RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 TRAV22A0A0B4J277 110 aa8.87□□□□□ -0.99
LDB3-202ENST00000361373 WIPF1O43516 503 aa8.86□□□□□ -0.99
LDB3-202ENST00000361373 A0A0U1RQV1 116 aa8.86□□□□□ -0.99
LDB3-202ENST00000361373 CNBPP62633 177 aaKnown RBP8.86□□□□□ -0.99
LDB3-202ENST00000361373 CFAP46Q8IYW2 2715 aa8.85□□□□□ -0.99
LDB3-202ENST00000361373 A8MWP4 228 aa8.85□□□□□ -0.99
LDB3-202ENST00000361373 C7orf65Q6ZTY9 151 aa8.85□□□□□ -0.99
LDB3-202ENST00000361373 ZNF575Q86XF7 245 aa8.84□□□□□ -0.99
LDB3-202ENST00000361373 CHD7Q9P2D1 2997 aa8.83□□□□□ -1
LDB3-202ENST00000361373 C9orf129Q5T035 196 aaKnown RBP8.83□□□□□ -1
LDB3-202ENST00000361373 LOC101927531A0A1B0GV80 90 aa8.82□□□□□ -1
LDB3-202ENST00000361373 CEP350Q5VT06 3117 aa8.81□□□□□ -1
LDB3-202ENST00000361373 ATP11AUNQ6ZP68 121 aa8.81□□□□□ -1
LDB3-202ENST00000361373 J3QL48 77 aa8.81□□□□□ -1
LDB3-202ENST00000361373 MRPL34Q9BQ48 92 aaKnown RBP8.79□□□□□ -1
LDB3-202ENST00000361373 Q96NJ1 140 aa8.78□□□□□ -1
LDB3-202ENST00000361373 IGFL1Q6UW32 110 aa8.78□□□□□ -1
LDB3-202ENST00000361373 LINC00304Q8N9R0 145 aa8.78□□□□□ -1
LDB3-202ENST00000361373 EIF4EBP3O60516 100 aaPredicted RBP8.77□□□□□ -1.01
LDB3-202ENST00000361373 CHD9Q3L8U1 2897 aa8.77□□□□□ -1.01
LDB3-202ENST00000361373 ERC2-IT1O76042 136 aa8.76□□□□□ -1.01
LDB3-202ENST00000361373 Q8N377 158 aa8.76□□□□□ -1.01
LDB3-202ENST00000361373 PSPHP1O15172 72 aa8.75□□□□□ -1.01
LDB3-202ENST00000361373 CENPEQ02224 2701 aa8.75□□□□□ -1.01
LDB3-202ENST00000361373 IGLV7-43P04211 117 aa8.75□□□□□ -1.01
LDB3-202ENST00000361373 ZNF292O60281 2723 aa8.75□□□□□ -1.01
LDB3-202ENST00000361373 BPTFQ12830 3046 aa8.75□□□□□ -1.01
LDB3-202ENST00000361373 IGLV5-37A0A075B6J1 123 aa8.74□□□□□ -1.01
LDB3-202ENST00000361373 A0A1B0GU69 56 aa8.74□□□□□ -1.01
LDB3-202ENST00000361373 PMAIP1Q13794 54 aa8.74□□□□□ -1.01
LDB3-202ENST00000361373 PRR15Q8IV56 129 aa8.73□□□□□ -1.01
LDB3-202ENST00000361373 K7EQZ3 153 aa8.72□□□□□ -1.01
LDB3-202ENST00000361373 C1orf195Q5TG92 126 aa8.72□□□□□ -1.01
LDB3-202ENST00000361373 PSORS1C2Q9UIG4 136 aa8.71□□□□□ -1.01
LDB3-202ENST00000361373 A0A1W2PNN7 141 aa8.71□□□□□ -1.02
LDB3-202ENST00000361373 RPS28P62857 69 aaKnown RBP8.7□□□□□ -1.02
LDB3-202ENST00000361373 C8orf17Q9NRJ1 99 aa8.7□□□□□ -1.02
LDB3-202ENST00000361373 SPRR4Q96PI1 79 aa8.69□□□□□ -1.02
LDB3-202ENST00000361373 A0A1B0GVX0 72 aa8.69□□□□□ -1.02
LDB3-202ENST00000361373 CASC10Q5T4H9 136 aa8.69□□□□□ -1.02
LDB3-202ENST00000361373 UTRNP46939 3433 aa8.65□□□□□ -1.02
LDB3-202ENST00000361373 SMR3BP02814 79 aaPredicted RBP8.64□□□□□ -1.03
LDB3-202ENST00000361373 TRANK1O15050 2925 aa8.63□□□□□ -1.03
LDB3-202ENST00000361373 DSCR10P59022 87 aa8.61□□□□□ -1.03
LDB3-202ENST00000361373 IGLV5-48A0A075B6I7 105 aa8.61□□□□□ -1.03
LDB3-202ENST00000361373 STAB1Q9NY15 2570 aa8.59□□□□□ -1.03
LDB3-202ENST00000361373 CR1P17927 2039 aa8.59□□□□□ -1.03
LDB3-202ENST00000361373 TNP2Q05952 138 aa8.59□□□□□ -1.03
LDB3-202ENST00000361373 OBSCN-AS1Q96MR7 158 aa8.59□□□□□ -1.04
LDB3-202ENST00000361373 HTTP42858 3142 aa8.58□□□□□ -1.04
LDB3-202ENST00000361373 CD164Q04900 197 aa8.58□□□□□ -1.04
LDB3-202ENST00000361373 A0A1W2PNM2 257 aa8.57□□□□□ -1.04
LDB3-202ENST00000361373 COX6B2Q6YFQ2 88 aa8.56□□□□□ -1.04
LDB3-202ENST00000361373 KLKP1Q107X0 134 aa8.55□□□□□ -1.04
LDB3-202ENST00000361373 ANAPC11Q9NYG5 84 aa8.55□□□□□ -1.04
LDB3-202ENST00000361373 RANBP2P49792 3224 aaKnown RBP8.54□□□□□ -1.04
LDB3-202ENST00000361373 TEP1Q99973 2627 aaKnown RBP8.54□□□□□ -1.04
LDB3-202ENST00000361373 UNC79Q9P2D8 2635 aa8.54□□□□□ -1.04
LDB3-202ENST00000361373 SETXQ7Z333 2677 aaKnown RBP8.52□□□□□ -1.05
LDB3-202ENST00000361373 FAM104AQ969W3 186 aa8.52□□□□□ -1.05
LDB3-202ENST00000361373 LINC01600Q96MT4 127 aa8.52□□□□□ -1.05
LDB3-202ENST00000361373 PRO0628Q9UI54 55 aa8.52□□□□□ -1.05
LDB3-202ENST00000361373 COA5Q86WW8 74 aa8.52□□□□□ -1.05
LDB3-202ENST00000361373 FAM229BQ4G0N7 80 aa8.51□□□□□ -1.05
LDB3-202ENST00000361373 COL6A5A8TX70 2615 aa8.51□□□□□ -1.05
LDB3-202ENST00000361373 A0A0G2JQZ4 141 aa8.51□□□□□ -1.05
LDB3-202ENST00000361373 C5orf42Q9H799 3197 aa8.51□□□□□ -1.05
LDB3-202ENST00000361373 C9orf92A6NGG3 77 aa8.5□□□□□ -1.05
LDB3-202ENST00000361373 TEX15Q9BXT5 2789 aa8.49□□□□□ -1.05
LDB3-202ENST00000361373 CYP4F30PQ9H0H9 118 aa8.49□□□□□ -1.05
LDB3-202ENST00000361373 PLAC8Q9NZF1 115 aa8.48□□□□□ -1.05
LDB3-202ENST00000361373 RBM12B-AS1Q9P1G2 102 aa8.48□□□□□ -1.05
LDB3-202ENST00000361373 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.48□□□□□ -1.05
LDB3-202ENST00000361373 MGAQ8IWI9 3026 aa8.46□□□□□ -1.06
LDB3-202ENST00000361373 UQCR11O14957 56 aa8.45□□□□□ -1.06
LDB3-202ENST00000361373 AKAP13Q12802 2813 aa8.44□□□□□ -1.06
LDB3-202ENST00000361373 IGSF10Q6WRI0 2623 aa8.43□□□□□ -1.06
LDB3-202ENST00000361373 SPRR1AP35321 89 aa8.43□□□□□ -1.06
LDB3-202ENST00000361373 SPANXA2-OT1Q8N9U9 137 aa8.43□□□□□ -1.06
LDB3-202ENST00000361373 CHD6Q8TD26 2715 aa8.42□□□□□ -1.06
LDB3-202ENST00000361373 IGLV8-61A0A075B6I0 122 aa8.4□□□□□ -1.06
LDB3-202ENST00000361373 C4orf26Q17RF5 130 aa8.38□□□□□ -1.07
LDB3-202ENST00000361373 BAHCC1Q9P281 2608 aa8.38□□□□□ -1.07
LDB3-202ENST00000361373 H7BZZ5 65 aa8.38□□□□□ -1.07
LDB3-202ENST00000361373 SPRR1BP22528 89 aa8.36□□□□□ -1.07
LDB3-202ENST00000361373 IGLV7-46A0A075B6I9 117 aa8.36□□□□□ -1.07
LDB3-202ENST00000361373 PRR26Q8N8Z3 221 aa8.36□□□□□ -1.07
LDB3-202ENST00000361373 A8MUN3 132 aa8.35□□□□□ -1.07
LDB3-202ENST00000361373 NOTCH1P46531 2555 aa8.35□□□□□ -1.07
LDB3-202ENST00000361373 DSPP15924 2871 aaKnown RBP8.34□□□□□ -1.07
LDB3-202ENST00000361373 LCE6AA0A183 80 aa8.32□□□□□ -1.08
LDB3-202ENST00000361373 Q6ZSA8 131 aa8.32□□□□□ -1.08
LDB3-202ENST00000361373 PCNTO95613 3336 aa8.32□□□□□ -1.08
LDB3-202ENST00000361373 KRTAP26-1Q6PEX3 210 aa8.31□□□□□ -1.08
LDB3-202ENST00000361373 OCR1Q9BZK8 76 aa8.31□□□□□ -1.08
LDB3-202ENST00000361373 NBEAL1Q6ZS30 2694 aa8.3□□□□□ -1.08
LDB3-202ENST00000361373 MIR22HGQ0VDD5 57 aa8.3□□□□□ -1.08
LDB3-202ENST00000361373 KRTAP1-5Q9BYS1 174 aa8.3□□□□□ -1.08
LDB3-202ENST00000361373 LAMA3Q16787 3333 aa8.27□□□□□ -1.09
LDB3-202ENST00000361373 Q8NDZ9 215 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms