204ENST00000367248 A0A1B0GW54 56 aa7.67□□□□□ -1.18
SYNE1-204ENST00000367248 SERTAD4-AS1Q5TG53 156 aa7.67□□□□□ -1.18
SYNE1-204ENST00000367248 V9GYY9 64 aa7.67□□□□□ -1.18
SYNE1-204ENST00000367248 A6NED7 52 aa7.67□□□□□ -1.18
SYNE1-204ENST00000367248 SMCPP49901 116 aaPredicted RBP7.67□□□□□ -1.18
SYNE1-204ENST00000367248 LINC00476Q8WZB0 136 aa7.67□□□□□ -1.18
SYNE1-204ENST00000367248 LAMA2P24043 3122 aaKnown RBP7.66□□□□□ -1.18
SYNE1-204ENST00000367248 CXCL6P80162 114 aa7.66□□□□□ -1.18
SYNE1-204ENST00000367248 C15orf56Q8N910 161 aa7.66□□□□□ -1.18
SYNE1-204ENST00000367248 IGLV6-57P01721 117 aa7.65□□□□□ -1.18
SYNE1-204ENST00000367248 LINC00313P59037 77 aa7.65□□□□□ -1.18
SYNE1-204ENST00000367248 CASC10Q5T4H9 136 aa7.65□□□□□ -1.18
SYNE1-204ENST00000367248 APLNQ9ULZ1 77 aa7.65□□□□□ -1.19
SYNE1-204ENST00000367248 LINC00336Q6ZUF6 198 aa7.64□□□□□ -1.19
SYNE1-204ENST00000367248 IGLV1-50A0A075B6I6 118 aa7.64□□□□□ -1.19
SYNE1-204ENST00000367248 PRO0461Q9UI25 63 aa7.64□□□□□ -1.19
SYNE1-204ENST00000367248 TMEM254Q8TBM7 123 aa7.63□□□□□ -1.19
SYNE1-204ENST00000367248 C9orf163Q8N9P6 203 aa7.63□□□□□ -1.19
SYNE1-204ENST00000367248 COL6A5A8TX70 2615 aa7.63□□□□□ -1.19
SYNE1-204ENST00000367248 LINC00528Q8N1L1 170 aa7.63□□□□□ -1.19
SYNE1-204ENST00000367248 TNP2Q05952 138 aa7.63□□□□□ -1.19
SYNE1-204ENST00000367248 KCNQ1DNQ9H478 68 aa7.62□□□□□ -1.19
SYNE1-204ENST00000367248 LINC00304Q8N9R0 145 aa7.62□□□□□ -1.19
SYNE1-204ENST00000367248 TRIOO75962 3097 aa7.61□□□□□ -1.19
SYNE1-204ENST00000367248 Q6ZQT0 140 aa7.61□□□□□ -1.19
SYNE1-204ENST00000367248 TRBV7-7A0A0K0K1E9 115 aa7.61□□□□□ -1.19
SYNE1-204ENST00000367248 LOC110117498A0A087WWA1 95 aa7.61□□□□□ -1.19
SYNE1-204ENST00000367248 EIF4EBP3O60516 100 aaPredicted RBP7.61□□□□□ -1.19
SYNE1-204ENST00000367248 DSPP15924 2871 aaKnown RBP7.6□□□□□ -1.19
SYNE1-204ENST00000367248 A0A0U1RQV1 116 aa7.6□□□□□ -1.19
SYNE1-204ENST00000367248 AKAP13Q12802 2813 aa7.6□□□□□ -1.19
SYNE1-204ENST00000367248 CDH23Q9H251 3354 aa7.59□□□□□ -1.19
SYNE1-204ENST00000367248 WIPF1O43516 503 aa7.59□□□□□ -1.19
SYNE1-204ENST00000367248 C1orf64Q8NEQ6 169 aa7.59□□□□□ -1.19
SYNE1-204ENST00000367248 SMIM29Q86T20 159 aa7.59□□□□□ -1.19
SYNE1-204ENST00000367248 A0A0G2JQZ4 141 aa7.58□□□□□ -1.2
SYNE1-204ENST00000367248 A0A1W2PNN7 141 aa7.58□□□□□ -1.2
SYNE1-204ENST00000367248 TRANK1O15050 2925 aa7.57□□□□□ -1.2
SYNE1-204ENST00000367248 TLX1NBP0CAT3 122 aa7.57□□□□□ -1.2
SYNE1-204ENST00000367248 C9orf129Q5T035 196 aaKnown RBP7.57□□□□□ -1.2
SYNE1-204ENST00000367248 SMIM26A0A096LP01 95 aa7.56□□□□□ -1.2
SYNE1-204ENST00000367248 TP53AIP1Q9HCN2 124 aa7.56□□□□□ -1.2
SYNE1-204ENST00000367248 OBSCN-AS1Q96MR7 158 aa7.55□□□□□ -1.2
SYNE1-204ENST00000367248 IGSF10Q6WRI0 2623 aa7.55□□□□□ -1.2
SYNE1-204ENST00000367248 TRBV7-4A0A0J9YYF1 115 aa7.55□□□□□ -1.2
SYNE1-204ENST00000367248 ZNF861PO60384 105 aa7.55□□□□□ -1.2
SYNE1-204ENST00000367248 ZNF575Q86XF7 245 aa7.55□□□□□ -1.2
SYNE1-204ENST00000367248 PSORS1C2Q9UIG4 136 aa7.53□□□□□ -1.2
SYNE1-204ENST00000367248 DSCR10P59022 87 aa7.53□□□□□ -1.2
SYNE1-204ENST00000367248 CNBPP62633 177 aaKnown RBP7.53□□□□□ -1.2
SYNE1-204ENST00000367248 CHD6Q8TD26 2715 aa7.52□□□□□ -1.2
SYNE1-204ENST00000367248 MAP1AP78559 2803 aaPredicted RBP7.52□□□□□ -1.21
SYNE1-204ENST00000367248 REV3LO60673 3130 aa7.52□□□□□ -1.21
SYNE1-204ENST00000367248 IGLV8-61A0A075B6I0 122 aa7.51□□□□□ -1.21
SYNE1-204ENST00000367248 PLA2G2DQ9UNK4 145 aa7.51□□□□□ -1.21
SYNE1-204ENST00000367248 NOTCH1P46531 2555 aa7.51□□□□□ -1.21
SYNE1-204ENST00000367248 SSBP3-AS1Q7Z2R9 100 aa7.5□□□□□ -1.21
SYNE1-204ENST00000367248 IGLV7-43P04211 117 aa7.5□□□□□ -1.21
SYNE1-204ENST00000367248 PSPHP1O15172 72 aa7.49□□□□□ -1.21
SYNE1-204ENST00000367248 VPS13AQ96RL7 3174 aa7.47□□□□□ -1.21
SYNE1-204ENST00000367248 IGFL1Q6UW32 110 aa7.47□□□□□ -1.21
SYNE1-204ENST00000367248 SZT2Q5T011 3432 aa7.46□□□□□ -1.22
SYNE1-204ENST00000367248 C8orf87E5RJ46 101 aa7.46□□□□□ -1.22
SYNE1-204ENST00000367248 TRAV22A0A0B4J277 110 aa7.46□□□□□ -1.22
SYNE1-204ENST00000367248 A8MWP4 228 aa7.45□□□□□ -1.22
SYNE1-204ENST00000367248 CELSR3Q9NYQ7 3312 aa7.45□□□□□ -1.22
SYNE1-204ENST00000367248 Q8N377 158 aa7.45□□□□□ -1.22
SYNE1-204ENST00000367248 FRYQ5TBA9 3013 aa7.44□□□□□ -1.22
SYNE1-204ENST00000367248 H3BPC8 53 aa7.44□□□□□ -1.22
SYNE1-204ENST00000367248 SPAG11AQ6PDA7 123 aa7.44□□□□□ -1.22
SYNE1-204ENST00000367248 M0R2T5 61 aa7.43□□□□□ -1.22
SYNE1-204ENST00000367248 CR1P17927 2039 aa7.42□□□□□ -1.22
SYNE1-204ENST00000367248 PRR26Q8N8Z3 221 aa7.42□□□□□ -1.22
SYNE1-204ENST00000367248 IGLV5-37A0A075B6J1 123 aa7.42□□□□□ -1.22
SYNE1-204ENST00000367248 NBEAL1Q6ZS30 2694 aa7.42□□□□□ -1.22
SYNE1-204ENST00000367248 K7EQZ3 153 aa7.42□□□□□ -1.22
SYNE1-204ENST00000367248 MRPL34Q9BQ48 92 aaKnown RBP7.41□□□□□ -1.22
SYNE1-204ENST00000367248 GCN1Q92616 2671 aaKnown RBP7.41□□□□□ -1.22
SYNE1-204ENST00000367248 SPRR4Q96PI1 79 aa7.4□□□□□ -1.22
SYNE1-204ENST00000367248 ERC2-IT1O76042 136 aa7.4□□□□□ -1.22
SYNE1-204ENST00000367248 UBR5O95071 2799 aaPredicted RBP7.4□□□□□ -1.22
SYNE1-204ENST00000367248 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.4□□□□□ -1.22
SYNE1-204ENST00000367248 ACYP2P14621 99 aa7.4□□□□□ -1.23
SYNE1-204ENST00000367248 A0A1B0GU69 56 aa7.39□□□□□ -1.23
SYNE1-204ENST00000367248 LOC101927531A0A1B0GV80 90 aa7.39□□□□□ -1.23
SYNE1-204ENST00000367248 FAM104AQ969W3 186 aa7.37□□□□□ -1.23
SYNE1-204ENST00000367248 LINC01554Q52M75 96 aa7.37□□□□□ -1.23
SYNE1-204ENST00000367248 PRR15Q8IV56 129 aa7.37□□□□□ -1.23
SYNE1-204ENST00000367248 C8orf17Q9NRJ1 99 aa7.37□□□□□ -1.23
SYNE1-204ENST00000367248 RBM12B-AS1Q9P1G2 102 aa7.35□□□□□ -1.23
SYNE1-204ENST00000367248 COL6A3P12111 3177 aa7.35□□□□□ -1.23
SYNE1-204ENST00000367248 IGLV7-46A0A075B6I9 117 aa7.35□□□□□ -1.23
SYNE1-204ENST00000367248 A0A1B0GVX0 72 aa7.34□□□□□ -1.23
SYNE1-204ENST00000367248 A0A1W2PNM2 257 aa7.34□□□□□ -1.23
SYNE1-204ENST00000367248 NSD1Q96L73 2696 aaPredicted RBP7.33□□□□□ -1.24
SYNE1-204ENST00000367248 Q6ZSA8 131 aa7.33□□□□□ -1.24
SYNE1-204ENST00000367248 VCANP13611 3396 aa7.32□□□□□ -1.24
SYNE1-204ENST00000367248 FLNCQ14315 2725 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms