RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 TPRP12270 2363 aaKnown RBP0.63□□□□□ -2.31
RNU6-1249P-201ENST00000363237 ZNF292O60281 2723 aa0.63□□□□□ -2.31
RNU6-1249P-201ENST00000363237 H3BVH4 76 aa0.63□□□□□ -2.31
RNU6-1249P-201ENST00000363237 NDUFA4O00483 81 aa0.63□□□□□ -2.31
RNU6-1249P-201ENST00000363237 H1FX-AS1Q4G0G2 97 aa0.63□□□□□ -2.31
RNU6-1249P-201ENST00000363237 CDKN2A-AS1Q9UH64 79 aa0.63□□□□□ -2.31
RNU6-1249P-201ENST00000363237 ASXL1Q8IXJ9 1541 aa0.63□□□□□ -2.31
RNU6-1249P-201ENST00000363237 U3KQA8 63 aa0.62□□□□□ -2.31
RNU6-1249P-201ENST00000363237 EFCAB5A4FU69 1503 aa0.62□□□□□ -2.31
RNU6-1249P-201ENST00000363237 INO80Q9ULG1 1556 aaPredicted RBP0.62□□□□□ -2.31
RNU6-1249P-201ENST00000363237 ERICH3Q5RHP9 1530 aa0.61□□□□□ -2.31
RNU6-1249P-201ENST00000363237 KLK9Q2XQG4 91 aa0.61□□□□□ -2.31
RNU6-1249P-201ENST00000363237 TJP1Q07157 1748 aa0.61□□□□□ -2.31
RNU6-1249P-201ENST00000363237 RALGAPBQ86X10 1494 aa0.61□□□□□ -2.31
RNU6-1249P-201ENST00000363237 THOC2Q8NI27 1593 aaKnown RBP0.6□□□□□ -2.31
RNU6-1249P-201ENST00000363237 MADDQ8WXG6 1647 aa0.6□□□□□ -2.31
RNU6-1249P-201ENST00000363237 CCDC180Q9P1Z9 1646 aa0.6□□□□□ -2.31
RNU6-1249P-201ENST00000363237 HFM1A2PYH4 1435 aa0.59□□□□□ -2.31
RNU6-1249P-201ENST00000363237 PKDREJQ9NTG1 2253 aa0.59□□□□□ -2.32
RNU6-1249P-201ENST00000363237 DIP2AQ14689 1571 aa0.58□□□□□ -2.32
RNU6-1249P-201ENST00000363237 RNF17Q9BXT8 1623 aaKnown RBP0.58□□□□□ -2.32
RNU6-1249P-201ENST00000363237 SMIM31A0A1B0GVY4 71 aa0.58□□□□□ -2.32
RNU6-1249P-201ENST00000363237 ATXN8Q156A1 80 aa0.58□□□□□ -2.32
RNU6-1249P-201ENST00000363237 CSMD3Q7Z407 3707 aa0.57□□□□□ -2.32
RNU6-1249P-201ENST00000363237 HILPDAQ9Y5L2 63 aa0.57□□□□□ -2.32
RNU6-1249P-201ENST00000363237 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.56□□□□□ -2.32
RNU6-1249P-201ENST00000363237 NDUFA3O95167 84 aa0.56□□□□□ -2.32
RNU6-1249P-201ENST00000363237 LELP1Q5T871 98 aa0.56□□□□□ -2.32
RNU6-1249P-201ENST00000363237 SPTBN1Q01082 2364 aaKnown RBP0.55□□□□□ -2.32
RNU6-1249P-201ENST00000363237 WFDC13Q8IUB5 93 aa0.55□□□□□ -2.32
RNU6-1249P-201ENST00000363237 UBL5Q9BZL1 73 aa0.55□□□□□ -2.32
RNU6-1249P-201ENST00000363237 GNG13Q9P2W3 67 aa0.55□□□□□ -2.32
RNU6-1249P-201ENST00000363237 CNOT1A5YKK6 2376 aaKnown RBP0.55□□□□□ -2.32
RNU6-1249P-201ENST00000363237 MUC16Q8WXI7 14507 aa0.54□□□□□ -2.32
RNU6-1249P-201ENST00000363237 PLXNC1O60486 1568 aa0.54□□□□□ -2.32
RNU6-1249P-201ENST00000363237 DEPDC5O75140 1603 aa0.54□□□□□ -2.32
RNU6-1249P-201ENST00000363237 PIEZO1Q92508 2521 aa0.54□□□□□ -2.32
RNU6-1249P-201ENST00000363237 MRPL33O75394 65 aaKnown RBP0.54□□□□□ -2.32
RNU6-1249P-201ENST00000363237 C3orf79P0CE67 100 aa0.54□□□□□ -2.32
RNU6-1249P-201ENST00000363237 KRTAP21-1Q3LI58 79 aa0.54□□□□□ -2.32
RNU6-1249P-201ENST00000363237 KCNQ1DNQ9H478 68 aa0.54□□□□□ -2.32
RNU6-1249P-201ENST00000363237 A0A087WWC5 75 aa0.53□□□□□ -2.32
RNU6-1249P-201ENST00000363237 KRTAP5-10Q6L8G5 202 aa0.53□□□□□ -2.32
RNU6-1249P-201ENST00000363237 ENHOQ6UWT2 76 aa0.53□□□□□ -2.32
RNU6-1249P-201ENST00000363237 PRO3102Q9H379 93 aa0.53□□□□□ -2.32
RNU6-1249P-201ENST00000363237 VWFP04275 2813 aa0.53□□□□□ -2.32
RNU6-1249P-201ENST00000363237 C3P01024 1663 aa0.53□□□□□ -2.33
RNU6-1249P-201ENST00000363237 AKAP6Q13023 2319 aa0.52□□□□□ -2.33
RNU6-1249P-201ENST00000363237 DEFB131BA0A096LNP1 70 aa0.52□□□□□ -2.33
RNU6-1249P-201ENST00000363237 OTOGQ6ZRI0 2925 aa0.51□□□□□ -2.33
RNU6-1249P-201ENST00000363237 TIAM1Q13009 1591 aa0.51□□□□□ -2.33
RNU6-1249P-201ENST00000363237 TENM4Q6N022 2769 aa0.51□□□□□ -2.33
RNU6-1249P-201ENST00000363237 WNK2Q9Y3S1 2297 aa0.5□□□□□ -2.33
RNU6-1249P-201ENST00000363237 GVINP1Q7Z2Y8 2422 aa0.49□□□□□ -2.33
RNU6-1249P-201ENST00000363237 LOC730098B7Z3J9 87 aa0.49□□□□□ -2.33
RNU6-1249P-201ENST00000363237 LINC00158P58513 81 aa0.49□□□□□ -2.33
RNU6-1249P-201ENST00000363237 ABCA6Q8N139 1617 aa0.49□□□□□ -2.33
RNU6-1249P-201ENST00000363237 IGF2RP11717 2491 aa0.48□□□□□ -2.33
RNU6-1249P-201ENST00000363237 AHNAKQ09666 5890 aaKnown RBP0.47□□□□□ -2.33
RNU6-1249P-201ENST00000363237 LRP1Q07954 4544 aaKnown RBP0.47□□□□□ -2.33
RNU6-1249P-201ENST00000363237 DEFB114Q30KQ6 69 aa0.47□□□□□ -2.33
RNU6-1249P-201ENST00000363237 NCOR1O75376 2440 aa0.47□□□□□ -2.33
RNU6-1249P-201ENST00000363237 NAV2Q8IVL1 2488 aa0.45□□□□□ -2.34
RNU6-1249P-201ENST00000363237 ETDCA0A1B0GVM5 59 aa0.45□□□□□ -2.34
RNU6-1249P-201ENST00000363237 H0YAA0 97 aa0.45□□□□□ -2.34
RNU6-1249P-201ENST00000363237 S100ZQ8WXG8 99 aa0.45□□□□□ -2.34
RNU6-1249P-201ENST00000363237 CSPG4Q6UVK1 2322 aa0.45□□□□□ -2.34
RNU6-1249P-201ENST00000363237 ZFYVE26Q68DK2 2539 aa0.45□□□□□ -2.34
RNU6-1249P-201ENST00000363237 TENM3Q9P273 2699 aa0.45□□□□□ -2.34
RNU6-1249P-201ENST00000363237 LY75O60449 1722 aa0.44□□□□□ -2.34
RNU6-1249P-201ENST00000363237 ABCC6O95255 1503 aa0.44□□□□□ -2.34
RNU6-1249P-201ENST00000363237 KIAA0586Q9BVV6 1533 aa0.44□□□□□ -2.34
RNU6-1249P-201ENST00000363237 USP24Q9UPU5 2620 aa0.44□□□□□ -2.34
RNU6-1249P-201ENST00000363237 LYNX1G3V0Z9 82 aa0.44□□□□□ -2.34
RNU6-1249P-201ENST00000363237 M0R2T5 61 aa0.44□□□□□ -2.34
RNU6-1249P-201ENST00000363237 SYNE1Q8NF91 8797 aaKnown RBP0.44□□□□□ -2.34
RNU6-1249P-201ENST00000363237 BSNQ9UPA5 3926 aa0.44□□□□□ -2.34
RNU6-1249P-201ENST00000363237 UNC79Q9P2D8 2635 aa0.43□□□□□ -2.34
RNU6-1249P-201ENST00000363237 LINC01549A6NIU2 74 aa0.43□□□□□ -2.34
RNU6-1249P-201ENST00000363237 PRM1P04553 51 aa0.43□□□□□ -2.34
RNU6-1249P-201ENST00000363237 HUWE1Q7Z6Z7 4374 aaKnown RBP0.42□□□□□ -2.34
RNU6-1249P-201ENST00000363237 ABCA10Q8WWZ4 1543 aa0.42□□□□□ -2.34
RNU6-1249P-201ENST00000363237 CHD6Q8TD26 2715 aa0.42□□□□□ -2.34
RNU6-1249P-201ENST00000363237 FAT2Q9NYQ8 4349 aa0.42□□□□□ -2.34
RNU6-1249P-201ENST00000363237 KIF1AQ12756 1690 aa0.41□□□□□ -2.34
RNU6-1249P-201ENST00000363237 ALS2Q96Q42 1657 aa0.41□□□□□ -2.34
RNU6-1249P-201ENST00000363237 DEFB135Q30KP9 77 aa0.41□□□□□ -2.34
RNU6-1249P-201ENST00000363237 GLI2P10070 1586 aa0.4□□□□□ -2.34
RNU6-1249P-201ENST00000363237 BPTFQ12830 3046 aa0.4□□□□□ -2.34
RNU6-1249P-201ENST00000363237 TNXBP22105 4242 aa0.4□□□□□ -2.34
RNU6-1249P-201ENST00000363237 CRIP1P50238 77 aa0.4□□□□□ -2.35
RNU6-1249P-201ENST00000363237 MUC5BQ9HC84 5762 aaPredicted RBP0.4□□□□□ -2.35
RNU6-1249P-201ENST00000363237 NCOR2Q9Y618 2525 aa0.39□□□□□ -2.35
RNU6-1249P-201ENST00000363237 REV3LO60673 3130 aa0.39□□□□□ -2.35
RNU6-1249P-201ENST00000363237 PHGR1C9JFL3 82 aa0.39□□□□□ -2.35
RNU6-1249P-201ENST00000363237 PRKDCP78527 4128 aaKnown RBP0.39□□□□□ -2.35
RNU6-1249P-201ENST00000363237 ABCA2Q9BZC7 2435 aa0.39□□□□□ -2.35
RNU6-1249P-201ENST00000363237 MYCBP2O75592 4640 aa0.38□□□□□ -2.35
RNU6-1249P-201ENST00000363237 SFTA3P0C7M3 94 aa0.38□□□□□ -2.35
RNU6-1249P-201ENST00000363237 SPRR2DP22532 72 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms